Caretta caretta (Loggerhead turtle): 125621863
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Entry
125621863 CDS
T09292
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04136
Autophagy - other
ccay04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125621863 (WIPI1)
04136 Autophagy - other
125621863 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125621863 (WIPI1)
03029 Mitochondrial biogenesis [BR:
ccay03029
]
125621863 (WIPI1)
Membrane trafficking [BR:
ccay04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
125621863 (WIPI1)
Mitochondrial biogenesis [BR:
ccay03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125621863 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WDR55
DUF5711
Beta-prop_RSE1_2nd
Beta-prop_Vps41
BCAS3_WD40
EIF3I
Beta-prop_WDR35_TULP_N
RMC1_N
Motif
Other DBs
NCBI-GeneID:
125621863
NCBI-ProteinID:
XP_048675171
LinkDB
All DBs
Position
13:complement(31599258..31631610)
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AA seq
446 aa
AA seq
DB search
MEAAAGGGPAAGPEALSCFSYNQDCTSLAIGTKTGYRLFSLSSVEQLDQVYENNEILDVY
IVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLIVCLEESI
YIHNIKDMKLLKTILDTPPNATGLCALSINHSNSYLAYPGSLTIGEIVLYDGNNLRTVCT
IPAHDGPLAAITFNSTGSKLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVNISSLVFS
MDSQFLCASSNTETVHIFKLEHTTDSRPEEPPTWSGYMGKMFMAATNYLPAQVSDMMNQD
RAFATVRLNFSGQRNICTLSTIQKLPRLLVTTSDGHLYIYNLDPQDGGECVLIKKHSLFG
LGKTDENKENDLRPPLPQSYAATVARQSTMPSSSSMPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGGHPGKVKRS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcggcggggggtggcccggccgcggggcccgaggcgctgagctgcttctcc
tacaaccaggactgcacctccctggcaattggaaccaaaactggatacagacttttctcc
ctaagttctgtggagcagctggaccaagtctatgaaaacaatgaaatcctggatgtttac
atcgtggagcgcctcttctccagcagcctggtggtcgtggtaagtcacaccaagcctcgg
caaatgaacgtctatcacttcaaaaaagggacggagatctgcaactatagctattccagc
aacatcctgtccatccggctgaatcggcagaggctgattgtttgcctggaggagtcaatt
tatattcataacattaaggacatgaagcttttgaagacaatcctggatacccctccaaat
gcaacaggtttatgtgcactttctatcaaccattccaactcctacttggcataccctggc
agcttgactattggggagattgtgctttacgacggaaataatttgagaacagtctgcaca
attcctgcccacgatgggccccttgctgcaataaccttcaactccacaggatcgaagtta
gcaagcgcttcagaaaaaggcactgtcattcgtgtattttctgtacctgatgggcaaaaa
ctctacgaattcagaagaggaatgaagaggtacgtgaacatcagctctctcgtgttcagt
atggactcacagttcctgtgtgcttcaagtaacaccgagaccgtgcacatctttaaattg
gaacataccacagacagccggccagaagagcctcccacctggagtggttacatgggaaag
atgtttatggctgctaccaactacctccctgctcaagtatcagacatgatgaaccaggac
cgagcctttgccaccgtgcgcttgaacttctctggacaaaggaacatctgcacgctctcc
acgattcagaagctaccacgactgttagttacaacatcagacggacacctttacatctac
aacctagaccctcaagatggtggagagtgcgtcttaattaagaaacacagcctgtttggc
ttgggaaagacagacgagaacaaagaaaatgacctccggcctccattacctcagtcttac
gcagcaaccgtagcccgacaaagtacgatgccttcatcttcatccatgccaggttactcg
gaagatgggggcgccctgcgaggagaggttatcccagaacatgaatttgcaactggacca
gtgtgtcttgatgacgagaatgaattccctcctataatcttgtgccgtggaggtcacccg
ggcaaagtgaagaggtcatga
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