Caretta caretta (Loggerhead turtle): 125621521
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Entry
125621521 CDS
T09292
Name
(RefSeq) small nuclear ribonucleoprotein F-like
KO
K11098
small nuclear ribonucleoprotein F
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125621521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125621521
03041 Spliceosome [BR:
ccay03041
]
125621521
03032 DNA replication proteins [BR:
ccay03032
]
125621521
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
125621521
Spliceosome [BR:
ccay03041
]
Complex A
U1 snRNP components
Sm proteins
125621521
U2 snRNP components
125621521
Complex B
U1 snRNP components
125621521
U4/U6.U5 tri-snRNP components
125621521
Complex C
U2 snRNP components
125621521
DNA replication proteins [BR:
ccay03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
125621521
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF5054
DUF7724
Motif
Other DBs
NCBI-GeneID:
125621521
NCBI-ProteinID:
XP_048674324
LinkDB
All DBs
Position
13:complement(18986997..18987245)
Genome browser
AA seq
82 aa
AA seq
DB search
MSLPLNPKPFLNRLMGKLVMVKLKWGMDYKGYLVSVDGYMNMQLANTEEYIDGALSGHLD
EVLIRCNNVPYIRGVEEDDDNE
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgcccctgaaccccaagcccttcctgaataggctgatggggaagctggtgatg
gtgaagctgaagtgggggatggactacaagggctacctggtgtctgtcgacggctacatg
aacatgcagcttgcaaacacagaagaatacatagatggtgcattgtcaggacaccttgat
gaagttttgataagatgtaacaatgtcccgtacatcagaggagtagaagaagatgatgat
aatgaataa
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