Caretta caretta (Loggerhead turtle): 125621742
Help
Entry
125621742 CDS
T09292
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125621742 (CPSF4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125621742 (CPSF4L)
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125621742 (CPSF4L)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125621742 (CPSF4L)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125621742 (CPSF4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCCH_4
zf-CCHC
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
125621742
NCBI-ProteinID:
XP_048674926
LinkDB
All DBs
Position
13:complement(34175508..34183112)
Genome browser
AA seq
314 aa
AA seq
DB search
MRGREFVAGPFFNPIPQLGLFSLLEAHGEGWPGSTLGLGLGWGYLPSPADWEDMQELIAG
VEKLMFNLERDVEHQRGALLLPFPGMDKSGASVCEFFLRGLCAKGLMCPFRHIHGEKTVV
CKHWLRGLCKRGDQCEFLHEYDMTKMPECYFYSKFGECSNRECPFLHLDPASRIKDCPWY
DRGFCKQGPLCKYKHTRRVMCVNYLAGFCPEGPKCKFMHPKADLMPCNSDVSQGLPPPSQ
AADSKSIHEQQAPQVLLLSHQPGARAAQCQREEAGGYPYGMLRPLGQVTCFKCGDKGHYA
NKCSKSRLGIQLGK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagagggagggaatttgtagctggccccttcttcaatcccattcctcagctggggctc
ttcagcctgcttgaggcacacggggaaggctggccgggctctactctgggtctggggctt
ggctgggggtatctcccgagtcccgctgactgggaggacatgcaggagctcattgctggg
gtggagaagctcatgttcaatttagagcgggacgtggagcaccagcgaggggccctgctc
ctgcccttcccaggcatggacaagtcgggggcgtccgtgtgtgagttcttcctccgagga
ctgtgcgcgaagggcctgatgtgtcctttccggcacatccacggtgagaagacggtggtg
tgtaagcactggctgcgggggctgtgcaagcgaggagaccagtgcgagttcttgcacgag
tacgacatgaccaagatgccggagtgttatttctactccaagtttggtgagtgcagcaat
agagagtgccccttcctgcaccttgatccagcgtccagaattaaagactgtccctggtat
gacagagggttctgcaaacagggtcctctgtgtaaatacaaacacaccaggagggtgatg
tgtgtcaactacttagctggcttctgccccgaaggacccaaatgcaaattcatgcacccc
aaggcagacctgatgccgtgtaactcagatgtctcccaggggctgccgccaccatcccag
gctgctgacagcaagagcattcacgagcagcaggccccgcaagtcctgttgctttctcat
cagcctggggctagggctgcccaatgccagagggaggaggctggtggctacccctatgga
atgctccggccccttgggcaggtcacatgcttcaagtgtggagataagggtcactatgcc
aacaaatgcagcaagagtcggctgggaatccaactggggaaatga
DBGET
integrated database retrieval system
