Caretta caretta (Loggerhead turtle): 125621963
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Entry
125621963 CDS
T09292
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125621963 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125621963 (APEX1)
Enzymes [BR:
ccay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
125621963 (APEX1)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
125621963 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
125621963
NCBI-ProteinID:
XP_048675378
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All DBs
Position
14:complement(33203504..33208846)
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AA seq
318 aa
AA seq
DB search
MPKRGKKAEDVDSTDEFEATEPGAKKSKKGAAKGPKEKVAEGPILYQDPPDKLTSPGGQK
YTLKVTSWNVDGLRAWVKKKGLEWVHEEDPDVLCLQETKCAEKLLPPEMREMPEYPHKYW
ACAGTKEGYSGVALLCKIEPLSITYGIGEEEHDQEGRVITAEFPSHFLVTAYVPNAGRGL
VRLEYRQRWDAAFRAYLQGLDARKPLVLCGDLNVAHAEIDLKNPKGNKKSAGFTPEERQG
FGELLAAGFTDTFRHLYPDTPHAYTFWTYMMNARAKNVGWRLDYFLVSMRLLGALCDSKI
RSQAMGSDHCPVTLYMAL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgggggaagaaggcagaggatgtggacagcacggacgagttcgaggccaca
gagcccggggcaaagaagagcaagaagggggcagcgaagggccccaaggagaaggtggca
gagggccccatcctgtaccaggatccgcccgacaagctcacctcccccggtgggcagaag
tacaccctgaaggtcacatcgtggaacgtggatgggctccgggcctgggtcaagaagaag
ggcctggagtgggtgcatgaggaggaccccgatgtactgtgcctgcaggagaccaagtgt
gcagagaagctgctgccccccgagatgcgggagatgcccgagtatccccacaagtactgg
gcctgcgccggcaccaaggagggctacagcggggtggctctgctctgcaagatagaaccg
ctcagcatcacctacggcattggcgaggaggagcacgaccaggagggccgtgtgatcacg
gccgagttcccctcgcacttcctggtgacggcctacgtgcccaacgcgggccgggggctg
gtgaggctggagtaccgccagcgctgggatgccgccttccgggcttatctgcaggggctg
gatgctcgcaagcccctggtgctctgcggggatctcaacgtggcccacgccgagatcgac
ctgaagaaccccaagggcaacaagaagtcggcaggcttcacgcccgaggagcgccagggc
tttggggagctgctggcagccggcttcactgacaccttccgccacctctatcctgacacg
ccccacgcctacaccttctggacctacatgatgaatgcccgcgccaagaatgtgggctgg
cgccttgactacttcctggtctcaatgcgcctgctgggggcgctgtgcgacagcaagatc
cgctcccaggccatgggcagtgaccactgccccgtcaccctctacatggccctgtga
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