Caretta caretta (Loggerhead turtle): 125622872
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Entry
125622872 CDS
T09292
Symbol
SCARF2
Name
(RefSeq) scavenger receptor class F member 2 isoform X1
KO
K24319
scavenger receptor class F member 2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
125622872 (SCARF2)
Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
125622872 (SCARF2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_STAB1-2
EGF_C8A_B_C6
EGF_PEAR1L
EGF_Teneurin
Tweety
Motif
Other DBs
NCBI-GeneID:
125622872
NCBI-ProteinID:
XP_048677369
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All DBs
Position
15:complement(27653560..27761354)
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AA seq
1044 aa
AA seq
DB search
MWNFLAGRAPSCCCREGRGGGGGGAARLSHCSFRPGPRRQPPPGSQGCGARAGERTALPR
PGAAALQQPGARAKETPMEAPGGPAAGLRGLPPPGRAGALLLLLLSWGAAQELRPGGRNV
CGASGFSGSLCCPGWRQQGDECLIAVCEGNFTCKENEVCVRPSECRCRHGYFGANCDTKC
PRQFWGPDCKEMCSCHPNGQCEDVTGHCTCNPNRWGPKCENACLCKHGKCDQKTGKCSCE
PNWWGPQCSSSCYCSLNSQCDQQTGTCICQPGWWGRGCNNQCVCNNSPCEQFTGRCQCRE
RMFGPRCDRYCQCYKGKCNQVDGTCTCEPGYRGKYCREPCPAGFYGQGCRRRCGQCKGLQ
PCTIADGRCLACEAGWNGTKCDQACLSGFYGDGCEKICPLCKDGHTCNHINGKCSHCNPG
WIGDRCETKCRNGTYGENCAFVCSDCFNGECHFETGRCLCRAGSHGTYCNLTCPAGQYGV
NCAKSCSCHDDTCDPLTGACHMEANQRMGVIAAGALLALLLILLLSLLCCCCVCRKKEEA
QGANQDPAASKKSPGRLCGRFSRISMKLPRIPLHRQKLPKVVVAHHDLENTMNCSFIEPP
SVVEQPSPSWSSRGSFSSFDTTDEGPVYCVPHEEGVGESKERGPACSLVEKLAPPISAEE
AGEYTFLKETGSVKAFQTDSSETPLLKSSDSERSSCGSGSTSGALYAKIARLSKQSKDED
ENTMDTKSPGVNGKSPSPERTKPPPPDPSTKPKVSWIHGKYNSNQSNSLPAPSRSPERAA
MQPDCAEHTQAKRKRSPSETSAGLHGKADDKGSARSKEKAQKHLKELSFPEGKASFSGEP
QSPSKPKQKTKASSEQMENINGAVQNALKKMGNYHPDRKGGEGKEVPRSPSHSKPRSEAV
HPHLSSEAATLLAAQLKEKTQSLNKGDGSTRQNGVSPLQPQREKPTPPQKAKRSVATSSS
QKSSKPVLPTSPNLQKLISPVSETTVNEAKRAEKQNSSSSSQDHASLGDQTSKKTPIKKP
PRKKSREATLEQPKAAIMPPQTVQ
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtggaatttcctggctggccgggcgccctcctgctgctgccgagaggggcgcggagga
ggcggcggcggggcagctcggctctcgcactgcagcttccggccgggaccccgcaggcag
ccgccgccggggagccagggctgcggcgctcgggccggagagcggaccgcgctgccccgc
ccaggagccgccgcgctgcagcagcccggcgcccgagcgaaggagacgccgatggaggcg
cctgggggcccggccgccgggctccgggggctgcctccgcccgggcgggctggagcgctg
ctgctgctgctgctgagctggggagctgcccaggagctgcgtcccggcgggaggaacgtg
tgcggagcaagcggcttctctgggtctctgtgctgcccaggatggaggcaacaaggagac
gagtgtttgatagccgtgtgcgaggggaatttcacctgcaaggagaacgaggtgtgcgtg
agacccagtgagtgccgctgccgccatggatacttcggggccaactgtgacaccaaatgt
ccccgccagttctggggtccagactgcaaggaaatgtgcagctgccaccccaatggccag
tgtgaggatgtcacgggccactgcacatgcaaccccaatcgctgggggcccaagtgtgag
aacgcctgtctctgcaagcatggcaaatgtgaccagaagacgggcaagtgctcctgtgag
cccaactggtggggtccccagtgctccagctcgtgttactgcagtctcaactcccagtgt
gaccagcagacggggacgtgcatctgccagcccggctggtggggccggggctgcaacaac
cagtgcgtctgcaacaactcgccatgcgagcagttcactgggcgctgccagtgccgggag
cgaatgtttggcccgcgctgcgaccgctactgtcagtgctacaaggggaaatgtaaccag
gtggatggtacctgcacctgtgagccgggatatcggggcaagtactgccgggagccctgc
ccagcgggcttctacggacaaggctgcaggaggcggtgtgggcagtgcaaagggctgcag
ccctgcaccatagcggacggccgctgcctggcatgtgaagctggctggaatggcaccaag
tgtgatcaggcctgcttgtcaggcttctacggagacggctgcgagaaaatctgccccctg
tgcaaagatggccacacctgcaaccacatcaatggcaagtgctcgcactgcaatcccggc
tggattggagacaggtgtgaaaccaagtgtcgcaacgggacatatggcgagaattgtgcc
tttgtgtgcagtgactgcttcaacggggagtgccactttgagacgggcagatgcctctgc
cgggcaggctctcacggcacctactgtaacctgacatgcccagctggtcagtacggagtc
aactgcgcgaagtcctgcagctgccatgatgacacatgtgaccccctgactggagcctgc
cacatggaggccaatcaacggatgggggtgattgcagcaggggccctgctggctttgctg
ctcatcctgctcctctcgctgctctgctgctgctgtgtctgtcgcaagaaggaggaagct
cagggtgcgaaccaggacccagcagcaagcaagaaatcgccagggcgcttgtgtggccgg
ttcagtcgaattagcatgaaactcccccgaattcctctgcatcgccagaaactgcctaaa
gttgtcgtggctcaccatgacctggagaacaccatgaactgcagtttcattgagccaccg
tctgtagtggagcaaccatctccctcctggtcctcccggggctccttctcctcctttgac
accaccgatgagggaccagtgtactgtgtaccccatgaggagggtgtgggtgaaagcaaa
gagagaggccctgcctgcagtctggtggagaagctggcacccccaatcagcgcagaggag
gctggagagtacaccttcttgaaagagacgggctccgtcaaggccttccaaacagacagc
agcgaaactcccctgctcaaatcctctgacagcgaaaggtcgtcctgtggctctggctcc
acaagcggagccctctatgccaaaatcgcccgcctctccaagcagtccaaggacgaagat
gaaaatacaatggacaccaaaagccctggagtgaatggtaaatccccctccccagagaga
accaagccccctccccctgatccctccacaaagcctaaagtgtcctggattcatgggaag
tacaactccaaccagtccaactcactacccgctcccagcaggtcccccgagagagcggct
atgcagcctgattgcgccgagcacactcaggccaagagaaagagaagcccgagtgagacc
tcggctggcctccatgggaaagctgacgataagggcagcgcgaggagcaaagagaaggcg
cagaaacatctgaaagagctcagcttcccagagggcaaagcctccttctctggggagccc
cagtcaccatccaagcccaagcagaagaccaaggccagttcggagcagatggagaacatc
aatggggctgtccaaaatgctctgaaaaaaatgggaaactaccacccagacaggaaagga
ggagaaggcaaggaagtcccccggagccccagtcacagcaagccacgctctgaggccgtc
cacccccatttgtcttcagaggcagccactttactggctgctcaactgaaggaaaagact
caaagcctcaacaagggcgatggcagcacccggcaaaatggggtgagccctttgcagccc
cagagggagaagcccacccctccgcaaaaagccaagcgctctgtggccaccagcagcagc
cagaaatccagcaagcctgtgctgccaacctcccccaacctgcagaaactgatcagcccc
gtgtcggagaccacggtcaatgaggccaaaagggcagagaagcaaaattccagcagcagc
agccaggaccacgcatccctgggtgaccagaccagcaaaaaaacacccattaaaaagccc
cctaggaagaagagcagagaagccaccttggagcagcccaaagcagccataatgccccct
cagacagtgcagtag
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