Caretta caretta (Loggerhead turtle): 125622328
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Entry
125622328 CDS
T09292
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04217
Necroptosis
ccay04622
RIG-I-like receptor signaling pathway
ccay04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
125622328
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125622328
04625 C-type lectin receptor signaling pathway
125622328
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccay01002
]
125622328
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125622328
Enzymes [BR:
ccay01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125622328
Peptidases and inhibitors [BR:
ccay01002
]
Cysteine peptidases
Family C67
125622328
Ubiquitin system [BR:
ccay04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125622328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
125622328
NCBI-ProteinID:
XP_048676258
LinkDB
All DBs
Position
14:complement(34536351..34546439)
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AA seq
855 aa
AA seq
DB search
MTGDRSHPPITMRPRRFFILVQDFSGEGGGQVPRGSLLSQAGEPPALDCPFWAKLLDTEA
MVQLPARAARELSKEQAGMLQAVTNGDERLGLFRQEGLLRRRGALRPGDRVRVQITSASG
EKVRGVLRYRGPMGDSKEQAGVIFGVELVGSAAGKGFTDGSFRGQKFFSCRENCGVFVPV
SRIEPDEGAECSPLIAPRGSRRACTRLQLATGDPLKSSPPLELGDRVFFKMGDSAPGGTV
FFCDYLPKKEMAGVFVGICLDQPVGSWDGKFSGQSLCHFPSPEHGILLPITKVHKEKADE
GPKALSDDPSLRLLDDPPSPSSIRYPPRPEWGSPHGSPSSLLMGGTEEQGEGEKEEGEEE
ELAFPLLEINSMVEVHDPPIYGVIRWIGAPPDVGETIAGLELEEPLPSGCTDGIYRGMRY
FQCPPGKALFVKLRHCRPDARFGAPQPPENPVLRCNSLAFRVYASERVPEDTPPGLGEEG
GQRLMGWKKGIQGHCNSCYLDATLFCMFAFSSVLDSLLLRPADKNDGASYEETRDLLRTE
IVNPLRKHGYVCATKVMSLRRVLEAAGHSPGFTSEEKDPEEFLTLLFRVLKMEPLFKIRS
ADKDPQGCIFYQIFMEGGAGGAGRGVPTVQQLLEGSLVAGDLKFTEAPSCLILQMPRNGK
DYKAFATILPSLELDLTDLLEDTPRECCICQDLARSECPECYGDPSIGAGSTRQYCTVCW
QQVHRHRARRSHHPRALRLPPELEHLPPPPGPLPRQTMQLYAALCIQTSHYVAFARHGPH
RGQWLFFDSMADRQGGQNGFNIPRVTPCPEVADYLEMSPEELQVLDPKSLPPCARRLLCD
AYMCLYHSPTLGLYK
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcgacaggtctcacccccccatcaccatgcggccacgccggttcttcatcttg
gtgcaggatttctctggggaaggtggggggcaggtgccccggggcagcctcctgagccag
gcgggcgagccccccgctctggactgccccttctgggccaagctgctggacacggaggcc
atggtgcagctgccggctcgggctgcacgggagctgagcaaagagcaagccgggatgctg
caggccgtgaccaatggggacgagcgactggggctcttcagacaggaggggctgctgcgc
aggcggggggccctgcgcccaggggaccgggtccgggtccagatcacctcggcctccggg
gaaaaggtccggggtgtcctgcgctaccggggacccatgggagacagcaaggagcaggct
ggagtcatctttggggtggagctggtgggatcagcggctgggaagggttttaccgacggc
tccttcagaggccagaagttcttctcatgccgggagaactgcggggtttttgtgcctgtg
agccggattgagccggatgagggggccgagtgcagccccctgatagctccccggggcagc
cgccgggcatgcaccaggctccagctggccacaggggaccccctcaaatcttctccaccc
ctggagctcggagatcgggtcttcttcaagatgggtgacagcgcccctgggggcactgtg
tttttctgcgactatctgcccaagaaggagatggctggggtcttcgtggggatctgcctg
gatcagcctgttggctcatgggatggcaaattcagtggccaatcgctctgccacttcccc
tctccggagcacgggatcctcctgccaatcaccaaagtccataaagaaaaggctgatgaa
ggccccaaggccttgagtgatgacccctccctaaggctcctcgatgaccccccatccccc
tcctccattcggtatccacccaggccggaatgggggtcccctcatggctctccctcctcc
ctgttgatggggggcactgaggagcagggggaaggggagaaggaggaaggagaggaggag
gagctggcttttcctctgctggaaatcaactcaatggtggaggtgcacgacccccccatc
tacggggtgatccgctggattggggcgccgccggatgtgggggagaccattgcagggctg
gagctggaggagccgctgccctcaggctgcacggacgggatctaccgagggatgcggtac
ttccagtgcccgcccggcaaggccctcttcgtcaagctacgccactgccggcccgatgcc
cgcttcggggctccccagccccctgagaaccccgtgctgcgctgcaactcactggctttc
agggtctatgccagcgagcgggtgccagaggacacccccccagggctgggtgaagagggg
gggcagcgcctgatgggctggaagaaagggatccagggccattgcaactcctgctacctc
gatgccaccctcttctgcatgtttgccttcagctccgtgctggactcgctgctgctgcgc
cccgcggacaagaacgatggggcgtcttacgaggagacccgggacctgctgagaactgag
atcgttaaccccctgcgcaaacacggctacgtctgcgccaccaaggtgatgtccctgcgg
cgggtcctggaggcagctggacactccccaggcttcaccagcgaggagaaagaccccgag
gagttcctcaccctgctgttccgggtgctgaagatggagcccctctttaagatccggtca
gcggacaaggacccccagggctgcatcttctaccagatcttcatggagggtggtgcaggg
ggggcaggccggggggtccccacagtgcagcagctgctggaggggtcactggtcgccggt
gacctcaagttcactgaggctccctcctgcctcatcctgcagatgccccgcaatggcaag
gactacaaggccttcgccaccatcctgcccagcctggagctggacctcactgacctgctg
gaggacaccccccgggagtgctgtatctgccaggatctggcgcggagcgaatgccccgag
tgctacggggaccccagcatcggggcagggagcacccgtcagtactgcactgtctgctgg
cagcaggttcaccgtcaccgtgcccggcgctcccaccacccccgcgccctgcgcctaccc
ccagagctggagcacctgccacccccaccaggccccctgccccgccagactatgcagctc
tacgccgccctctgcatccagaccagccactatgtggccttcgcccgccacggtccgcac
cgcggccaatggctcttctttgacagcatggccgaccgccagggtggccagaatggcttc
aacatcccacgggtcacaccttgcccggaggtggccgactacctggagatgagcccggag
gagctccaggtgctggaccccaagtccctgcccccctgcgcccgacgcctgctctgtgat
gcctacatgtgcctctaccacagccccacccttgggctctacaaatag
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