Caretta caretta (Loggerhead turtle): 125622426
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Entry
125622426 CDS
T09292
Symbol
CTCFL
Name
(RefSeq) transcriptional repressor CTCFL isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125622426 (CTCFL)
03036 Chromosome and associated proteins [BR:
ccay03036
]
125622426 (CTCFL)
Transcription factors [BR:
ccay03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125622426 (CTCFL)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125622426 (CTCFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
Zf-C2H2_ZNF451_C
zf-C2H2_15
zf-C2H2_6
A24_N_bact
zf-C2H2_7th_ZNF462
zf-C2HE
zf-C2H2_ZN142
zf-C2H2_REST
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
125622426
NCBI-ProteinID:
XP_048676469
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All DBs
Position
14:10927323..10947485
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AA seq
691 aa
AA seq
DB search
MRCLSSFHCCLLGQVCLMMASQDSALPELFTKIKGAERTWDKAREDDGGGKISWVKERNS
ICDPDAEGLNGALPAKLLEEEGGNLELSPSPVQGEKHLIMLQTVHLKEGEEDVQGVSQLN
IQQQSGVHMVVQRGASVLQPLVVVQQGVGAQQNLPTGVAISIQDGVYTFHDVEVMQINVL
QEKVQAKDEENQSMDKPPGMLLIKLTQMFISMLIDRSKDLHAVEGKVQQLPPNEEGREKD
IFSVEKAKILSCKAKDDMSVSHYEHKEQEEEAVIKKTDILEAQTNTQHRKKGEKVIFHCD
LCAFTSLRISSLNRHMKTHSDEKPHVCHLCLKAFRTVTLLRNHVNTHTGTRPYKCSDCEM
AFVTSGELARHRRYKHTLEKPFKCSMCKYSSVEASKLKRHLRSHTGERPYNCYLCSYASK
DTYKLKRHMVTHSGEKPYECYVCQARFTQSGTMKIHILQKHSENVPRYQCPHCNTFIARK
SDLGVHLRNLHSYLAVAMKCRYCEALFHERYALIQHKKTHRNEKRFKCDRCSYACKQERH
LIVHMRTHTGEKPFTCVCCSKCFRQKQLLTVHFRKHHDSNFKPTVYECPKCGKGYSRWNN
MHKHAESCGLVRAKSVTRRKGNKGKKKRCDRLKHDVKQEAVDLGSFQDVSFVNTECCASE
IVPVVYGIETSTPREQKTEMTCEMILNMMDK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgccttagtagctttcattgctgtctcttgggacaggtttgtttaatgatggcc
tctcaggactcagccctgcctgagctgttcaccaaaataaaaggtgctgaaagaacctgg
gacaaggcaagagaagatgatggagggggcaagatatcctgggtgaaggaaagaaacagc
atctgtgacccagatgctgaaggcctaaatggagcccttccagccaagctgctggaagaa
gaaggaggaaacctggagttgtccccatctccagtacagggtgaaaagcatttgataatg
ctgcagactgtgcatttgaaggaaggggaagaagacgtccagggggtcagtcagttgaat
attcagcagcagagtggggtgcacatggtagtacaacgaggagcaagtgtcttgcagccc
ttggtagtagtgcaacagggagtaggtgctcagcagaatctacccacaggtgtagcaata
agtatacaggatggtgtttatacatttcatgacgtggaggtgatgcagattaatgttttg
caagaaaaagtacaggcaaaagatgaagaaaaccagtccatggataaaccaccaggaatg
ctactgattaagttaactcagatgttcataagtatgctgattgacagaagtaaagatcta
catgcagttgaaggtaaggtccagcaactgcctccaaatgaagagggaagagaaaaggac
attttcagtgttgagaaagcaaagatcttgagctgtaaagccaaagatgatatgtcagtg
tcacactatgaacacaaagagcaagaagaagaagcagttataaaaaaaactgacattcta
gaagctcaaacaaacacacagcataggaaaaaaggggaaaaggtgatcttccattgtgat
ctgtgcgcattcacctctcttagaatatcaagtcttaatcgtcacatgaaaacccattct
gatgaaaaaccccatgtgtgtcacctctgccttaaggctttccgtacagtcactctcctg
cgtaaccatgtgaatacacatacagggaccagaccgtataagtgcagtgactgtgagatg
gcatttgtgaccagtggtgagcttgcacgacacaggcgatataagcacactctagaaaaa
ccctttaagtgctcaatgtgtaaatattctagtgtagaagcaagcaaattgaagcgtcac
cttcgttcacatacaggagagcgtccttataactgttatctctgtagttatgctagcaaa
gatacctataagctgaaaagacatatggtaactcattcaggagaaaaaccctatgaatgt
tatgtttgtcaggccagattcacacaaagtggtaccatgaaaatccatatattacagaag
catagtgaaaatgtgcccagataccagtgtccacattgtaacacatttattgcaagaaaa
agtgatttgggcgttcacttacggaacctgcattcctacctggctgtagcgatgaagtgc
cgttattgtgaagctcttttccatgagcgctatgctcttattcagcacaagaaaactcat
agaaatgaaaagcgattcaaatgtgatcgatgcagttatgcatgcaagcaggaacgacac
ttgattgtgcatatgcgtacgcatactggtgagaaacccttcacttgtgtatgttgcagc
aaatgcttccggcagaagcagcttctaactgttcacttcaggaaacaccatgattccaat
tttaaaccaacagtttatgaatgccctaaatgtggcaagggctattcacgctggaataat
atgcataagcatgctgaaagctgtggattggtgagggcaaaatctgttacacgccgcaaa
ggaaacaagggcaaaaagaaaagatgcgacagactaaaacatgatgttaagcaagaagct
gttgacctgggatcattccaagatgtttcctttgtgaacacggaatgctgtgccagtgag
attgtccctgtcgtatatggaatagaaacaagtactccgagggagcagaaaacagaaatg
acttgtgaaatgatcctcaacatgatggacaaataa
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