Caretta caretta (Loggerhead turtle): 125621748
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Entry
125621748 CDS
T09292
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04020
Calcium signaling pathway
ccay04080
Neuroactive ligand-receptor interaction
ccay04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125621748 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125621748 (GRIN2C)
04082 Neuroactive ligand signaling
125621748 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125621748 (GRIN2C)
Ion channels [BR:
ccay04040
]
Ligand-gated channels
Glutamate (ionotropic)
125621748 (GRIN2C)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
125621748
NCBI-ProteinID:
XP_048674941
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All DBs
Position
13:23808177..23863210
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AA seq
1386 aa
AA seq
DB search
MGRALTHTLVLSMVLGCSAVILDLLLPGPGEPVVNVAVVFGGSSYPLHVRSRLTHQSFLD
LPLEIHPVTVIVNDTNPSTLLTQICNILASTKIHGIVFEDNIGTEAVAQILDFVSSQTQV
PIISISGGSAVVLTPKEPDSAFLQLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGYNI
FVDVIRSFTDASYFGWELQDVLTFEMTQDGSNSKTQRLLRQIDAQVMIVYCSREEAVYLF
QVAEQAGLVGPGYIWIVPSLTVGNMEIPPASFPVGLISVVTESWKMSLRQKVQDGMAIIA
TGAESYFRTHGYLPDVGKDCKTPPTTTANRTFYRHLLNVTWEHRDFSFNEAGYLVRPTMV
VISLNRHRLWEMVGKWEKGIIHMKYPVWPRYGSFLQPVSDNRHLTVATLEERPFVIVENT
DPASGVCVRNTVPCRKQTNYTDSGDGPVDPYTKLCCKGFCIDILKKLAKAVKFSYDLYLV
TNGKHGKIVRGIWNGMIGEVYYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARS
NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVGYNQNLTSGKKSGGPSFT
IGKSVWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYID
TVSGLSDKKFQRPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMMKYNQRSVEDALTSL
KMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSKWKRPIDLALL
QFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHL
VYWKLRHSVPKSHKLDFLLAISRGIYSCFSGVQNLESPVRVRTPDVTANSAQANVLKMLQ
AAKDMVSTASVGSSLENATRTIENWTNQSENLQTTFSLRTPQLVVQNTSVSNRPPYSSNV
AATEKLGRDCAQRAVPPPIPAPQQPFVDSRLPANENWRAVNEQPPVLHPLKFRGSYSGDK
VLPGSTMGGFPHLLVRTMLPSHFGSHMPLGNHLSTPLSPLKTQRELPLPDIYKEHKHPVS
RGEGKEKLPPNVHLVYGEGGHRDPTQLAKLFSTSEKNPFLPPDCMNSSFSKADRPCRRLA
TVFREPEPVELPFLGKEKLNRRASLLRSAWEQNEKYRSLGIRRYDGKSSTRGDVPDLFPK
AGVALRQTPMYYPTEALGSSAMCKRKHVEANSRLPWKAQRFLHPQAVRLPSYGEACLQNA
TGVHRASSTVVHKQYAYMNSYMNLPMYLGRLYQGPPPLCEYSRTSQRCVTRAPWAPRSRD
YLIQEDSRRTMYFDSVYRDCTERSRAEPSFLQMVNTERRDLLAAQRMNSPCAAQSWRRIS
SLESEV
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagctctgacgcacactctggtactgtccatggtgctgggctgttcagctgtc
atactggatctcctgctgccgggccctggggagccagtggtaaatgtggccgtggtgttt
gggggctcctcataccctctccacgtccgcagccggctgactcaccagagcttcctggac
ctgcctctggagatccacccggtcacggtgattgtgaatgacaccaaccccagcaccctc
ctgacccagatctgcaacatcctcgccagcaccaagatccacggcatcgtatttgaggac
aacatcggcacagaggctgtggcacagattctggacttcgtatcctcccagacccaggtc
cccatcatcagtatcagtgggggctctgccgtggtcctgacccccaaggagcccgactct
gccttcctgcagctgggagtctccattgagcagcagatccaggtgatcttcaaagtcctg
gaggaatatgactggggctcctttgcggtcatcaccagcctgtacccagggtacaacatc
ttcgtggacgttatccgttccttcacggacgccagctactttggttgggaactccaggac
gtcctgacctttgagatgacccaggatgggagcaactccaaaacccagcggctgctacgg
cagattgatgcccaggtgatgattgtgtactgctcgcgggaggaggctgtgtacctcttc
caggtggcggagcaggcgggcttggtcgggcccggctacatctggattgtgccaagcctg
acggtggggaacatggagatcccacctgcctctttccccgtcggcctcatcagcgtggtg
accgagagctggaagatgagcctgaggcagaaggttcaggatggcatggccatcatcgcc
acgggggctgagagctacttcaggacccacgggtacctcccagacgtgggcaaggactgt
aagacgccgcctaccaccaccgccaacagaactttctacaggcacctgctgaatgtgacg
tgggagcacagggacttctccttcaatgaagctggttacttggtgaggccaaccatggtg
gtgatctcactgaaccggcatcggctctgggagatggtggggaaatgggagaaggggatc
atccacatgaagtacccagtgtggcctcgctatggctccttcctgcagcccgtgtcggac
aatcgccacctcaccgtggccaccctcgaagagaggccctttgtgattgtggagaacacg
gacccggcctctggtgtctgtgtgcgcaacaccgtcccctgccggaagcaaaccaactac
accgacagtggggatggacctgtggacccctacaccaaactctgctgcaagggcttctgc
atcgacatcctgaagaagctggccaaggcagtgaagttctcctatgatctctacctggta
accaatggaaaacatgggaagatagtgcgtggcatctggaatggcatgattggcgaggtg
tactaccagcgagcagacatggccatagggtccctcaccatcaacgaggagcggtctgag
attgtggacttctctgtgcccttcgtggagacgggcattagtgtcatggtggctagaagc
aacgggacagtctcgccttctgccttcctagagccctacagcccagcggtgtgggtcatg
atgttcgtgatgtgtctcactgtggttgccatcactgtcttcatgtttgaatatttcagt
cccgttggctacaaccagaatctaaccagcggaaaaaagtccggcgggccctccttcacc
attggcaaatctgtctggctgctgtgggccctggtctttaataactcggtgcccattgag
aatccaaaaggcaccacaagtaagatcatggtgctgatctgggccttcttcgcagtgatc
ttcctggccagttacacagctaacctggcagcctttatgatccaggagcaatatatcgac
accgtctctgggctgagtgacaagaagttccagaggccccaggagcagtatcccccgttc
cgcttcggcaccgttcccaatggcagcacggagagaaacattcggagcaactatccagat
atgcacacgcacatgatgaaatacaaccagcgctcggtggaagacgccctgaccagcctc
aaaatggggaagctggacgcctttatctacgatgccgctgtgctgaattacatggctggc
aaggacgagggctgcaagctggtgaccatcggcagtgggaaggtctttgctaccaccggc
tatggcattgctctgcagaaggattccaagtggaagaggccgattgacttggcccttctg
cagttcctgggagacggggaaacccagaaactggagaccgtgtggctgtcggggatctgc
cagaatgagaagaatgaggtgatgagcagcaagctagacattgacaacatggccggggtc
ttctacatgctgttggtggccatggggttgagcctgctggtctttgcctgggagcacctg
gtatattggaaactacgccactctgtccccaagtcgcacaaacttgacttccttctggcc
ataagcaggggcatttatagctgtttcagtggagtccagaatctggagagccctgttcgt
gttcgtactcccgacgtcactgctaactctgcccaagccaatgtgctgaagatgctgcag
gctgccaaggacatggtgtcaacagccagtgttgggagctcccttgagaatgccacacgc
accattgagaactggacaaaccagagtgaaaacctccagaccacgttctcccttagaact
cctcagcttgttgtccagaacaccagtgtgtccaacaggccaccctactcctccaatgtg
gctgcaacagagaagcttgggagggactgtgcccagagggctgttccaccacccatccct
gctccccaacagccctttgtggattccaggctgccagctaatgaaaactggagggcggta
aatgagcaacctccagtacttcaccccctaaagtttagaggaagctattctggggataaa
gttcttccaggttccaccatgggtggctttccgcacctcctggtgaggaccatgcttcca
tcccattttgggagccacatgcccctgggaaaccacctgagcactcccctctcaccactg
aaaactcaaagggagcttcccctcccagacatctacaaagagcacaagcaccctgtgtcc
aggggagagggaaaggagaagcttccaccaaatgtccacctggtatatggggaaggagga
cacagggacccaacccagctggcaaagttgttctccacttccgagaagaaccctttcttg
cctcctgactgcatgaacagctccttctcaaaagccgacaggccttgcagacgcttagct
actgtgttcagggaaccagaaccagtggagctaccttttctgggcaaggagaagctgaac
agaagagccagcctgctgaggtctgcctgggagcagaacgagaagtaccgttccctaggc
atccggagatatgacggcaagtcttccacccgaggggacgtgccagatctcttccccaaa
gctggtgtggcactgaggcagacaccaatgtactatcccacggaagccctcgggtccagt
gctatgtgcaaaagaaaacatgtggaggcaaactcccgactcccttggaaagcccagcgg
ttcctgcaccctcaggcagtgaggctgccctcttacggggaggcgtgcctgcagaacgcc
actggcgtgcaccgggcctcctccaccgtggtgcacaaacagtacgcctacatgaactcc
tatatgaacctgcctatgtacttggggcggctttaccaggggcctcccccgctctgcgaa
tactccaggaccagccagcgctgtgtcactcgggctccctgggcacccaggagcagggac
tacttgatccaggaggacagccggaggaccatgtactttgacagcgtgtacagagactgt
acagagcgaagcagagcagagccgtccttcctccagatggtcaatacggagaggagggac
ctcctggcagcccagagaatgaacagtccttgtgctgcccagtcctggagacgaatctct
agccttgagtccgaggtgtga
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