Caretta caretta (Loggerhead turtle): 125623310
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Entry
125623310 CDS
T09292
Symbol
ABCA2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay02010
ABC transporters
ccay04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125623310 (ABCA2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125623310 (ABCA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccay02000
]
125623310 (ABCA2)
Transporters [BR:
ccay02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125623310 (ABCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
Motif
Other DBs
NCBI-GeneID:
125623310
NCBI-ProteinID:
XP_048678371
LinkDB
All DBs
Position
16:complement(20598094..20737819)
Genome browser
AA seq
2507 aa
AA seq
DB search
MGFLHQLHLLLWKNVTLKRRSPWVLAFEIFIPLVLFFILLGLRQKKPTIPVKEAFYTAAP
LTSAGILPVMQSLCPDGQRDEFGFLQYSNSTVTQLLERLNEVVEESNLFDPQHPGLEEEL
ESLRRQLESLSNSEPSSMETHFDSRAASRFTLGSAVKDQSELHRFLTRNLSLPNETAQLL
LGSNINLKEVYRLFFGSAPASADDAHEREPWDRFSAGEKILQLEESLLGGWRNLEDGLIH
RALRDPKRSTHRQALLHLLSQALGLAGAPSEASASYSPQAFVKEMESILFTPSVLEHLTC
DQDQEELKQILTVPESRQTWLQAYRATVCNGSTSIRREHFTQLGMELKEQLDVHKVVSRL
KLDEVNSTAAQHRLHALLEDLVEMEKVLKDVDILSALAKLLPQGACTSKAPPPATNSTSW
GGNFTAGANSTTEEGDREPVGENPQGQCSAFVQLWAGLQPILCGNNRTIEPEALKQGNMS
SLGFTSKEQRNLGLLVHLMTSNPKILYSPVGTEVDKVILKANETFAFVGNVTRYAQVWLN
ISSEIRGFLEEGKLQRRIRWLQEFTNDLHKHPEILNASDNNLLRSFIDSNFSLPNASALL
QQLDTIDNAACGWIQFMAKVSVDIFKGFPDEESIVNYTLNQAYQDNVTVFASVIFQTNKD
GSLPPHVMYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGFVWIQDMMERAIINTF
VGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMMIQHIVAEKEHRL
KEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGKVLMHSDVFIIWLFLAIYAV
ATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIASLMS
TTAFGLGSKYFALYEVAGVGIQWHTFSQSPVEGDDFNLLLSMMMLIVDAVVYGVLTWYIE
AVHPGMYGLPRPWYFPFQKSYWLGNGRVETWEWTWPWSRTTRLSIMEEDQACAMENRRLE
ETRGIEEEPNHLPLVVCVDKLTKVYKTDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTM
SILTGLFPPTSGSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDKLTVEEHLWFYSQLKSM
AEEEIRKEMDKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAGVD
PYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKSTYGD
GYKLTVVKKQSDSRNGTDSGQTHSPLSHSSASPCSEPRVTQFIKKYVASCLLISNTNTEL
SYILPSEAVKKGCFERLFQHLEQSLGELELTSFGLMDTTLEEVFLKVSEEDLSLENSDVD
MKESKKDALQHPAPHMDLKPEANGGPLPDVEAPEKPEVELSNLVVCSNLTQSQASLLSAS
SVGSVRGDEGGAYSEFYGDYSPLFDNLQDPDNVSLQDQEADAEAADPPLVGQGSFKLEGS
WLKLRQFHGLIVKRFHCAKRNTKALFSQILLPAFFVCVAMTVALSVPEIGDLPPLILSPS
QYHNYTQPKGNFIPYANEERREYHMKLSPDASPQQLVNTFHLPSGVGATCVLKTAFNSTL
DQLVQTLNLNSNESKMLAAKYFDAMCVDSFTQGLPLSNFVPPPPSPAPSDYPVSMDDDMV
HAWNSTTYPSTVKETVTLAPSLPRLIHEPIKCTCSMQGTGFSCPSGVGGHPPQMKVVTGD
ILVDITGRNISEYMLYTSDRFRLHRYGAITVGNVQKSIPASFGAQAPPMVRKIAVRRTAQ
VFYNNKGYHSMPTYLNALNNAILRANLPKSRGNPAAYGITVTNHPMNKTSASLSLDYLLQ
GTDVVIAIFIIVAMSFVPASFVVFLVAEKATKAKHLQFVSGCDPVIYWLANYVWDMLNYL
VPATCCIIILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSSAYVFLI
VINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINE
YYAKIGQFDKMKSPFEWDIVTRGLVAMTIEGFVGFFITIMCQYNFLRKPQRLTVSNKPIE
DDIDVANERHRVLRGDADNDMLKIENLTKVYKSRKIGRILAVDRLCVGVRPGECFGLLGV
NGAGKTTTFKMLTGDESTTGGEAFINGHSILKELLQVQQSLGYCPQFDALFDELTTQEHL
ELYTRLRGIPWKDEERVVKWAMKKLELTKYADKPASTYSGGNKRKLSTAIALIGFPAFIF
LDEPTTGMDPKARRFLWNLILDIIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLKCLGS
IQHLKNRFGDGYMITVRTKSSLSVKEVVRFFNRNFPEAILKERHHTKVQYQLKSEQISLA
QVFSKMEQVVDVLGIEDYSVSQTTLDNVFVNFAKKQSDNLEQQETSPNCSIQSPLEHILS
LLRPRAAPTELRALVVEEPEDLETDDEGLISFEEERAQLSFNTDTLC
NT seq
7524 nt
NT seq
+upstream
nt +downstream
nt
atggggtttctgcaccagctgcatctcctgctctggaagaacgtgactctcaagcgcagg
agcccgtgggtgctggcctttgagatcttcatccccttggtcctcttcttcatcctcctg
gggctgcggcagaagaagcccaccatccccgtgaaggaagctttctacacagcagcccct
ctcacctcggctgggatcctgccggtgatgcagtccttatgccccgatggccagagagat
gagtttggattcctgcagtattccaattccaccgtgacccagctcctggagcggctcaat
gaggtggtggaagagagcaacctgtttgacccgcagcaccctgggctggaggaggagctg
gagtccctgcggcggcagctggagtccctcagcaacagcgagcccagctccatggagacc
cacttcgacagccgggcagcgtctcgcttcacactgggctccgcagtgaaggaccagagt
gaacttcatcgcttcctcactcggaacctctccctgcccaacgagacggcccagctgctg
ctaggctccaacatcaacctcaaagaggtatatcgcctgtttttcggctctgcgcccgcc
tcggcagacgatgcccacgagagagagccctgggaccggttcagtgctggggaaaagatt
ctccagctggaggagagcctcctgggcgggtggagaaacttggaagacgggctgatccac
agggccctgcgcgaccccaagagatccacccacaggcaggccctgctgcacctcctgtcc
caggccctgggtctggccggcgccccctctgaggcctctgcttcctacagcccccaggcc
tttgtgaaggagatggagagcatcctcttcacgccatcggtgctggagcacctgacctgt
gaccaggatcaggaggaactgaagcagatcctgactgtccctgagagccggcagacctgg
ctgcaggcctaccgggccaccgtctgcaacgggagcaccagcatccgccgggagcacttc
acacagctgggtatggagctcaaggagcagctggacgtgcacaaagtcgtcagcaggctc
aagctggatgaggtgaacagcacagcggcccagcaccggcttcacgccctcctggaggac
ctggtggagatggagaaggttctgaaggacgtggacatcctctcggctctggccaagctg
ctgccccagggcgcctgtaccagcaaagcacccccacccgccaccaacagcaccagctgg
ggcggcaacttcaccgccggcgccaactccaccacggaggagggcgacagggagcccgtg
ggagagaacccccagggccagtgctcagccttcgtgcagctctgggcaggactgcagccc
atcctgtgcgggaacaaccgcaccatcgagcctgaggccctgaagcagggcaacatgagc
tccttgggcttcaccagcaaggagcagcgtaacctggggctgctggtgcacctcatgacc
agcaatcccaagatcctttactcgcccgtcgggacggaggtggacaaggtcatcctgaag
gccaatgagacctttgcctttgtcgggaacgtgactcgctacgcccaggtctggctgaac
atctcctccgagatacggggcttcctggaggagggcaaactgcagcgacgaatccgctgg
cttcaggagttcaccaatgacctccacaagcaccccgagatcctgaacgcctcggacaac
aacctcctccgcagcttcatcgacagcaacttctcgctgcccaatgccagcgctctgctg
cagcagctggacaccatcgacaatgccgcctgtggctggatccagttcatggccaaggtc
agcgtggacatcttcaagggcttccctgacgaggagagcattgtgaactacacgctgaac
caggcgtaccaggacaacgtcacggtgtttgcaagtgtgatcttccagaccaacaaggat
ggctccctgccccctcacgtgatgtacaagatccggcagaattccagtttcaccgagaag
accaacgagatcaggcgggcatactggcgcccgggccccaacacgggcgggcgcttctac
ttcctttacgggttcgtgtggatccaggacatgatggagcgagccataatcaacaccttc
gtgggccacgatgtggtggagcccggcaactatgtgcagatgttcccgtacccgtgttac
accagggacgatttcctgttcgtcatcgagcatatgatgcccttgtgcatggtgatctcc
tgggtctattcggtggcgatgatgatccaacacattgtggcggagaaggagcatcggctg
aaagaggtgatgaagatgatgggcctgaataacgcagtccactgggtggcctggttcatc
accggctttgtccagctctccatctccgtcaccgcactcactgccatcctgaagtatggc
aaggtcctgatgcacagtgacgtcttcatcatctggctcttcctcgccatctacgccgtg
gccaccatcatgttctgtttcctggtgtccgtgctctattccaaggccaagctggcctca
gcctgcgggggcatcatctacttcctgagctacgtcccctatatgtacgtcgccatccgg
gaggaagtggcccacgacaagatcacggccttcgagaagtgcattgcttctctcatgtcg
accacggccttcgggctgggctccaaatactttgcgctgtacgaggtggccggcgtgggc
atccagtggcacaccttcagccagtcacccgtggaaggcgacgacttcaacctgctgctc
tccatgatgatgctgatcgtggatgccgtggtctacggtgtgctgacgtggtacattgag
gccgtgcacccaggcatgtacgggctcccccggccctggtacttccccttccagaagtcc
tactggctcgggaacgggcgggtcgaaacctgggagtggacctggccctggtctagaacc
acccgcctcagcatcatggaggaggatcaggcctgcgccatggagaacaggcggctggag
gagacgcgtggcatagaggaggagccgaaccacctgccgctcgtcgtgtgcgtggacaag
ctcaccaaggtctacaagactgacaagaagctggcactgaacaagctgagcctgaacctc
tatgagaaccaagtggtgtccttcctggggcacaacggggcgggcaagaccaccaccatg
tctatcctgactggcctcttccccccaacctcgggctctgctaccatctatggccatgac
atccgtacagagatggacgagatccggaagaacctgggcatgtgtccccaacataacgtg
ctctttgataaactgacggtggaggagcacctctggttctactcgcagcttaagagcatg
gcggaggaggagatccgcaaggagatggacaagatgatcgaagacctggaactgtccaac
aagcggcactccctggtgcagactctgtcaggagggatgaagaggaagctgtcggtggcc
atcgcctttgtgggtggatcgcgggctgttatcttggatgagcccactgctggtgttgac
ccatacgcacgtagggctatttgggatctgatcctcaaatacaaacccggaaggaccatc
ctgctctccacacatcacatggatgaggccgacctgctcggggaccgcatcgccatcatc
tcccatggcaagctcaagtgctgcggctccccgctcttcctcaagagcacctacggggat
ggctacaagctgacggtggtgaagaagcagtcagactccaggaatggcacagactcaggg
cagacacacagccctctctcccactcctccgccagcccctgctctgagccccgcgtcacc
cagttcattaagaagtacgtggcctcctgcctgctgatctccaacaccaacacggagctc
tcctacatcctgcccagcgaggctgtcaagaagggctgcttcgagaggctcttccagcac
ctggagcagagcctgggggagctggagctgaccagctttgggctgatggacactaccctg
gaggaggtcttcctcaaggtgtcggaggaggacctgtccctggagaacagcgacgttgac
atgaaggagtccaagaaagatgccctgcagcacccggctccccacatggacctgaagccc
gaggccaacggggggccccttcctgacgtggaggcacccgagaagccagaggtggagctc
agcaacctggtggtctgctccaacctgacccagtcgcaggcgtccctgctctcggcttcc
tcggtgggctccgtgcggggcgatgaaggtggggcttattcggagttctatggggattac
tctccgttgtttgataatctgcaggaccctgataacgtcagtctgcaagaccaagaggct
gacgctgaggctgcggacccgcccctggtgggacaggggagctttaagctggagggctcc
tggctcaagctgcgccagttccacgggctgatcgtcaaacgcttccactgcgccaagcgc
aacaccaaggccctcttctcgcagatcctgctgcccgccttcttcgtctgcgtggccatg
acggtggcgctctctgtgcccgaaataggtgacctgcctcctctgatcctctcgccgtcc
cagtatcacaactacacccagcccaagggcaacttcatcccctatgccaacgaggagcgg
cgcgaataccacatgaagctgtcgcccgatgccagcccgcagcagcttgtcaacaccttc
cacctgccctccggggtgggggccacgtgtgtgctgaagacggccttcaatagcaccctg
gatcagctggtgcagaccctgaacctcaacagcaacgagtccaagatgctggcggccaag
tacttcgacgccatgtgcgtcgattccttcacccagggtctgccgctctccaacttcgtg
ccaccgcccccatcccctgccccctctgactatcccgtctccatggatgacgacatggtg
catgcctggaactccaccacgtacccctccaccgtcaaagagaccgtcactttggccccg
tccctgccccgcctcatccatgagcccatcaaatgcacctgctccatgcaggggacgggc
ttctcctgccccagcggcgtgggaggccacccgccccagatgaaggtggtgacaggggac
atcctggtggacatcacagggcgcaacatctctgagtacatgctgtacacgtcggaccgc
ttccggctgcacaggtatggagcgatcacggttggcaatgttcagaaatccatcccagcg
tcctttggcgcccaggcccctcctatggtgcggaagatcgcggtcaggagaacagcccag
gtcttctacaacaacaagggttaccacagtatgcccacctatctgaacgcgctgaacaac
gccatcctgcgtgccaacctgcccaagagcagagggaaccccgccgcctacggcatcaca
gtgaccaaccatccgatgaacaagacgagtgccagcctctccctggattacctcctgcaa
ggcacggatgtggtcatcgccatcttcatcatcgtggccatgtccttcgtgccggccagc
ttcgtggtgttcctggtggccgagaaggccaccaaagccaagcacctgcagtttgtcagc
ggctgcgacccagtgatctactggttggccaactacgtgtgggacatgctgaattacctg
gtgccggccacatgctgcatcatcatcctctttgtgttcgacctcccggcgtatacgtcc
cccaccaacttcccagccgtcctctcactcttcctgctctatggctggtccatcaccccc
atcatgtacccagcctccttctggtttgaggttcccagttcagcatacgtcttcctgatc
gttatcaacctcttcattggcatcacggccactgtcgctacctttctgctgcagctcttc
gagcacgacaaggacctgaaggtcgttaacagctacctgaagagctgcttcctcatcttc
cccaactacaacctgggccacgggctgatggaaatggcctacaatgaatacatcaacgaa
tactacgccaagatcgggcagtttgataaaatgaaatcgccctttgagtgggacattgtg
acccggggcctggtcgccatgacgattgaaggattcgtaggtttcttcatcaccatcatg
tgccaatataacttcctccggaagccacagcggctgactgtctccaacaagcccatcgag
gatgacatcgacgtggccaacgaacggcaccgggtcctgcgcggcgatgccgacaacgac
atgctcaagattgagaatctcaccaaggtgtacaaatcccgcaagattgggcgcatcctg
gccgtggaccgtctgtgcgtgggcgtgcggcccggggagtgctttgggctgctgggcgtc
aatggggcagggaagaccaccaccttcaagatgctgactggggatgagagcaccaccgga
ggggaagccttcatcaacgggcacagcatcctgaaggagctcctccaggtgcagcagagc
ttgggctactgtccgcagttcgatgccctgttcgacgagctcacgacacaggagcacctg
gagctctacacccggctacgtggcatcccctggaaggacgaggagagggtggtgaagtgg
gcgatgaagaagctggagctcaccaaatacgccgacaagccggccagcacctacagcggg
ggcaacaagaggaagctgtccacagccattgccctgattggcttccctgccttcatcttc
ctggacgagcccacgacgggcatggaccccaaagcccggcgcttcctgtggaacctcatc
ctggacatcatcaaaacgggccgctccgtggtgctgacgtcccacagcatggaggagtgc
gaggcgctctgcacccggctggccatcatggtgaacgggcggctcaagtgtctcggcagc
atccagcacctgaaaaacaggtttggagatggctacatgatcacagtgcgtaccaagtcc
agcctcagcgtcaaggaggtggtgcggttcttcaacaggaacttccccgaggccatcctc
aaggagcgacaccacaccaaggtgcagtaccagctcaagtctgagcagatctcgctggcc
caggtcttcagcaagatggagcaggtggtggacgtgctgggcatcgaggattactccgtc
agccagaccacacttgataatgtgtttgtgaattttgccaagaaacaaagtgacaacctg
gagcagcaggagaccagccccaactgctcgatccagtcaccgctggagcacatcctgagc
ctgctgcggccccgcgccgcccccaccgagctgcgggccctggtggtggaggagcccgag
gacctggagacagatgacgagggcttgatcagctttgaggaggagagggctcagctctcc
ttcaacacggacactctctgctga
DBGET
integrated database retrieval system
