Caretta caretta (Loggerhead turtle): 125623159
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Entry
125623159 CDS
T09292
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccay03041
]
125623159 (TFIP11)
Spliceosome [BR:
ccay03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
125623159 (TFIP11)
Other components
Complex C specific factors
125623159 (TFIP11)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
125623159
NCBI-ProteinID:
XP_048677997
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Position
15:2346370..2357751
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AA seq
829 aa
AA seq
DB search
MSMSHLYGKDDDDDGDVEMEKFEITDWDLQNEFNPNRQRHWQTKEEATYGVWAEHDSDDE
RPSFGGKRSRDYSAPVNFISAGLRKAAAEEVIEEDSDEDEKPVKQEEFPKEFVPKKLKTG
GNFKPSQKGFIGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAK
QRKGKGALGAYGSERTSQSLQDFPVVDSEEEAEEEFQKELSQWRKDPNGGKKKPKYAYKT
VEELKAKGRIGKQLTAPQKELSQVKVIDMTGREQRVYYSYSQISHKHNIPDDNPQQPLGK
DSKPQAFALPELEHNLQLLIDITEQEIIQNDRQLQYERDMVVNLTHEIQKMSEVLSHEET
AISNLSKVLELVEECERRMQPNCDNPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIV
FPLMKDYFKNWDPLKDCMYGTEIIAKWKRLLENDQLLSHSGQDLATDAFHRLMWEMWMPY
VRNIITQWQPRNCGPMVDFLDSWVHVIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPI
HSWIHPWLPLMQSRLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKEVFTPGSWEAFM
VKNIVPKLGMCLNELVINPHQQHMDAFYWVIDWEGMVSVSSLVGLLEKHFFPKWLQVLCS
WLSNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSNVGGYMQPGAR
ENIAYLTHTERRKDFQYEAMQERREAENMAQRGIGMAASSVPMNFKDLIQTKAEEHNIVF
MPVIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcccatctctacggcaaagatgacgatgacgatggtgatgtggagatggag
aaatttgaaatcacggactgggacctgcagaacgagttcaaccccaaccggcagcgccac
tggcagaccaaggaggaggccacctatggcgtgtgggctgagcatgactccgacgacgag
aggcccagctttggaggcaaacgctctcgggactactcggccccggttaatttcatcagt
gccggcctaaggaaagctgcagctgaggaagtgatagaagaagattcagatgaggatgaa
aagcccgttaagcaggaagaattccctaaagagtttgtaccaaagaagttaaaaacaggt
ggcaatttcaaacccagccagaaaggatttataggagggaccaaatctttcatggacttt
ggcagctgggagagacacaccaagggaatagggcagaagcttcttcagaaaatgggttat
gtccctggtagagggcttggaaagaacgctcaaggtatcatcaatccgattgaggccaag
cagaggaaaggcaaaggggccttgggagcatatggctccgaacgaaccagtcagtccttg
caggacttccctgttgttgactccgaggaagaagctgaagaggaatttcagaaagagctc
agtcagtggaggaaggatcctaatggaggcaagaaaaaacccaaatatgcctacaagaca
gtagaagaattgaaggccaagggcaggattggcaagcagctcacagctcctcaaaaagaa
ctatcccaagttaaggttatagacatgactggccgggaacaaagggtttattacagttat
agtcaaatcagccataagcacaacatcccagatgacaatcctcagcagccgctgggcaaa
gactccaagccccaagcatttgccttgccagaactggagcacaacctgcaacttctcatc
gacatcacagagcaggagatcatccagaacgaccggcagctgcagtacgagagggacatg
gttgtcaacctgacccatgagatacagaagatgtctgaagtcctctcgcatgaggagaca
gcaattagcaacctcagtaaggtcctggaattggtggaggaatgcgagcggcgaatgcag
cccaactgtgacaatccacttaccttggatgaatgtgcaaagatttttgagaccctccaa
gataagtattatgaggaatacagaatgtccgatcgagtggacctggcagtagctatcgtc
tttcctctcatgaaagattacttcaagaactgggatcccctcaaggattgtatgtatggc
acagaaattatagccaagtggaaaaggcttttagaaaatgatcagttgttatcgcacagt
ggacaggacctagcaacggatgcttttcacaggctcatgtgggaaatgtggatgccgtat
gtaagaaatataataacacagtggcagccgagaaactgtggcccaatggtagatttcttg
gacagctgggtacatgttattcctgtttggatattggataatattctggatcagctcatc
ttccccaagctacagaaggaggttgaaaactggaaccctctgacagacactgtcccaatc
cactcttggattcacccctggcttccactgatgcagtctcgattagagccattatattct
ccaatccgaaacaagttggcaaatgcactgcagaaatggcaccccagtgactcctcagcc
aaactgatccttcagccctggaaagaagtgtttacaccaggatcttgggaggctttcatg
gtcaaaaacattgtgcctaaactagggatgtgtctcaatgagctcgtcattaaccctcac
cagcagcatatggatgcattttactgggtgatcgactgggaggggatggtctctgtgtcc
agccttgttggacttctggagaaacacttcttccccaaatggctgcaggtactctgctcc
tggctaagtaatagccccaattacgaagagatcaccaagtggtaccttggttggaagtct
atgttctcagaccaggtgttagcacatccatcgatcaaggacaaatttaatgaagctctt
gatatcatgaaccgggctgtctcttccaatgtcggtggctacatgcaaccaggtgctcgg
gaaaacattgcctatctcactcacacagagcggaggaaagacttccagtatgaagctatg
caggagcggcgagaggctgagaacatggcccaacggggcataggcatggctgctagctct
gtgccaatgaattttaaggacctcattcaaacaaaagcagaagaacacaatatcgtcttc
atgcctgtgatcgggaagcggcatgaaggaaaacaattgtacacatttggacgaattgta
atttacattgacaggggcgttgtgtttgtacaaggagaaaagacatgggtgccaacctct
cttcagagtctcattgatatggctaaataa
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