Caretta caretta (Loggerhead turtle): 125623157
Help
Entry
125623157 CDS
T09292
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3 isoform X1
KO
K06099
cold shock domain protein A
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125623157 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125623157 (YBX3)
03041 Spliceosome [BR:
ccay03041
]
125623157 (YBX3)
Transcription factors [BR:
ccay03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
125623157 (YBX3)
Spliceosome [BR:
ccay03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125623157 (YBX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
125623157
NCBI-ProteinID:
XP_048678000
LinkDB
All DBs
Position
1:209351635..209388084
Genome browser
AA seq
354 aa
AA seq
DB search
MSEAAQTSPAAAAAAPPPPTGPPAAATASPAQDAKPKSPASPSAPAGSASGDAAPASDSS
SAAPAADTEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS
VGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYYGRRRGPPRNYPG
EEEEEEGSGSSEGLDPLITEGHIPGSRNQLRRPQYRQRFFPPYRAGQTFDRRSRVYSHAA
DGTQGGDGEIKDGVPEGAQLHQQIHRNPSYRARYRRGPPRPRPAPVVGEAENKENQHEAN
AMSQQPSRRGYRRPYNYRRRPRPPSAPSQDGNETKVAEIPAENPAPVTEQSSAE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcggcgcagaccagccccgcggcggccgcggcagcccccccgcctcccacc
ggcccccccgccgccgccacggcctccccggcccaggacgccaagcccaagagccccgct
agcccaagcgccccggcgggcagcgccagcggagacgcggcccccgccagtgacagcagc
agcgcggcccccgccgcggacacggaaaagaaagttctggccactaaagttcttggcact
gtcaagtggttcaacgtcagaaacggatatggctttatcaacagaaatgacacaaaagaa
gatgtgtttgttcatcagaccgcaattaagaagaacaacccacggaaatacctgcgcagt
gttggtgatggagagactgtagaatttgacgtggtcgagggagagaagggtgcagaagca
gccaatgtcactggtccagatggagtccctgtggaaggcagccgttatgctgcagacagg
cgccgttaccgacgtggctattatggcagacgccgtggaccacctcgtaattacccgggt
gaggaggaggaggaggaggggagcgggagcagtgaaggattggatcctctcatcaccgaa
gggcatatcccagggtcacggaaccagctgcgccgcccacagtaccggcagcgcttcttc
ccaccttaccgcgcaggacagacctttgaccgtcgctcacgggtctattcccatgctgct
gatggcacgcagggtggtgatggggaaatcaaggatggggtcccagaaggagcacagctt
catcagcaaatccatcggaatccctcctatcgcgcgcgctatcgcagaggacccccacgt
ccacgccctgcaccagtggttggagaggctgaaaacaaggagaaccagcacgaggctaat
gctatgagccagcagccatcccgtcgtggataccggcgcccatacaattatcggcgacga
ccccgcccgcccagtgctccatcccaagatggcaatgagaccaaggtggccgaaatacct
gctgagaaccctgctccagtgaccgagcagagcagtgctgaataa
DBGET
integrated database retrieval system
