Caretta caretta (Loggerhead turtle): 125622981
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Entry
125622981 CDS
T09292
Symbol
PUS1
Name
(RefSeq) pseudouridylate synthase 1 homolog isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccay03016
]
125622981 (PUS1)
Enzymes [BR:
ccay01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
125622981 (PUS1)
Transfer RNA biogenesis [BR:
ccay03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
125622981 (PUS1)
Prokaryotic type
125622981 (PUS1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
125622981
NCBI-ProteinID:
XP_048677666
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Position
15:13761216..13779083
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AA seq
479 aa
AA seq
DB search
MGAGRGKVSDPDGAASFLSGLGPRGGRPAPQRGGDPPSWAPDFRKKGDELENVQRSVTQT
IKGLGYVPYEGRVKKLGLGFAMAGDMRATAASQAKRFKSSNEETENQEENGHQDKRFKRS
QKDVEDQNKKFPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALIRSGCIPENH
GEDMKKMSFQRCARTDKGVSAAGQIVSLKIWLIDDVLEKINNCLPSHIRILGLKRVTGGF
SSKNKCDARTYFYMLPTFAFAHKDRDIQDKTYRLNKETLEKVNKLLACYKGTHNFHNFTS
QKGPKDPSAKRYIMEIYCEEPFVKECMEFAVIKVKGQSFMMHQIRKMIGLVIAIMKGYAL
ESIMERSWGEEKVDVPKAPGLGLVLEKVHFEKYNRRFGNDGLHEPLEWTEEEEKIAVFKE
QHIYPTIINTEREEQSMVNWLSTLSIHDFNATSSGVQVNDRNSKSNDLEGSDGCDDDSD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcagggagggggaaagtgtctgatcctgatggtgcagcttccttcctttcaggg
ctaggtcctcgcggggggcgtccagcgcctcagcgggggggtgaccccccgtcctgggcg
ccagatttcaggaaaaagggggacgaattggagaacgtccagaggagcgtaacacagacg
attaaaggtctaggatacgtgccctatgagggaagagtgaaaaagctgggtttggggttt
gcaatggctggggatatgagagcaacggctgccagtcaggcaaaaagatttaagagcagc
aatgaggaaacagaaaaccaagaggaaaatggacaccaagacaaacggttcaagagaagc
caaaaggatgtggaggatcagaataaaaaatttcccaaaaggaagattgttctgttgatg
gcatattctgggaaaggctaccatgggatgcaacgaaacgtggggtcctcgcagttcaag
acgatcgaggatgatttagtatctgccctcattcggtcagggtgcattccagaaaaccac
ggtgaagatatgaaaaaaatgtcctttcagaggtgtgcgcgaacagacaagggcgtgtct
gccgctggacagattgtgtcactgaagatctggctgatagatgacgttttagaaaagatc
aataactgtcttccttctcatatcagaattctgggactgaaaagagtcaccgggggattc
agctccaagaacaagtgtgatgccagaacctacttctacatgctaccaacgtttgccttt
gctcataaagaccgtgatatccaagacaaaacttaccgtctgaacaaagagactcttgag
aaagtcaacaagcttcttgcgtgctacaaagggacccataacttccacaacttcacttct
cagaagggacccaaagaccccagtgccaaacggtacatcatggagatatattgcgaagag
ccctttgtgaaggagtgcatggaatttgcagtgataaaggtgaaaggacagagttttatg
atgcaccaaataaggaagatgattggtttggtgatagctataatgaaaggctatgcactg
gagtccatcatggagcgcagctggggagaggaaaaggtggatgtccccaaagctccaggg
cttgggctggtcttggaaaaggtgcactttgaaaagtacaatagacgctttggaaatgat
ggtttacatgagccactggaatggacggaggaggaggagaagatcgctgttttcaaagag
caacatatctatcccactattatcaacactgaaagggaggagcaatccatggtgaactgg
ctgagcacgctctccatccatgacttcaatgccacttcttcaggggtacaagtcaatgac
agaaactcaaagagcaacgatcttgaaggcagtgatggctgtgacgatgactctgactga
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