Caretta caretta (Loggerhead turtle): 125622144
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Entry
125622144 CDS
T09292
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03250
Viral life cycle - HIV-1
ccay04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125622144 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
125622144 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125622144 (SAMHD1)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125622144 (SAMHD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
SAM_Ste50p
HD_assoc_2
PDEase_I
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
125622144
NCBI-ProteinID:
XP_048675751
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Position
14:complement(28692262..28757867)
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AA seq
628 aa
AA seq
DB search
MSRSGAAVAGGVAKRGRPASPPDGFCTPEKRVSAWGAMAPEGPHPRHWGTEQVCDFLCRN
GFSEPGLLRRFRENQITGAVLPYLTKSELKDLGVGPLDLRVKLLVCLQKLEKNHGDIMKV
FNDPIHGHIEIHPLLVRIIDTPQFQRLRYIKQLGGTYYVFPGASHNRFEHSLGVGYLAGC
LVQALHERQPELEINQRDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPGLKWKHETAS
VQMFEHLITSNGLEKVMEDYGFVLKEDTDFIKEQIGGPLDTTPCRGLWPYRGRPEEKSFL
YEIVANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFLKFARVCEVKNKKHICTRDKEVG
NLYDMFHTRNCLHRRAYQHKVGNIIETMITDAFLKADPYIKIEGTGGKHYKISTAMEDME
AYTKLTDNIFLEILYSSNKELTEAREILRKIELRDLYKYLGETRTEPGKEITEEQYDRLP
ADIVASRPKNAPQDIELNAEDFIVDVINMDYGMKEQNPIDKVRFYCKSDPSQAVKISKEQ
VSRLLPETFAEQLIRVYCKKKDEKSLDAATKCFIQWCMNMDFTKPQDGDVVAPELTPMKP
SWNDPDEDELQSANDCREASKSRTRLFQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagccggagcggggctgcagtggccggaggcgtggccaagcgtggccggcccgccagc
cctcccgatgggttctgcacccccgagaagcgggtctccgcctggggggctatggccccg
gaggggccccacccgcggcactggggcaccgagcaggtctgcgacttcctctgccgcaac
ggctttagcgagcccggcctgctgcgccgcttccgagaaaatcaaatcaccggggcagtg
ctgccttacctcactaaatctgaacttaaagacctaggagttgggcccttggacttgaga
gtgaaattgcttgtttgcctgcaaaaattagaaaaaaatcatggtgatataatgaaggtt
tttaatgatcctattcatggccatattgaaatacatcctctcctcgttcgaatcattgac
acacctcagtttcaacgcctgcgatatataaaacagctgggaggcacttactatgttttc
ccaggagcatcgcacaaccgctttgaacattccttgggggtaggctatctggcaggatgt
ctggtccaggcattacacgaaagacagccagagttggaaataaaccagcgagatattctc
tgtgttcagattgctggactttgtcacgatttgggtcatggaccattttcacacatgttt
gatggaagatttattccacttgctcgcccagggctgaaatggaagcatgaaactgcttct
gttcagatgtttgaacacctgattacttccaatgggctagaaaaagtcatggaagattat
ggttttgtcctgaaagaagatacggacttcatcaaggaacaaataggaggaccactagat
acaaccccatgtcgaggtttgtggccataccgtggtcgaccagaagagaaaagcttcctt
tatgagatagtggctaacaaaagaaatggcatcgatgttgacaaatgggattactttgcc
agggattgccatcacttaggaatccagaataattttgattataagcgcttccttaaattc
gctcgggtctgtgaagtgaaaaacaagaagcatatctgtacccgtgacaaggaggttgga
aatctgtatgacatgttccatacacggaattgtttgcaccgcagagcttaccagcacaag
gttggcaacatcattgaaacaatgattacagatgccttcctaaaagcagatccctatatt
aaaatagagggcactggtggaaaacactacaagatttctacagcaatggaggatatggaa
gcttacactaagctgacagataacatctttctggagattctgtactctagtaataaagag
ctgacagaggcacgagaaattttgcgtaaaatagagcttcgcgatctatacaagtattta
ggagagactcggactgaaccaggaaaagaaattacagaggagcagtatgataggctgcca
gctgacattgttgcttccagaccaaagaatgcacctcaggatattgaattgaatgctgaa
gactttatagttgatgttatcaatatggactatggaatgaaagaacagaaccctattgat
aaagttcgcttctattgcaagtctgatccgagccaggcagtcaagatttcgaaagaacag
gtttcaaggcttctgccagagacatttgcagagcagctgatccgggtttattgcaagaaa
aaggatgagaagagtttagatgctgcaacaaagtgttttattcagtggtgtatgaacatg
gattttactaaaccacaggatggtgatgtggtcgcccctgaactaactccaatgaaacca
agctggaatgaccctgacgaggatgaattgcaaagtgcaaatgactgcagggaagcttca
aaatccagaaccagactctttcaataa
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