Caretta caretta (Loggerhead turtle): 125622233
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Entry
125622233 CDS
T09292
Symbol
NELFCD
Name
(RefSeq) negative elongation factor C/D isoform X1
KO
K15181
negative elongation factor C/D
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125622233 (NELFCD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125622233 (NELFCD)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
125622233 (NELFCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
125622233
NCBI-ProteinID:
XP_048676039
EnsemblRapid:
ENSCECG00000009334
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All DBs
Position
14:complement(9569956..9584461)
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AA seq
583 aa
AA seq
DB search
MEDTDYFSGSAAEWGDDADGGAQDDEYGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLK
RYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHF
DPRKADSIFTEEGETPAWLEQMIAHPTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGE
ITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFAQSMMSI
LAQEEQGGSAVHRIAQEVQRFAHEKGHDASQITLALGTAASYPRACQALGAMLSKGALNP
ADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHILAYAASVV
ETWKKNKRVSINKDELKSTSKAVETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGV
LKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVM
EQLELKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTS
DFVQLFLPILENESIAGTIKTEGEHDPVTEFIAHCKSNFIMVN
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaggacactgactacttcagcggcagcgcggcggagtggggggacgatgcggatgga
ggggcgcaggatgatgagtatggagaaggagaagatgatgctgaagtccagcaagaatgt
ttgcataaattttccactcgagattatataatggaaccctctatatttaacacactgaaa
aggtatttccaggcaggtggctctccagagaatgttatccaactgctgtcagagaattat
actgcagtagcacaaactgtaaatctactggcagagtggctcattcaaacaggtgttgag
ccggtgcaggttcaggaaactgtagaaaatcacttgaaaagtttactcatcaaacacttt
gaccctcggaaagcagattccatctttacagaggaaggcgagactccagcctggcttgag
caaatgatagcacatcctacatggagagatcttttttacaaacttgcggaagcccatcca
gactgcctgatgcttaattttactgttaagcttatatctgatgctggttatcaaggggaa
ataaccagtgtatcaacagcatgtcagcaattagaagtcttttctcgagtgctacgaact
tctctggctacaattttagatggaggggaagaaaaccttgagaagaacctcccagagttt
gcaaaaatggtttgccatggagaacacacatatctctttgctcaatccatgatgtccata
ttagcccaagaagagcaaggtgggtctgctgtgcacaggattgctcaggaggttcagcga
tttgctcatgagaaaggccacgatgctagtcagatcactctagccctgggtactgcagcc
tcctaccctcgagcatgtcaagcacttggtgccatgttatccaaaggagcactgaatcca
gcggacatcacagtcctgttcaaaatgtttacaagcatggacccacctccagtagaactg
attcgagtacccgcctttctggaccttttcatgcagtcactatttaagccaggtgctaag
atcaatcaggaccataaacacaagtatatccacatattggcatatgcagccagtgtagtg
gagacatggaaaaagaacaagagagtgagcataaacaaagacgagctgaaatcaacttca
aaagctgttgaaactgttcacaatctgtgctgcaatgagaacaaaggagcttcagagctg
gttgcagagctgagcaccctctatcagtgcatcaggtttcctgtggtggcaatgggtgta
ttaaagtgggtggactggacagtgtcagaaccacgatattttcagcttcagactgatcac
actccagtgcatctggcattactagatgagatcagcacgtgccatcagctgcttcacccc
caagttctgcaacttcttgtcaagctctttgaaacggaacactcccagcttgatgtcatg
gaacagctggaattgaagaaaacccttctggacagaatggttcacttactcagtcgggga
tatgtcctacctgtcgttggttatatccgcaagtgtctggagaaactagacacagacatc
tcactcattagatactttgttactgaggtactggatgtgattgctcctccatatacttca
gactttgtgcagcttttccttccaatcttagagaatgaaagcattgcaggcactattaaa
acagaaggtgaacatgaccctgtcacagaattcatagctcattgcaaatctaacttcatt
atggtgaactga
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