Caretta caretta (Loggerhead turtle): 125622787
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Entry
125622787 CDS
T09292
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccay03009
]
125622787 (DDX55)
Enzymes [BR:
ccay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125622787 (DDX55)
Ribosome biogenesis [BR:
ccay03009
]
Eukaryotic type
Pre-60S particles
Helicases
125622787 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
CTT_SPB4
Cas3-like_C_2
SBF_like
AAA_22
SHOCT
Motif
Other DBs
NCBI-GeneID:
125622787
NCBI-ProteinID:
XP_048677115
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All DBs
Position
15:8523138..8538287
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AA seq
595 aa
AA seq
DB search
MEGVTEGRWECLPVTLSPGVLQTLRELGFPHMTPVQSATIPLFMNNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKMQVGAIVITPTRELAVQIDEVLSHFTKHFPQFSQILLIGG
RNPIEDIEKFKEHGGNIIIATPGRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMG
FEASLNTILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPT
RLENYYMICKADEKFNQLVHFLRRHKQEKHLVFFSTCACVEYYGKALESLVKNVKIMCIH
GKMKHKRNKIFTEFRKLPSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTA
RIGHLGSALVFLLPMEESYVNFLSINQKCPMQEMKPLKNVVDVLPKLKSLALADRAMFEK
GMKAFVSCVQAYAKHECNLIFRIKDLDFASFARGFALLRMPKMPELKGKCFSDFVPVSID
TDSIPFKDKNREKQRQKLLEQQRKERQENEGKRKFIRNKAWSKQKAKKEKKKKITTKRRR
DEGSDIEDEEMEELLNDTRLLKRLKKGKISEEEFEKRLLSSERKVKAVVDSESED
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggagggggtgaccgaggggcggtgggagtgtctgcccgtcacgctcagcccgggcgtc
ctgcagaccctgcgggagctgggcttcccccacatgacccccgtgcagtctgcaaccata
cctttgtttatgaacaataaagatgttgctgcagaagcggtaacaggcagtggcaaaaca
ttagcttttgtaattcccatattagaaattctcctcagacgggaagagaagttaaagaaa
atgcaggttggagccatagtcatcacacccacaagagagttagctgttcagattgatgaa
gtgctatcacatttcacaaaacacttcccccaatttagccagattcttttgatcggtggt
aggaatccaatagaagatattgaaaaattcaaagaacatggtgggaacatcattatagcc
acaccaggccgtctagaggatttgttcagaagaaaagcagatgggctggatttagcaagt
tgtgtgaaatcacttgatgtgctggtattggatgaagcagacagacttctagatatggga
ttcgaagcaagtttaaataccattctggactttttgcccaagcagagacgaacaggtctg
ttctcagcaactcagactcaagaagtagagaacctggtgagagcaggtctccgaaatcct
gtccgcatctcagtgaaagagaagggagtggcagcgagtagcactcagaaaacacccaca
cggcttgaaaattactatatgatatgcaaagcggatgaaaaatttaatcagttggtgcat
tttcttcgacgacacaagcaggaaaaacatctagtctttttcagtacctgtgcctgtgtg
gaatattatgggaaagctctggaatccttagttaaaaatgtgaaaataatgtgcattcat
gggaaaatgaaacataaacgtaacaagatttttaccgagtttcggaaactcccaagtggc
attttagtttgcactgatgtgatggcccgtggcatagacattccagaagtaaactgggtt
ttacaatatgatccacctagcagtgcaagcgcctttgtgcatcgctgtggtcgaacagct
cgaattggccatttaggcagtgcgcttgtgtttttgcttcccatggaagaatcttacgtt
aattttctctcaataaaccaaaagtgccccatgcaggaaatgaaaccactgaaaaatgtg
gtagatgttcttccaaaactgaagtctctggctctggctgacagagccatgtttgagaaa
gggatgaaagcatttgtatcttgtgtgcaggcctatgccaaacatgagtgcaatcttatc
ttccgaataaaagatctggactttgctagttttgctcgaggttttgccctgctgaggatg
ccaaagatgcctgaactaaaaggaaagtgtttttcagactttgttcctgtcagtattgat
acagactccattccattcaaagataaaaatagagaaaaacaaaggcaaaaactgttagag
caacaaagaaaggaaagacaagaaaatgaaggaaaaagaaaattcataaggaataaagcc
tggtcaaagcagaaagccaaaaaggagaagaagaagaaaattacaacgaaacggagaaga
gacgagggctcagatattgaagatgaggaaatggaggagctgctgaatgacacacgactt
ttgaaaaggttaaaaaagggtaaaattagtgaggaagagtttgagaagaggctgctgagc
agtgagagaaaagtcaaagctgtggttgactcagagtctgaagattga
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