Caretta caretta (Loggerhead turtle): 125623299
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Entry
125623299 CDS
T09292
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125623299 (SNAPC4)
03021 Transcription machinery [BR:
ccay03021
]
125623299 (SNAPC4)
Transcription factors [BR:
ccay03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
125623299 (SNAPC4)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
125623299 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
SLIDE
Myb_DNA-binding_2
Motif
Other DBs
NCBI-GeneID:
125623299
NCBI-ProteinID:
XP_048678341
LinkDB
All DBs
Position
16:complement(6739474..6772034)
Genome browser
AA seq
1592 aa
AA seq
DB search
MAHYLGPAGDLLQEREVMSPVDLHAEREKIRREIEELEKSLDPAIPSIEVLVSDSSLDSD
SDVDDLDDDDSDAHTEMEVEKEGGSSDDDDIDNNLPADPETCLQMNLVYQEVIQEKIEEV
NLLIAQNKEQQKEIMCEVGGPKMAKAGDGKLLPLNMFLGHFMKPYFKDKVSGIGPPANED
TREKTAQGIKSFEELLIKKWKSREKSLLNRSVISDRLQRLLQPKLLKLSYLNQKLEKAKN
EMEKKIFEKQVKEAEREIEEINHLPEEALLGNRLDEHDWEKISNINFDGSRNAEELRKFW
QNWEHPTINKREWNEEEIEKLKEIAAKHNCLDWQTIAQELGTNRSAFQCLQKFQAYNKDF
KRKEWTKEEDQMLLQLVQEMRVGSHIPYKKIAYYMEGRDSMQLIYRWTKSVDPNLRKGFW
TPEEDAKLLAAVAKYGERDWYKIRTEVPGRSDAQCRDRYLNALHHDVKKGRWSLDEEEKL
IELVEKHGVGHWTKIASELPHRTGSQCLSKWKAMIGAKKKSGPRKRLQKRRRVRRHSSSS
SESSSEDSEPELMDSSEGEIDSPSGFRGTVPGLDLWIPTRTDPAKCWKAKHLIPSLYCSK
SALVKGQLKRIPATSFGGGRDRVPTDSAGISTILKGIGCPPSTDINLKDPEELVKEAFIR
GKQVLKVTLEDVRRVLRNNTYSQRKCEDGLRKPCVPSSAVVSGVTPGTSVGQVLQGLQNT
MEKQYRRQREQFQRKKLERRLLMAVTPWVGNVLLPCAFRAERVASRQTKALVIQEQLQTV
TLGSTPVFALFIQLFQIDTSGCMKVIRERKMRQSDLIKAMAGNARRLQQPSCSSKNSSGL
PAQSRSQKAAGKGRARRPIALKAKENPAAVSAGVPALPTPRQKPKTVSELLREKRLRESR
AKKALQRTVILAPQVLVSPSVIIQHPVQQVIPAPQRGSEPPTAGLAGSRNAQAACAPVPL
PAFTPVVAPVPSPKPVGSHSSPVPDSAESACSSERRAKSKRELNEAALGDVSKGEASQDR
PMGAGENGLSQGSKKAQAFGGSSAPVVLQNHAFVPHQIALMPSSAISLNPAAMKSGPKET
SPSTSTTCAPALVRSQQNAINLLPAILAPQRGSHVVPKNIMPITWVVTPQGLIPTSVQAL
VSVHSQGKQPAAGIIGSAARNQSRTGETSAPRVPLMPAEASHPSIRCTGAQVLSPQLAEG
APSGKTVCLNPSTRPSSITSLDPGHSSPSVTPPAPASLNSLSRISNSSGERSATPMSLPD
EGAALHPSPVLLPQVKPPASTPWADQLCLPSLPGTGESNNCNMLTGVASNPKVLLEGSLV
QRPDRLLACNNIVENSDSPGAQVTKNRPIFPKPQSTPNVDNPPGLPTPNAEKNLLDVSLL
SLEDEALVKEWLRGKRGIPVAPLETSLAYFPPFLCNLKTLSRLLLQKKTLEQRVSCLRTS
EERRDGDAGADLPAVRQLVWQKLGDNPAYLLLKARFLAAFTLPAVLATLPPPTVTTTLSS
SWQQSSESDEEESPTDKELMEAESCGKEPAKVPLDSTAGIVPGSEDADITHQSAGAEVSA
VQSVSGSCADVGEARVLRTRRSARFRKRRRQT
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atggcccattacctggggccggctggggacctcctgcaggagcgcgaagtcatgtcgcct
gtggatttacacgcggaaagagagaaaatccggcgggaaatagaggagctagaaaagagc
ttggaccctgctatccccagtatcgaagtcctggtgtcggattccagtctggactcggat
tccgacgtagatgatctggatgatgatgactcagatgcccatactgaaatggaagtagag
aaagaagggggcagtagtgatgacgacgacattgataacaacctcccagcagacccagaa
acatgtttacagatgaacctcgtgtatcaagaagttattcaggaaaagatagaggaagtc
aaccttctgatcgcacaaaacaaagaacagcagaaagaaattatgtgtgaggttggtggt
ccaaagatggcaaaggcaggagatggtaaacttctaccactgaatatgttcttaggccat
tttatgaagccgtacttcaaggataaagtatcaggaattggccctcctgccaatgaagat
acccgagaaaagacagcgcaaggcataaaatcctttgaggagctgcttataaaaaagtgg
aaaagcagagagaagagcctgctgaacagatcagtaataagtgaccgtttgcagcgtctg
cttcagccaaagttactgaagctcagctatttgaatcagaaactggaaaaagccaagaat
gaaatggaaaagaagattttcgaaaaacaagtcaaagaagcagagcgtgaaatagaggag
atcaaccatctgccagaggaggccttattaggaaacagactggatgagcacgactgggag
aagatttccaacatcaattttgatggaagtcgcaacgcagaagagctgaggaaattctgg
cagaactgggagcatccgaccatcaacaagagggagtggaatgaagaggagatagagaag
ttaaaggaaatagctgcgaaacataattgtctggactggcaaactatagcccaggagctt
gggacaaaccgaagtgcattccagtgcctgcagaagtttcaagcctacaataaagacttc
aagaggaaagaatggacaaaagaagaggaccagatgcttctacagctcgttcaagaaatg
agagtaggaagccacataccttacaagaaaattgcttattacatggaaggaagagactct
atgcagctaatttaccgctggacaaagagtgtggatcccaacctaaggaaaggattctgg
acaccagaggaagatgctaagttgttggcagcagttgctaagtatggagagcgtgactgg
tataaaattcggacagaggtaccaggaaggagtgatgctcaatgcagagacaggtattta
aatgcattacaccacgacgtaaagaaaggcaggtggagtttagacgaagaagaaaagtta
attgaactggtagagaaacatggtgtgggtcactggaccaaaatagcttctgaattacca
cacagaactggctcccagtgtctaagcaaatggaaagccatgattggggctaagaaaaag
tctgggccgaggaaacgccttcagaaacgcaggcgagtgcggagacacagttccagctct
tcagagagcagcagcgaggattcagagccagagctaatggatagctctgagggcgaaata
gactctccctcaggattcaggggtactgtgcccggcctcgacctgtggatcccgacgagg
acagatccggccaagtgctggaaagccaaacacttgattccctccctctactgttccaaa
agtgctcttgtaaagggacagttaaaacgaattccagctacatcttttgggggaggcagg
gacagagtcccaactgattcagcagggataagtaccatactgaaaggtattgggtgtcca
ccttctactgacatcaatttgaaggatccagaagaactggtaaaggaggcattcataaga
ggaaagcaagtgttaaaggttaccctggaagatgtgaggagagtgctaagaaataatacc
tattctcagaggaaatgcgaagatgggctacggaagccttgtgtcccctcttcagcagtg
gtttctggagtgacaccaggcacatcagtcggccaggtgctgcagggattacagaacaca
atggagaaacagtaccgtcgccagagagagcaattccaaagaaagaagctggagaggagg
ctcctgatggcagtgactccgtgggtgggcaatgtcctactgccttgtgcctttagagcc
gagagggtggcgtcccgtcaaacaaaagctcttgttattcaagaacagcttcagacagtc
acgctgggcagcactccggtgttcgcactcttcattcagctcttccagattgacactagt
ggctgcatgaaggttattcgtgagaggaagatgaggcagtcggacctcatcaaggccatg
gctgggaatgcaaggagacttcagcagccctcctgcagttccaagaactcttcaggcttg
ccagcacagtcccgctcccagaaggccgcaggaaagggaagagccaggagacccatcgcc
ttaaaagcaaaggagaaccctgcagctgtttcggcgggtgtccctgctcttcccactccc
aggcaaaagcctaaaacagtctcagaattactgagggagaaaaggctgcgggagtccagg
gctaagaaagctttgcagagaacagtgattcttgccccccaggtgttggtttcgccctct
gtgataatccagcaccctgtgcagcaggtaattcctgccccacaaagaggaagtgagcct
ccgacagctgggctggcaggtagcaggaatgctcaggcagcgtgtgcaccagtgccccta
cctgcatttactcctgttgtggctcctgtcccctctcccaaacctgtcggaagccattca
tctccagtcccagactctgcagagagcgcttgctcctccgagaggagagcaaaatccaag
agagagctcaatgaggcagctttgggagatgtgtccaaaggcgaggcttctcaggacaga
cctatgggtgcaggggagaatggcctgtcccaggggtccaagaaagctcaagcatttggt
ggcagctcagcacctgtagtcttgcaaaatcatgcctttgtgccgcatcagattgcattg
atgccgtcttcagccatttctctgaaccctgccgccatgaagtcaggccccaaggagacc
tctccctccacatccacgacttgtgccccagccctggtcagatcacagcagaacgctatc
aatctgttgcctgctatcctagctccccagagggggtctcacgtggttcccaagaacatc
atgcccatcacctgggtggtaacaccacagggtttgatccccacctctgtacaagcattg
gtgagtgttcacagccaagggaagcagcccgcagctgggatcataggcagtgctgccaga
aatcagagtcggactggagagacctctgccccaagagtgccgctgatgccagccgaagca
agtcacccttccatcaggtgcacaggtgcacaagtgctgagcccacagttagcggaaggg
gcaccctcagggaagactgtttgcttaaacccttccactcgtccctcatccataacctcc
ttggatcctgggcacagctcacccagcgtgactcctccagctcctgcctctttaaacagc
ctctcgaggatatccaactcctctggagagaggagtgcaactccaatgagccttccagat
gaaggagcagctctgcaccctagccctgtgttgttgccccaagtgaagccgcctgcaagc
actccgtgggctgaccagctctgcttgccaagtctccctggcacaggtgagagcaataac
tgcaatatgctcaccggggttgcctccaatccaaaagtcctgctggaagggagcctggtg
caaaggccggatcggcttctggcctgtaacaacatagtagagaactcggactctcctggt
gcacaggtaacaaagaacaggccaatcttcccaaagccacagagcaccccaaacgtggac
aacccccctggattgcccacacccaatgccgaaaagaacctcctggacgtcagccttctc
tcccttgaggatgaggctttggtgaaggagtggctgagagggaagcggggcatcccggtg
gccccattggaaaccagcttggcttactttccacctttcttgtgcaacttgaaaacgctc
tccaggctgcttctgcagaagaagacgctggagcagcgtgtgtcatgcctcaggacctct
gaggagcgcagggatggggatgcaggggctgatctgcctgctgtccgacagctggtgtgg
cagaaacttggcgataaccctgcctatctcctgttaaaagccaggtttttagcagcattt
actctcccagctgtcctagcaactctgcctcctcccacagtgactacgactctctccagt
agctggcagcagagttcagagagtgacgaagaggagtcccctactgataaggaactgatg
gaggcagaaagctgtgggaaagaaccagccaaagtacctttggatagcacagctggcatt
gtccccgggagtgaggatgctgacatcacccatcagagtgctggagctgaagtgtccgct
gtgcagtccgtctcaggctcctgcgctgacgtgggtgaggccagagttctgcgaaccagg
agaagtgctcgcttcaggaagaggaggaggcagacgtga
DBGET
integrated database retrieval system
