Caretta caretta (Loggerhead turtle): 125622133
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Entry
125622133 CDS
T09292
Name
(RefSeq) LOW QUALITY PROTEIN: tyrosine-protein phosphatase non-receptor type substrate 1-like
KO
K06551
signal-regulatory protein alpha/beta1/gamma
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125622133
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccay04515
]
125622133
04090 CD molecules [BR:
ccay04090
]
125622133
Cell adhesion molecules [BR:
ccay04515
]
Immunoglobulin superfamily
SIRP family
125622133
CD molecules [BR:
ccay04090
]
Proteins
125622133
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
Ig_3
ig
C2-set_2
Ig_2
I-set
V-set
C2-set_3
C1orf162
SIT
Psg1
CrgA
CcmD_alt
RIFIN
OAD_gamma
Insulin_TMD
GST_C_3
Motif
Other DBs
NCBI-GeneID:
125622133
NCBI-ProteinID:
XP_048675722
LinkDB
All DBs
Position
14
Genome browser
AA seq
508 aa
AA seq
DB search
MEPVASRSCCPACWLPCLLLLALLGRPGAGGAEEFRLLQPQDAVRVSAGETLTLTCSVTG
LAPVGPVKWFKDSGGGRQLVYAQXQGSFPRVTRAASGSDTDFTIRISDTRPADAGTYRCV
KFKKGSGADEEIRSGAGTAVTVSASPSAPSVSGPSSRVEPGPSVTFTCTSGGFSPRDITV
TWLKNGTKLPAPQPQVLPEHKSVSYNMSSTVGLSLTRGDVRSQLTCQIEHSTLPAPLRGS
YNLRDALRVPPRLRVGDPAAPVTLNESVPFTCHAEGFYPKDASLTWLENGNETNLGKSSP
LAENPDGTYTLQSSLEVKATEPRNRSMFTCRVVHDSQPPVSASQMLRISQPPPTPSKDGT
SHDAENNLSNLKIYIAVAVVCAVLGVLVIAVIYLIRVQQRKGKSSPSVRLHEPKKSPSTA
LQDSDPNTLSYADLNFDKQQKKRSTRRFMEMSPQLEYACIQTGQPAVAEDNLTYADLDMV
HLSKAPKRPAPRPEEAISEYASVQIQKK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgtcgccagccgttcctgctgccctgcctgctggctgccctgcctgctgctc
ctcgccctgctgggccggccgggggccgggggggccgaggagttccggctgctgcagccc
caggacgccgtgcgggtgtccgcgggagagactctcactctgacctgctctgtgaccggc
ctcgctccagtaggacccgtgaagtggttcaaagactcgggcgggggccggcagctcgtt
tatgcacagnngcagggatcattcccccgggtgacgcgggctgcgagtggctctgacaca
gacttcaccatccgcatcagtgacacccgccccgcggacgccgggacctatcgctgtgtg
aagtttaagaaggggtcgggagccgatgaggagatcagatccggcgcgggcacggccgtg
actgtgagcgccagcccctcggccccgtccgtgtccggcccctccagcagggtggagccg
ggtccctcagtgactttcacctgcacgtcaggaggattctcccccagagatatcactgtg
acctggctcaaaaatgggaccaaactcccagccccccagccccaggttctccccgaacac
aaaagcgtctcctacaacatgtccagcaccgtgggactgagcctgacccgaggagacgtc
cgctcccagctcacctgtcagatagagcacagcaccttaccggctcccctgcgtgggtcc
tacaacctcagagatgccctgcgagttccacccaggctgcgagtgggtgacccagcagcg
cccgtcacactgaacgagtctgtgccgttcacctgccacgcggaggggttttacccgaag
gacgcgagtctcacctggctggagaatggaaatgagacgaaccttggaaaatcctccccc
ctggccgagaatccagatgggacgtacacgctgcagagctccctggaggtcaaagcaact
gaaccgaggaatcggtccatgttcacctgtcgggttgtgcacgattcccagccccccgtc
agtgccagccagatgctgagaatctcccagccacctcctacgccaagcaaagatggtact
tcacatgatgcagagaataacttatctaacctaaagatctacatagccgtagcagtggtt
tgtgcagtgctgggtgtattggtaattgctgtcatctatctcatcagagtacaacagcgc
aaaggaaaaagctccccttctgtaaggctacatgagcccaagaagagccccagcacagct
ctccaggattctgatcccaacaccctgtcctatgcagacctgaactttgacaagcagcag
aagaagaggagcacgcgccggttcatggagatgagcccgcagttggagtacgcctgcatc
cagaccggccagccggcagtcgctgaagacaatctcacctacgctgacctggacatggtc
cacctcagcaaggcacccaagagacctgccccccggcccgaggaagccatctcggagtac
gccagcgtccaaatccaaaagaaatga
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