KEGG   Caretta caretta (Loggerhead turtle): 125622981
Entry
125622981         CDS       T09292                                 
Symbol
PUS1
Name
(RefSeq) pseudouridylate synthase 1 homolog isoform X1
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
ccay  Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccay03016]
    125622981 (PUS1)
Enzymes [BR:ccay01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     125622981 (PUS1)
Transfer RNA biogenesis [BR:ccay03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    125622981 (PUS1)
 Prokaryotic type
    125622981 (PUS1)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 125622981
NCBI-ProteinID: XP_048677666
LinkDB
Position
15:13761216..13779083
AA seq 479 aa
MGAGRGKVSDPDGAASFLSGLGPRGGRPAPQRGGDPPSWAPDFRKKGDELENVQRSVTQT
IKGLGYVPYEGRVKKLGLGFAMAGDMRATAASQAKRFKSSNEETENQEENGHQDKRFKRS
QKDVEDQNKKFPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALIRSGCIPENH
GEDMKKMSFQRCARTDKGVSAAGQIVSLKIWLIDDVLEKINNCLPSHIRILGLKRVTGGF
SSKNKCDARTYFYMLPTFAFAHKDRDIQDKTYRLNKETLEKVNKLLACYKGTHNFHNFTS
QKGPKDPSAKRYIMEIYCEEPFVKECMEFAVIKVKGQSFMMHQIRKMIGLVIAIMKGYAL
ESIMERSWGEEKVDVPKAPGLGLVLEKVHFEKYNRRFGNDGLHEPLEWTEEEEKIAVFKE
QHIYPTIINTEREEQSMVNWLSTLSIHDFNATSSGVQVNDRNSKSNDLEGSDGCDDDSD
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgggcgcagggagggggaaagtgtctgatcctgatggtgcagcttccttcctttcaggg
ctaggtcctcgcggggggcgtccagcgcctcagcgggggggtgaccccccgtcctgggcg
ccagatttcaggaaaaagggggacgaattggagaacgtccagaggagcgtaacacagacg
attaaaggtctaggatacgtgccctatgagggaagagtgaaaaagctgggtttggggttt
gcaatggctggggatatgagagcaacggctgccagtcaggcaaaaagatttaagagcagc
aatgaggaaacagaaaaccaagaggaaaatggacaccaagacaaacggttcaagagaagc
caaaaggatgtggaggatcagaataaaaaatttcccaaaaggaagattgttctgttgatg
gcatattctgggaaaggctaccatgggatgcaacgaaacgtggggtcctcgcagttcaag
acgatcgaggatgatttagtatctgccctcattcggtcagggtgcattccagaaaaccac
ggtgaagatatgaaaaaaatgtcctttcagaggtgtgcgcgaacagacaagggcgtgtct
gccgctggacagattgtgtcactgaagatctggctgatagatgacgttttagaaaagatc
aataactgtcttccttctcatatcagaattctgggactgaaaagagtcaccgggggattc
agctccaagaacaagtgtgatgccagaacctacttctacatgctaccaacgtttgccttt
gctcataaagaccgtgatatccaagacaaaacttaccgtctgaacaaagagactcttgag
aaagtcaacaagcttcttgcgtgctacaaagggacccataacttccacaacttcacttct
cagaagggacccaaagaccccagtgccaaacggtacatcatggagatatattgcgaagag
ccctttgtgaaggagtgcatggaatttgcagtgataaaggtgaaaggacagagttttatg
atgcaccaaataaggaagatgattggtttggtgatagctataatgaaaggctatgcactg
gagtccatcatggagcgcagctggggagaggaaaaggtggatgtccccaaagctccaggg
cttgggctggtcttggaaaaggtgcactttgaaaagtacaatagacgctttggaaatgat
ggtttacatgagccactggaatggacggaggaggaggagaagatcgctgttttcaaagag
caacatatctatcccactattatcaacactgaaagggaggagcaatccatggtgaactgg
ctgagcacgctctccatccatgacttcaatgccacttcttcaggggtacaagtcaatgac
agaaactcaaagagcaacgatcttgaaggcagtgatggctgtgacgatgactctgactga

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