KEGG   Caretta caretta (Loggerhead turtle): 125622788
Entry
125622788         CDS       T09292                                 
Symbol
GTF2H3
Name
(RefSeq) general transcription factor IIH subunit 3 isoform X1
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay03022  Basal transcription factors
ccay03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    125622788 (GTF2H3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    125622788 (GTF2H3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccay03021]
    125622788 (GTF2H3)
   03400 DNA repair and recombination proteins [BR:ccay03400]
    125622788 (GTF2H3)
Transcription machinery [BR:ccay03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     125622788 (GTF2H3)
DNA repair and recombination proteins [BR:ccay03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     125622788 (GTF2H3)
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 125622788
NCBI-ProteinID: XP_048677116
LinkDB
Position
15:8548053..8557982
AA seq 307 aa
MSADDELNLLVIIVDTNPIWWGKKVLGESEFTLSKCLDAVMVLGNSHLFMNRSNKLAVIA
SHTQESRFLYPGKHWAFADLFGDGGSFVESNCSGSKDGKYELLTAINEVIAEELKDLMTK
TDMKGQQTETLLAGSLAKALCYIHRMNKEVKASQEIKSRILVIKAAEDSALQYMNFMNVI
FAAQKQNILIDACVLDSDSGLLQQACDITGGKYLKVPRMPSLLQYLLWVFLPDQEQRSQL
ILPPPIHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICSTCETAFKISLPPVMKAKK
KKLKLAI
NT seq 924 nt   +upstreamnt  +downstreamnt
atgagcgcagatgatgagctaaatctcttagtcatcattgttgacaccaaccctatctgg
tgggggaagaaagtgctaggggaatcagagtttacattatcaaaatgcctggatgcagtc
atggtgttgggaaattcacatctatttatgaatcgcagcaacaaacttgctgtaatagca
agtcatacacaagaaagtcgtttcttgtaccctggaaagcactgggcatttgcagatctc
tttggagatggtggtagtttcgtagaatctaattgctctggcagcaaagatggaaaatat
gaattattaactgcaataaatgaagtaatcgcagaggagcttaaagacctgatgacaaaa
actgacatgaagggccagcaaacggaaactttgttggcaggatcacttgctaaagcactt
tgttatattcacaggatgaacaaggaagtaaaagccagccaagaaattaaatcaagaatt
ttggtcataaaagctgcagaagacagtgcattgcagtatatgaatttcatgaatgtgatc
tttgcagcacagaaacagaatattttgattgatgcctgtgttttggactctgattcagga
ctcctacagcaggcttgtgacattacaggaggcaaatacttgaaagtgccccggatgcca
tcccttttgcagtatttgctgtgggtatttcttcctgatcaagagcaaagatcccaacta
atccttccaccccccattcatgttgactatcgagcggcttgcttctgtcatcgaaatctc
attgaaataggttatgtctgctctgtgtgtttgtcaatattctgcaacttcagccctatt
tgtagcacgtgcgagactgcttttaagatttcattaccacctgtcatgaaggccaagaaa
aagaaactaaaactagctatatag

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