Caretta caretta (Loggerhead turtle): 125621864
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Entry
125621864 CDS
T09292
Symbol
BPTF
Name
(RefSeq) nucleosome-remodeling factor subunit BPTF isoform X1
KO
K11728
nucleosome-remodeling factor subunit BPTF
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125621864 (BPTF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125621864 (BPTF)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
125621864 (BPTF)
NuRF complex (fruit fly)
125621864 (BPTF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
PHD
DDT
WSD
PHD_5
WHIM1
Motif
Other DBs
NCBI-GeneID:
125621864
NCBI-ProteinID:
XP_048675174
EnsemblRapid:
ENSCECG00000001096
LinkDB
All DBs
Position
13:complement(29662703..29754365)
Genome browser
AA seq
3251 aa
AA seq
DB search
MRGRRGRPPKQQQPAAATAQASSPAPPAPPGPIGGLRSRQRGSSRGRWAASAQVEAVGPR
PRGVGAVQASSSSTASPRAGSKRKGGSGSSSTPGGGGSSSRGRGRAGAGGAGAGGGGAGG
SCSSQGRAASSRRSISKVVYDDHESEEEEESVVSEEEEEGDPEDNQDSEEQEEEEIMEEE
DDDSDYPEEMEDEDDASYCTESSFRSHSTYSSTPGRRRQRVHRPRSPILEEKDIPLLEFP
KSSEDLMVPNEHIMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQCTLMAEMHIVL
LKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEYHHVLPYQEAE
DYPYGPVESKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKLGDLLCCETCSA
VYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHEPIGYDRNRRKY
WFLNRRLIIEEDSDNEKDKKLWYYSTKVQLAQLIECLDKDYWEADLCKTLEEMCQEIHRH
MDITEDLTNKARGNNKSFLAAANDEILDALRVKKGEIVEDKSQAAEETDKDKNDVENNDQ
TDTEKGKEEPADQLQEKNEETPSEQDSEKGKTEEPTDVGDKSNSGASSTDGSTTNPSAGE
TSSSEGKNAMGCQSETFDSNNVAEKKVASELPQDLSEETGQMTPSISPSAFAAPLQSAEN
SNSSELNSMQNDSIKTSDDAENAEGGSQTSEETGEKSNGERSDSPCTGKGTSGSTRMLTR
LRNPDSKLSQMKSQQVAAAAHEANKLFKEGREVLVVNSQGEISRLNTKKEIVMKGNISNY
FKLGQEGKYRVYHNQYATNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSK
VLTISTLRLTIIQLESNIPASFLHPNWASHRSNWIKAVQMCSKPREFALALAILECAIKP
VVMLPIWRESLGHTRLHRMTAIEREEKEKVKKKERKQEEEETMQQATWVKYTFPIKHQVW
KQKGEEYRVTGYGGWSWISKTHVHRFVPKLPGNTNVNYRKVLPTKNDVTTENQCELDKRK
SPAKVKIETDSSKERIKDSHDPQEKDQTKIEISETLERAQVKEENKMSEEKVEIDMNSEN
LDNAKAEAEREVDCINRAIKEEPMEIDDVKMESPTKNEDIHSKADLINVSEGFHLRTCYK
RKVKTSKLDGLLERRVKQFTLEEKQRLERMKLEASSKPVGSRSVSPQKNIDEPQTTKAKE
GSQIDMSPQDRTHISGKIQTEDSVQDCLPTSSTPCTKTSEPDQPSLPSIDRLSKREGQVL
DDASEIQSSVQNITKEGDSEPVATDNSQGQEVLEKRESENPLMDDLKQTHTEDISKSGTL
KNNEKSSEQKVFNTTVSQSKCENPLQPVVTKSSCETDVQPIAEKATLKEKPEKQVSDPEN
NCTLKSHSEPVSPQENDEGKDIAQKSSDGKTENKILFDQKQSLKTKLTLGKTPESQTPEH
IGGINVSDDLLNSKVTEANGEKQGQEQKMEASTINKCLDQLNLKSITDKKNNKNGEIETK
VEREKSVAFQINGKDSDIKILSNEECLMKDTCDTKAGSDIEPKVNNISKSIPEHEIKPLT
IKECSVKPLMNGDITMEDTDLKNNLDAKSCLQSSAEIGGESGEYPLLPNKMSKCVQNIGE
KQHSLERSNFVDSASTQAQLSCKENVISEAESMETEAVMGKDVAPSPVTSCEESSLSSDF
TDQNGLQMYNKVENINGENKTKNKTVITEVTTTTSTVSTESKTVFKVAELSAFKDDKQTM
VSSTENCAISTVTTTTTVTKLTAPAADSNVDVISVQEHSKTVITTTVTDSLTIPGGTLVT
SMTVSKEYSTRDKVKLMKFSRPKKTRSGTALPSYRKFVTKSSKKSIFVLPNDDLKKLARR
GGIREVPYFNYNAKPAMDIWPYPSPRPTFGITWRYRLQTVKSLAGVSLMLRLLWACLRWD
DMAAKPPPGGGTTRTETSETEITTTEIIKRRDVGPYGIRSEYCIRKIICPIGVPEAPKET
PTPQRKGLRSSALRPKRPETPKQTGPVIIESWVAEEELELWEIRAFAERVEKEKAQAVEQ
QAKVSEQKKAEEFKAQMEVQLKQQRLAAQQKRLEQQKQLPTTATTVTTASSTATTASTPQ
KVVVGPLTGPVPTGTKVVLTTKVGSPATVTFQQNKNFHQTFATWVKQGQSSAATSTAATS
ATTIASTGQTFQIAGTPVTMAGKVITKLPLPANSKIVAVNVPSTQGGVVQVQQKVLGIIP
STTGANQQTFTSFQPRTATVTIRPNTTGTLGTTCTSQIMPGTPLRPGMTVIRTPLQPSTL
GKAIIRTPVVVQQGILPSSQTQQVVTQIIRGQPVSTAVSSTSTTSSSPGQKVATAPGTPP
QNIQPQTTTPQPTRPQQGQVKLTMAQLTQLTQGQGGSQGLTVVIQGQGQTTGQLQLIPQG
VTVIPGPGQQLMQAAMPNGTIQRFLFTPLSSSASTASATTTTVSTSTSATGEQKQASQTQ
TQPVLPPVQPHPHSQLQAQPQVQTQSLQPQPPAQPQTTQPSLQPEDQTQPESQSPTSAQS
PVVSEAQTVVAQATKTPVTVQSPPQTQVQGLSQIQIQNQPQTVIHPQAQSQVQALQQAQV
QTTTQQQIQVQPQASLQIQAQLQQQSQPQIQTSLQTLPTAQNLNQVTVQSPSRPQLQIQQ
PTTKVITVPQLQQQVQVLSQLQSHVVAQIQAQQGGVPQQIKLQLPIQIQQASPVQAHQIQ
NVVTVQAASVQEQLQRVQQLREQQQKKKQQQIEIKREHTLQASNQSDIIQKQVVMKHNAV
IEHLKQKKTLTPAEREENQRMIVCNQVMKYILDKIDKEEKQAAKKRKREESVEQKRSKQN
ATKLSALLFKHKEQLKAEILKKRALLDKDLQIEVQEELKKDLTKIKREKEKAQAAAAAAA
AAAAAAAAATPPPPPPPPPPPPQHATSIAAATTVPAPASSQKRKREEEKDSSASKSKKKK
MISTTSKETKKDTKLYCICKTPYDESKFYIGCDLCTNWYHGECVGITEKEAKKMDVYICN
DCKRAQEGSSEELYCICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEADLIDEYVCPQC
QSTEDAMTVLSPLTDKDYEGLRRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLA
TMEERILKRYYKKVTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGFKASR
SHNNKLQSTAS
NT seq
9756 nt
NT seq
+upstream
nt +downstream
nt
atgcggggccggcgaggcaggccgcccaagcagcagcagcctgcggcggccaccgctcag
gcgagctccccggctccgcccgccccaccgggccccattggggggctgaggtcccggcag
cggggcagcagtcggggcaggtgggcggcctcggcccaggtggaggcggtggggcccagg
ccgaggggggtcggggctgtccaggcctcttcctcctccaccgcctcccccagagcgggc
agcaagaggaagggcggcagcggcagcagcagcacccctggtgggggaggcagcagcagt
aggggcaggggcagggctggggctggaggagcaggagcagggggaggaggcgcaggaggc
agctgcagcagccaaggcagggctgcctcgtccaggaggagcatcagcaaagtggtgtac
gatgatcatgagagtgaagaggaggaggagagcgtggtgtccgaagaggaagaggagggg
gaccccgaggataaccaggactccgaggagcaggaggaagaggagatcatggaggaggag
gacgacgactccgattaccccgaggagatggaggatgaagatgatgccagctattgcact
gagagcagcttcaggagccacagcacctacagcagcaccccaggtagaagaagacaaaga
gtgcatcgtccacgttctccaatattggaagaaaaagacataccactccttgagtttcct
aaatcctctgaggacttaatggtgcctaatgagcatataatgaatgttattgccatctat
gaggtactacggaactttggcactgttttacgcctgtctccttttcgttttgaggacttc
tgtgctgctctggtaagtcaagagcaatgcacacttatggcagagatgcatatagtgctt
ttaaaagcagttttacgagaagaagacacttcaaatactacctttggacctgctgacctc
aaagatagcgttaattccactttgtatttcatagatggaatgacgtggccagaggttctg
cgggtatattgtgagagtgacaaggaataccatcatgttcttccttatcaagaggcagag
gactatccttatggaccagtagagagtaaaatcaaagttctacagttcttagtagatcag
tttcttacaacaaacattgcacgtgaggagctaatgtccgaaggtgttatccagtatgat
gatcactgtagggtttgtcacaaactgggggatttgctttgctgtgaaacttgctcagct
gtgtaccatttagagtgtgtgaaaccacctcttgaagaggtaccagaggacgaatggcag
tgtgaggtctgtgtagcacataaggtgcctggtgtaactgactgtgttgctgaaatccaa
aaaaataaaccatatattcgacatgaacccattggatacgacagaaacagacggaaatat
tggttcctgaacagaagacttattatagaggaagattcagacaatgagaaggataagaaa
ctctggtactatagcacaaaggtccagctggcacagttaattgaatgcctagacaaagat
tactgggaagctgatctttgcaaaactcttgaagaaatgtgccaagaaattcatcggcat
atggatatcacggaagaccttactaacaaagcacggggcaacaacaaatctttccttgct
gcagcaaatgatgaaatattggatgctcttagagtcaaaaaaggagaaatagtggaggat
aaaagtcaagcagctgaggaaacagataaggacaaaaatgatgttgaaaataatgaccaa
acagatactgaaaaaggcaaggaggaacctgcagaccaactacaggaaaaaaatgaagaa
acaccatctgaacaagattcagaaaaaggaaaaacggaagagccaacagacgttggggat
aaaagtaactctggggcatcaagcacagacggcagcaccacaaatccttctgcaggagaa
actagttcctctgaagggaagaacgcaatggggtgtcagtcagaaacctttgatagcaac
aatgtggcagagaagaaagtggcatcagagctccctcaggatctctcagaagaaactggt
cagatgacccccagcatcagtcctagtgcattcgctgcacccctccagtctgccgaaaac
agcaacagcagcgagctaaattctatgcagaatgactccattaagacatctgatgatgct
gaaaatgcagaaggaggatcccagacctcagaggaaacaggggagaaatccaatggtgaa
agaagtgattctccatgcacagggaaaggcacatcaggctcgacacgaatgcttacccga
ttacgaaatccagatagcaagctgagccagatgaaaagccagcaggttgctgctgcagca
cacgaagcaaataaattatttaaagaaggcagagaggttctggtggttaactcccaaggg
gaaatttcccggttgaataccaagaaagaaatcgtgatgaaaggaaacatcagtaattat
ttcaagttaggtcaagaggggaagtatcgtgtctatcacaaccagtatgccaccaactca
tttgcattgaacaaacaccagcacagagaagaccatgacaagagacggcaccttgcgcat
aaattctgcctgactcctgctggagagttcaaatggaatgggtctgtacatgggtccaag
gttcttaccatatctactctgaggctaactatcattcagctagagagcaacatccctgca
tcattccttcaccccaattgggcctcccacaggtctaactggattaaggctgttcaaatg
tgtagcaaacctagagaatttgcactagctttggctatattggagtgtgcaattaaaccc
gttgtcatgctgccaatttggcgggagtccttggggcacactagattacacagaatgaca
gctattgaaagagaagaaaaggaaaaggtgaaaaaaaaagagaggaaacaagaggaggaa
gaaacaatgcaacaggctacgtgggtgaaatatacctttcctatcaaacatcaggtttgg
aaacaaaaaggagaggaatatagagtaacaggatatggtggttggagctggattagtaaa
acacatgttcataggtttgtgcctaaattacctggaaatactaatgtcaattacagaaaa
gtgctaccaacaaagaatgatgttaccactgaaaaccagtgcgaactggataaaagaaaa
agtccagcaaaagtaaaaatagagactgattcttctaaagaaagaataaaagattctcat
gatccacaagagaaggaccaaacgaaaatagaaatttctgaaaccttggagagagcccaa
gtaaaggaagaaaacaaaatgagtgaagaaaaggtggaaattgatatgaattctgaaaac
ttagataatgcaaaagctgaagcggaaagagaagttgattgtataaatagagccatcaaa
gaagaacccatggagatagatgatgtaaaaatggaatcccccacaaaaaatgaggatatt
cactctaaagcagatttaatcaatgtcagcgaggggtttcacttaaggacttgctacaaa
agaaaagtaaaaacatcaaaattagatggactacttgaaagaagagtaaaacagtttacg
ctggaagaaaaacagcgcctagaaaggatgaagctggaggctagttctaaacctgtaggc
agtagatctgtgagtccacagaaaaacatagatgagccacaaacaactaaagcaaaagaa
ggaagccagattgacatgtctccccaagacagaacccatatttcaggtaagatccaaact
gaagattcagttcaggactgcttgccaaccagcagtacaccttgtacaaaaaccagtgaa
ccagaccagccttctttgccttccatagacagactgtcaaaaagagaaggccaagtactg
gatgatgcctctgaaattcaaagctcagttcagaacatcactaaagaaggtgattctgaa
ccagtcgctactgataatagtcaaggacaagaagttcttgaaaagagagagagtgagaat
cccctcatggatgacttaaaacaaacacacacagaagatataagcaagagtggcacctta
aaaaacaatgaaaaatcttcagaacaaaaagtatttaataccacagtgtctcagagtaaa
tgtgaaaaccccttacagccagtggtaactaaaagcagctgtgaaacagatgttcagccc
attgctgaaaaagcaaccttgaaagaaaaacctgaaaaacaggtcagtgacccagaaaat
aattgcacgctgaaaagccattctgaaccagtgtccccacaagaaaatgatgagggaaaa
gatattgctcagaaaagcagtgatggtaaaactgaaaacaagattttatttgatcagaaa
caatcattaaaaaccaagctaactttaggaaaaacacctgaaagccaaactcctgaacac
attggtggaataaatgttagtgatgatttactgaattctaaagtcactgaagctaatggt
gaaaagcagggtcaggaacagaaaatggaagcaagtaccataaacaaatgtctcgatcag
ctgaatctaaaaagtatcactgacaaaaagaacaataagaatggagaaatagagactaaa
gttgagagagagaaatcggtggcatttcaaattaatggaaaagacagtgacattaagata
ttgtcaaatgaagaatgcttaatgaaagatacctgtgatactaaggcagggagtgatatt
gaacctaaagtcaataatattagtaaatccattcctgaacatgaaataaaaccattgact
attaaagaatgctctgtaaagccattaatgaatggtgatatcactatggaggatacagat
ttaaaaaataacttggatgctaaatcatgtttacagagttctgcggagattggtggtgaa
tctggagagtatcctctgcttccaaataaaatgtccaaatgtgtgcaaaatattggagaa
aagcagcattctcttgaaagatccaactttgttgatagtgcttctacacaagcacagctt
tcctgtaaggaaaatgtgattagtgaagcagaatccatggaaactgaagctgttatgggt
aaggacgttgcaccctcaccagtaacttcttgtgaggaatctagcttgagtagtgacttt
actgatcagaatggcctgcagatgtacaataaagttgaaaatatcaatggagaaaataaa
acaaaaaataaaactgttattacagaagtgaccaccacaacatcaactgtttccacagaa
tccaaaacggtgtttaaagtagcagagttgtcagccttcaaggatgataaacaaactatg
gtgtcatctacagaaaattgtgccatttccactgtaactaccaccaccactgtaactaag
cttactgcacctgctgcagacagcaatgttgatgtcatctctgtacaggagcacagtaaa
actgtgattacaacaacagtaactgattcattaactattccaggaggcacgttagtgact
tccatgactgtgagcaaagaatattccacaagggataaagtgaagttaatgaaattttcg
agacccaaaaagactcgttctggaacagccttgccatcttacagaaaatttgttaccaaa
agcagtaaaaagagtatatttgttttacccaatgatgatttaaaaaagttggccagaaga
ggaggtatcagagaggttccctatttcaactacaatgcaaaacctgccatggatatttgg
ccgtatccatccccaagaccaacttttggtatcacttggagatatcgacttcaaacggtg
aagtcattggctggggtgagccttatgttgcggttactctgggcatgtttacgttgggat
gatatggctgcaaaacccccacctgggggaggaactacgcgcacagaaacatctgaaact
gaaattacaacaactgaaataatcaaacggagagacgttggtccttatggaattcgttca
gagtactgtataagaaaaatcatttgccctattggtgtacctgaggctccaaaagaaact
cctacacctcagaggaaaggccttcgatcaagtgcattgaggccaaagaggccagaaacg
cccaagcagacaggacctgttatcattgaaagttgggtagcagaggaggaactggaatta
tgggagatcagggcatttgctgaaagggtggagaaagaaaaggcacaggcagttgagcag
caggctaaggttagtgaacagaagaaggctgaggaattcaaggcccaaatggaggttcaa
ctaaaacagcaacgattggctgcccagcagaagcgactggaacaacagaagcagttacct
acaacagccactacggtcactacagcaagcagtactgcaaccactgcctccactccacag
aaggttgtggtaggcccattaacaggcccagttcctactggaaccaaagtagtgcttact
actaaagtgggctctccagctacggtaacattccaacagaacaagaacttccatcagact
ttcgctacctgggttaaacaaggccagtcctcagcagctaccagcacagctgctacatca
gctacaaccattgccagcacaggtcagacgttccagattgcaggcactccagtaactatg
gcaggcaaagtgataacaaagttgccacttccagcaaacagcaagattgttgccgttaat
gtgccatcaacccaaggaggtgttgttcaagttcagcaaaaagtgttgggtatcattcca
tcaactacaggtgcaaatcaacaaacatttacttcattccagccaaggacagcgactgta
actattaggccaaataccacagggactctaggtacaacatgtacttcacaaataatgcca
gggacaccactccgcccaggtatgacagtaataaggacaccacttcagccatcaacatta
ggaaaggccatcattcgaacacctgtagtggtgcagcaaggtattcttccatccagtcag
actcaacaggtggtgactcagataattagaggtcagcctgtctcaactgcagtttctagt
actagcacaacttcttcaagtcctggacaaaaggtagcaacagctcctggaacacctcca
cagaatatacaaccacaaaccacaacgccgcagcccactcgtccccagcaaggacaagtg
aaacttactatggcccaactcacgcagttaactcaaggacagggtggcagtcaggggttg
actgtggtaattcagggacagggtcaaactactggccagttacagttgatacctcagggt
gtgactgtcataccaggtccaggacaacagctaatgcaagcggctatgccgaatggtaca
attcagagattccttttcactccgttatcatcatccgcttctacagctagcgcaactact
acgacggtttccacttcgacatcagctactggagagcagaaacaagcctcacaaacacag
acacaaccagtgctgccaccagttcagccccaccctcacagtcagttgcaagctcagcca
caggtgcaaacccagagtcttcagcctcagcccccagcccaaccacagactactcagccc
tcacttcagcctgaagatcagacacagcctgagtctcagtctccaacatcagctcagtct
ccagtcgtatctgaagcacaaactgtcgtggcacaagcaactaaaactccagtcacagtt
cagtctccaccacagacccaggttcaagggctgtctcaaattcaaatccaaaatcaacca
cagactgtcatccatccacaagctcagtcccaagtccaagctctgcagcaagctcaggtg
cagactacaactcagcaacagatacaagtgcaaccccaagcttctttacaaatacaagct
caactgcagcagcagtcacagccccagattcagacttcccttcagactcttccaactgca
caaaatttaaatcaagttactgtacaatctccatctcgccctcaactgcagatccagcag
cctacaacaaaagttattactgtacctcagctacagcagcaagtccaagttctctcccaa
cttcagtctcatgttgtagctcagatacaggcccagcaaggcggagtcccccagcagatt
aagcttcagttgcctattcagattcaacaagccagcccagtgcaggctcaccagattcag
aatgtggtaacagttcaagcagctagtgttcaagagcagctgcagagggttcagcagctc
agggagcaacagcaaaagaaaaagcagcaacagatagaaattaaacgtgaacacactctt
caggcttctaatcaaagtgacattatccaaaaacaggtggtgatgaaacacaatgctgtc
atagaacacttgaaacagaaaaagacactgaccccagctgaacgagaagaaaatcagaga
atgatagtgtgtaatcaggtgatgaagtatattttggataagatagataaagaagaaaaa
caggcagctaagaaacggaagcgagaagagagtgttgaacagaagcgtagtaaacagaat
gctaccaagctctcagctctgcttttcaaacataaagaacagcttaaagctgaaatactg
aaaaaaagagcacttctggacaaagatctacaaattgaagtgcaggaagagctaaagaaa
gacttgactaaaattaagagagaaaaagaaaaagctcaggcagctgccgctgcagccgct
gctgctgcagccgctgccgctgcggcaacaccacctccgccaccgcctccccctccgcca
ccgccgcagcatgccaccagcatcgcagctgccaccacagtcccagcgccagcgtcttcc
cagaagagaaaacgagaggaggagaaagattcttcagcttccaagtccaagaaaaagaaa
atgatttctactacctcaaaggaaaccaagaaggacacaaagctttattgcatctgtaaa
acaccttatgatgaatccaagttctatattggctgtgatctttgtactaactggtatcat
ggagaatgtgttggcatcacagaaaaggaggctaagaaaatggatgtgtacatctgtaat
gattgtaaacgggcacaagagggcagcagtgaggaattgtactgtatctgcagaacacct
tatgatgagtcacaattttacattggctgtgaccgatgtcagaactggtatcacgggcgc
tgtgttggtattttgcaaagtgaggcagatctcattgatgagtatgtctgtccacagtgt
cagtctacagaagatgccatgacagtactcagtccactgactgataaagattacgaggga
ttacgacgagtactacgttccttacaggctcacaagatggcatggccattcctagaacca
gttgatcccaatgatgcaccagattattatggtgttatcaaagagcctatggaccttgct
accatggaagaaagaatcctgaaacgttactacaaaaaggtgacagagtttgtggcagat
atgaccaaaatttttgataactgtcgttactacaatccaagtgactcccctttttaccaa
tgtgcagaggttcttgaatcattctttgtacagaagctaaaaggattcaaggcaagcagg
tctcataacaacaaactgcagtctacagcttcttag
DBGET
integrated database retrieval system
