Caretta caretta (Loggerhead turtle): 125622371
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Entry
125622371 CDS
T09292
Symbol
CHRNA4
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4 isoform X1
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04080
Neuroactive ligand-receptor interaction
ccay04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125622371 (CHRNA4)
04082 Neuroactive ligand signaling
125622371 (CHRNA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125622371 (CHRNA4)
Ion channels [BR:
ccay04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
125622371 (CHRNA4)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
125622371
NCBI-ProteinID:
XP_048676346
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Position
14:6320428..6354436
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AA seq
624 aa
AA seq
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MGFLVSKENLLLFLWANVFPVCSHVETRAHAEERLLKKLFSGYNKWSRPVANISDVVLVH
FGLSIAQLIDVDEKNQMMTTNMWVKQEWYDYKLRWDPLEYENVTSIRIPSELIWRPDIVL
YNNADGDFAVTHLTKAHLFYDGRIKWMPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYD
KAKIDLVSMHSHVDQLDYWESGEWVIINAVGNYNIKKYECCTEIYPDITYFFIIRRLPLF
YTINLIIPCLLISFLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPL
IGEYLLFTMIFVTLSIIITVFVLNVHHRSPRTHTMPDWVKRIFLDVVPRLLFMQRPAAVK
DNCKKLIESMHKIASSPQLRSETKVEPKFTTSSSNSPQSKEPSPTSSFCGHLEEQAKPQT
VGKSPSLQYSVLHQEPAQASCSLLQPPCHLLSDTQSMSIPKSRSLSIQQMYSPNKVEDGS
IRCRSRSIQYCYLQEESSQNNGQTSGSPASQRYHLNEKQPQSKASQCKCKCKKNVATSSS
EQGTKTLSTKEQHVLLMSPALKLAVEGVHYIADHLRAEDADFSVKEDWKYVAMVIDRIFL
WMFIIVCLLGTVGLFLPPWLAGMI
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcctagtttctaaagaaaaccttctcctcttcctttgggcgaacgtcttccct
gtgtgcagccatgtggaaacccgagcccatgcagaggagagactcctgaagaaactcttc
tcgggctataacaagtggtcccgacctgtagccaacatttcggacgtggtcctcgtccat
ttcggattgtccatcgcgcaactcattgacgtggatgagaagaatcaaatgatgaccacg
aacatgtgggtgaagcaggagtggtatgactacaagttacgctgggatcctctggaatat
gagaacgttacatccatccgcatcccttcagaactcatctggaggccggatattgttctc
tacaacaatgcagatggggactttgcagtcacccacctgaccaaagcccaccttttttat
gatggaagaatcaagtggatgccccctgctatctacaaaagctcctgtagcattgatgtc
accttcttcccctttgaccagcaaaactgcaccatgaagtttggctcctggacctatgac
aaagccaagatagacttagtgagcatgcacagccatgtggaccaactggactactgggag
agtggagaatgggtcatcatcaatgccgtggggaattacaacatcaagaaatatgagtgc
tgcacagagatctaccctgatatcacctacttctttattatcaggaggctgcccttattc
tacacaattaatctgatcatcccctgcctccttatctccttcctgactgtcttagtcttc
tacctgccttcagagtgtggtgagaagatcaccctttgtatctcagtgctgctgtcactg
actgtgttcctgctgctcattacggagatcatcccttccacctccttggtcatccccttg
attggagaatatctgcttttcaccatgatatttgtcaccttgtccatcatcatcactgtc
tttgtgctcaacgtgcaccaccgctccccccgcacccacaccatgcctgactgggtgaag
cggatctttctcgatgttgtcccacgcctccttttcatgcaacggcccgcagcggtgaag
gacaattgcaagaagctgattgagtccatgcacaaaatagcctcctctccgcagcttcgg
tctgaaaccaaagtggagcctaagtttactacctcctcttcaaacagccctcagagcaaa
gaaccatcacccacctcttccttctgtggccatcttgaggagcaagccaaaccccagact
gttggcaagtcaccttctctccaatactctgtgctacaccaagagccggcacaggctagc
tgctccttgctccagcccccctgccatctgctgagtgacacccagtccatgtccatcccc
aagagcagatcattaagcatccagcaaatgtacagcccaaacaaagtagaggatgggagc
atccgctgcagatccaggagcatccagtactgctacctgcaagaggagtcctcccagaac
aacggccagaccagtggctctccggcatctcagcggtatcatctaaatgaaaagcagccc
caaagcaaagcctcccagtgtaaatgcaagtgtaaaaagaatgtggcaaccagctcttca
gagcaaggaaccaaaactctcagcaccaaagagcaacacgtgttgctgatgtcccctgcc
ttgaagctggcagtggaaggggtccattacatcgcagaccacttgagagccgaggatgca
gatttctcagtgaaggaagactggaagtatgttgcaatggtgatcgacagaatcttcctt
tggatgttcatcatagtctgcttactgggcaccgttggtctcttccttcccccttggctc
gcaggaatgatctaa
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