Caretta caretta (Loggerhead turtle): 125623010
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Entry
125623010 CDS
T09292
Symbol
SMPD4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay00600
Sphingolipid metabolism
ccay01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
125623010 (SMPD4)
Enzymes [BR:
ccay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
125623010 (SMPD4)
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Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
125623010
NCBI-ProteinID:
XP_048677743
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All DBs
Position
15:complement(20569150..20598464)
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AA seq
842 aa
AA seq
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MAVPHLQQPSFLLASLKADCMNKPFAQRCHDLEIVIEDFPAKELHAIFPWLVENIFGSLD
GIIIGWNLRCLHGRVNPTEYAIALDFLDPSGPMMKLVYKLQAEEYRYEFPVSYLPGPVKA
SMQERVLPECSLYHNKVQFPPSGGLGSNLALNPFEYYMFYFAISLITQRNSPTTHHVSPS
NSAYFSLVDTYLKWFLPTEGSVLPPPSSNPGGGIPSPAPRSPAVPFTSYGIHHTSLLKRH
IAHQPSVNADPASQEIWRSETVLKVFVEMWLHHYSLEMYQKMQSPHVKLEVLHYRLSISS
THHSSPAQSGYQALHAYQGRGDQRLHGCTPMREESFKPTEEHVLVIRLLVKHLHAFANSL
KPEPLSPSAHSHTASPLEEFKRVVIPRFVQQKLYIFLQHCFGHWPLDASFRAVLEMWLSY
VQPWRYAPEKPLQSSEPQPRSVSEKWAPFIQENLLMYTKLFVGFLNRALRTDLVSAKNAL
MVFRVAKVFAQPNLAEMIQKGEQLFLEPELVIPHRQHRIFMTPTLGGSFLSSWPPAITDA
SFKVKSHVYCLEGQDSQYKQMFGPEVRNLVLRLAQLIGQAKQTAKSISDHSAETMASQSF
LSWFRFSPSDMNGSYTGNDLDEIGQDSIKKTDEYLEKAQEYLCQIFRLNEAQLTQMMMNC
GAAQDENGKKQLPDCIESEDGLILTPLGRYQIINGLRRFEIEYQGDTDLQPIRSYENATL
VRLLFQLSSAINQRFADQMEILCSREDFIGSLCRYHLTNPFLAEKGRHSPALKQRSGRSR
RPRISLRFLASYRTLLSLFMMYFIASWFCIGPLACTFIILLGYLLYAVVMTFFTERWKPH
QH
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccctcacttacaacagcctagcttcctattggccagtttgaaggcagattgc
atgaacaagccctttgctcagaggtgtcatgatctggagatagtcattgaagattttcct
gccaaggaactgcatgccatcttcccatggctagtggagaatatttttggtagtttggat
ggcattatcataggttggaatcttcgctgtttgcatggaagagtgaatcctacagagtat
gctattgcgctggatttcctggatcccagtggcccgatgatgaagctggtttacaaactc
caagctgaggagtacagatatgaatttccagtctcctatcttccaggccctgtgaaggct
tcaatgcaagaacgagtcctaccagaatgctcgctataccacaacaaagtccagttccct
ccatctggaggcctgggctcgaacttggccctcaatccttttgaatattacatgttttac
tttgcaataagccttatcacacagaggaactctcctaccacccatcatgtcagcccttca
aacagcgcttacttcagtctggtggacacatacctgaaatggttccttcctacagaagga
agtgttcttcctccaccttcttccaatcctggcgggggcatcccttcacctgctcctaga
tccccagcagtgcctttcacttcttatggcatacaccacactagtctactgaaacggcac
attgcccatcagccttcagtgaatgctgatcctgcttcccaagagatctggagatcagaa
acagtgcttaaagtttttgttgaaatgtggcttcaccattactcactggaaatgtatcag
aaaatgcagtcccctcatgtcaagctggaggttctccactaccgactcagtatctccagt
acacaccacagtagtcctgcccaatccggctaccaggccctccacgcataccaaggaaga
ggagatcagagattgcatggctgtaccccaatgagagaggagtcatttaaacctacagaa
gagcatgtgttagtgataagactgctcgtgaagcatctacatgcttttgccaacagcctg
aaaccagagccactctcgccctcagcccattcccatacagccagcccactggaggaattc
aagagagttgtgattcctcggtttgtccagcagaagctctatatcttcctgcagcattgt
tttggccactggcctttggatgcctctttcagagctgtcctggagatgtggttaagctac
gtgcagccctggagatatgctcctgagaaaccacttcagagttcagagcctcagcctcgc
agtgtatcagagaaatgggctcccttcattcaagagaacttactgatgtataccaagcta
tttgtaggctttctgaaccgagctctccgcaccgatttggtcagcgctaaaaatgccctg
atggtgttccgagtagccaaggtctttgctcagcccaacctagctgaaatgatccagaaa
ggggagcagttattcctggagccagaacttgttatccctcaccgtcaacaccgaattttc
atgacccccactcttggtgggagcttcttgtcatcatggcctccagcaatcacagatgcc
tcatttaaggtgaagagtcatgtttactgcttggaaggacaggactcccagtacaagcag
atgtttggtccagaagtcaggaatttggtattaagattggcccagttaataggccaggcc
aagcaaacggcaaaatccatatcagaccactctgcagagaccatggctagtcagtccttc
ctatcctggtttaggttcagcccgtctgacatgaatggttcctatacaggcaatgaccta
gatgaaattgggcaagacagcatcaagaaaacagatgaatatttggagaaggcacaggag
tacctatgccagatctttcggttgaatgaagcgcagctgacccaaatgatgatgaattgt
ggagcagctcaggatgagaatggaaagaagcaacttccagactgcattgagagtgaggat
ggactaattcttacgcctcttggcaggtatcagatcataaatggcttacggcggtttgag
atcgagtaccagggagatactgaccttcagcccattagaagttatgaaaatgccactcta
gtgcgactgttgttccagttatcctcagcaattaatcaaaggtttgctgatcaaatggag
attctctgctccagggaagactttattggcagcttgtgtcgctatcatcttaccaaccca
ttccttgcagagaagggcaggcacagcccagcactgaaacaaagatcaggacgttctcgg
cgaccaaggatcagtctgagatttctggctagctacaggactcttctttctttgttcatg
atgtacttcattgcatcttggttctgcattggaccactggcctgcacattcattattctc
cttgggtatcttctttatgcagtagtaatgactttcttcactgaaaggtggaaacctcat
caacactaa
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