Caretta caretta (Loggerhead turtle): 125622883
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Entry
125622883 CDS
T09292
Symbol
HNF1A
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125622883 (HNF1A)
Transcription factors [BR:
ccay03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
125622883 (HNF1A)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
KPBB_C
Motif
Other DBs
NCBI-GeneID:
125622883
NCBI-ProteinID:
XP_048677390
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Position
15:complement(22206275..22223763)
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AA seq
649 aa
AA seq
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MVSKLSHLQVELLGALLESGLTKETLIKALGEVDPYALQSESQRAISAIQAEKGEPCAEI
PNLPNGMEESRMSEEETSDDGEEFTPPIMKELENLSPEEAAHQKAVVERLLQEDPWRVAK
MVKSYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQF
THAGQGLVAEEPMGDDLPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECN
RAECIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTYSGPQPSSAPPL
TSHNSSSLQPTPAISPSKVHDQPHLWEPSLSFSDIGMRYNQQPANEAESSSSNHHGNSSM
VTTQTILHQVSPPGLEPSQNLLTTDTKLISAHGGPLPPVSTLTALHSLEQNPHTLSQQTQ
NLIMASLPGVMAIGAGETSSLAPAFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQP
VQFSQQLHPSYQQPIMQQVQSHINQSPFMATMAQIQSPHALYSHKSEVAQYGHTGLLPQT
MVITDTANLSALTNLTPTKQVFTSESETHTESGIHTSVSQTPTIHLQNQDTTIQHLQPGH
RLTPSPAVSSSSLVLYHSSDSTNSHSHLLPSTHSVIETFIPTQMASSTQ
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggtctctaagctgagtcatcttcaggtggagctgctgggagcactgctggagtcaggg
ctaaccaaggagaccctgatcaaagcgctcggggaagtggacccctatgccctccagagt
gaaagccagcgtgccatcagtgccatccaggcagaaaaaggggaaccctgtgctgaaatt
cccaatctgcccaatgggatggaagaatccaggatgtccgaggaggaaacctccgacgat
ggggaggaattcacccctccaataatgaaggagctggaaaacctgagtccagaggaggct
gctcaccagaaggctgtggtggagagactattacaagaggatccctggagagtagcaaag
atggtaaaatcctacctccagcagcacaacatccctcaaagggaggtggtggacactaca
ggtttaaatcagtctcacctctcacagcacctcaacaaaggcacacccatgaaaacccag
aagagagctgccctctacacctggtacgtccgcaagcagcgagaggtggcccagcagttc
acacatgctggtcagggactcgtggcagaggagcccatgggagacgacctgcccaccaag
aaagggagaagaaaccgctttaagtggggtcctgcctcacaacagatcctattccaagct
tacgagagacagaagaacccgagcaaggaggagagagaggcattggtggaggagtgcaac
agggcagagtgcattcagcgtggcgtctccccatcccaggcccaaggtctgggctcaaac
ctggtcaccgaggtgagagtttataactggttcgccaaccgtaggaaggaggaggccttt
cggcacaagctagccatggatacctacagtgggccgcagcccagctctgctcccccactg
acctctcacaactcttcctcccttcagccaacgcctgctatctcgccaagcaaagtacat
gatcagcctcatctgtgggaaccaagtctctccttttctgacataggaatgaggtacaat
cagcagccagccaatgaggccgagtcttccagcagcaatcatcatgggaacagctccatg
gtgaccacccaaaccatcctccatcaggtctctccccctggactggagccaagccagaac
ctattgaccacagacactaagctgatctctgctcacgggggacctctccctcctgtcagc
accctgaccgctttgcacagcctagagcaaaatccacacacattgagccagcaaacccag
aatctaatcatggcttcactgcctggtgttatggcaattggagctggtgagacctcatcc
ctggcaccagcattcaccaacacaggggcctccaccctggtaataggcctagcctccacc
caagctcagagtgttcctgtgataaacagcatgggaagcagccttactacccttcagcct
gtccagttctcccagcagctccacccatcttaccagcagcccatcatgcagcaggtccag
agccacatcaatcagagccccttcatggccaccatggcccagatacagagcccccatgct
ctctacagccacaagtctgaagtggcccaatatggacacactggccttttaccccagacc
atggtgataactgatacagcaaatctcagtgccctgactaacctgacaccaaccaaacag
gtgtttacatctgaatcagagacccatacggagtccgggatccacacgtcagtgtcacag
acaccaacaatacatttacagaaccaagacacaaccattcagcaccttcagccaggccat
cgcctcaccccaagcccagctgtctcctctagcagcctggtgctctaccacagctctgac
tccaccaacagccacagccacttgctgccatctactcacagcgttattgagaccttcatc
cccacacagatggcatcctccactcagtaa
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