Caretta caretta (Loggerhead turtle): 125623336 Help Entry 125623336         CDS       T09292                                  Symbol NUP188 Name (RefSeq) nucleoporin NUP188 isoform X1   KO K14311   nuclear pore complex protein Nup188 Organism ccay  Caretta caretta (Loggerhead turtle) Pathway ccay03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:ccay00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     125623336 (NUP188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccay03019]     125623336 (NUP188) Messenger RNA biogenesis [BR:ccay03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      125623336 (NUP188) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup188_SH3-like Motif Other DBs NCBI-GeneID:  125623336 NCBI-ProteinID:  XP_048678428 LinkDB All DBs Position 16:complement(12961088..13007599) Genome browser AA seq 1756 aa AA seqDB search MAAGGLCARSSRELWTILLGRSALREPAQIAAELNKHWQRLLEGLLYYKPPSAISAEKVK ADKDVAAPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQALM LKLADYYYEERMCILRCVLNLLTYFQDERHPYMAQYSQCVEKLDKELVPNYRKQFEDLYK AEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEVIFLYYAYFEMAPDELLAFARLFKEQ GFGSRQTNRHLVDESMDHLVDRIGYFSALILVEGMEIDSLHERVLDDRTEEHKFASNGHM HQEMDHLLLTLGDISHHAPVLLAWALLRHTVTPEESTSVIRRMGSTAIQLNIFQYLTKLL RSLSSGGKNCTASTACMCIYGLLSFVLTSLELHTLGNQQDIIDSACEVLAASSIPQLFWR TEPTAGLGIILDSVCGMFPHLLSPLLQLLKALVSDKSTAKKVYSFLDKMSFYIELYKHKP PDVISHEDGTLWRRQVPKLLYPLGLGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWTL FTCEIEMLLHVVSTADVIQHCQRVKPVIDLVHKVISTDVSIADCLLPITSRIYMLLQRLT SVISPPVDVIASCVNCLTVLAARMPAKVWTDLHHTGFLPFVANPVSIMSHMISAEGMNAG GYGNLLMSVEQPQGEYGVTISFLHLVTTLVRGQLGSTQSQGLMPCIVFVLKEMLPNYHKW RYHSHGVRERIGCLILQLIHAILNLCPEMDPHSGSAPSLQSLCIFSLANTEAGQAVINIM GIGVDTIDMVMASQSCSYTHSLENFKGIARIADLWNDESLGQGQLLIQTVKLAFSVTNNV IRLKSPSSVVSPLEQALTQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPM SVYACLGSDAAAIRDAFLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDG SDGSKEFSLGEWSCLQVVLELIDSKQQERYWCPPLLHRAAIAFLHALWQDRRDSAMLVLR TKPKFWENLTNPLFGTLSPPLETSELSVLDTCALIMKIICLEIYYVVKGSLDQSLKDTLK KFSTEKRFAYWSGYVKSLALHMAETEGSSCTSLTEYQMLISAWRMLLIISTSHADIMHLT ESAVRQQLFLEVLSGTKALLLVPMSVLCLQLGSMLCTLLLILLRQWKSELGSVDKIINSL TQILEGVLQADQQVMEKTKAKVFSALITVLQMKEMKVSEIPQYSQLVMSVCETLQDEVIV LFDQTRHSLTSGDSVDDKDSMETDDACRGKHKDQRDGVCVLGLHLAKELCEVDEDGDYWL QVTRKVPMLPTIFTALEISLRVKQNLHFTEASLHLLLTLARTQQGAAAVASAGVTQSICL SLLSAYQLSTNGTIQTPASSRKSLDAPSWPGVYRLSISLMERLLKTLRYNFLTEALDFVG VHQERILQCLNAVRTVQSLACLEEADHTVGFILQLSNFMKEWHFHLPQLLRDIQVNLCYL CQACTSLLHSRKMLQHYLQTKNGDSLPSAVTPRVQRTPQTSSKHPSPESEAAEQKALRTV QYSLLKILSKSLAALRHFTPDVCQILLDQSLDLAEYNLLFVLSFTTPAFDSDVAPSFGTL LATVNVALNMLGELDKKKEPFTQAAGLNTQEETKTLKTLLMFTMENCFYLLISQAVRYLR DPAVHPRDKQRMKQELSSELSTLLSSLSRYFRRGGPSSPASGVLPSPQGKSASKLGPEGQ EPLIQLVQAFVRHVQR NT seq 5271 nt NT seq  +upstreamnt  +downstreamnt atggcggctggcgggctgtgcgcgaggagcagcagagaactctggaccattctgctgggc agatcggctttgagggaacctgctcagattgcagcagaattgaacaaacattggcagagg ctgctagaggggcttttatactacaaacctcccagtgcaatttcagctgaaaaagtaaaa gctgataaagatgtggctgctccactgaaggaactgggcctgaggatcagcaagtttttg gggttggatgaagagcaaagtgtgcagctattgcagtgttatcttcaagaggattacaga gggacccgggattcacttaagactgtcctgcaggatgaaaggcagagtcaggctctgatg ctgaagcttgctgactattactatgaagaaagaatgtgcattctgcgctgtgtcctcaac ctactcacttattttcaggatgagaggcacccctacatggcacaatactcacagtgtgtt gagaagctggacaaggaactggttcctaattaccggaaacagtttgaagatctatacaaa gcagaagctcctacatgggaaacgcatggaaatctcatgacagagcgccaggtgtcccgc tggttcgtgcagtgcctccgcgagcaatccatgctcctagaagtcatcttcctttactat gcatactttgagatggcacccgatgagctgctggcctttgccaggcttttcaaagaacag ggatttggctctagacagaccaacaggcatttggtggatgaaagcatggatcacctggta gatcgtattggctacttcagtgctcttatcctggtggagggcatggaaattgactccctc catgagcgtgtgttggatgataggacagaggaacataaatttgccagtaatgggcatatg caccaggaaatggaccatctgctgctgactttaggggacatctctcatcatgcccctgtg ctcttggcctgggctttgctccgtcacacagtaaccccagaggagtcgaccagtgtgatc aggcgaatgggaagtactgctatccagctgaatatattccagtatctgacaaagctgctc cgatcactcagcagtggggggaagaattgtactgccagcacagcttgcatgtgtatttat gggctgctttcctttgttctgacctcgctggaattacatacgttaggcaatcagcaggac atcattgattcagcctgtgaagttctagcggcttccagcattccccagctcttctggagg actgagccaaccgcaggtctgggtattatcctggacagtgtgtgtgggatgttcccacat cttctttctcctcttctgcagctgctcaaagcccttgtatcggataaatctactgcaaaa aaggtgtacagtttcctggataaaatgtccttctacattgagttgtacaaacacaagcct cctgatgtgatctcacatgaagatggcaccctttggagaaggcaggtgccaaagcttctc tatcccctggggctgggccagacaaacctacgaatacctcagggaacagtgggtcaggtg atgctggatgaccgggcatacttagtacgatgggaatattcctacagcagctggacattg ttcacctgcgaaattgagatgctgctccatgttgtatcgacagcggatgtgattcagcac tgccagagggtcaagccagtcattgacctggttcacaaggtcatcagcactgatgtgtcg atagcagattgtcttctgccgatcacatcacggatctacatgctgttacagaggttaaca agtgtgatctctcccccagtggatgttattgcttcttgtgtcaattgtttgactgtattg gctgcccgcatgccagctaaggtttggactgaccttcaccacacggggttcttaccattt gttgccaatccagtttccattatgagtcacatgatcagtgcagagggaatgaatgctggg ggctatggaaacctgttgatgagcgtggaacagcctcagggcgagtatggtgtcaccatc tccttcctacacttggtcacaactcttgtccgtggacaacttggcagcacccagagccaa gggctaatgccctgcattgtgtttgtgctgaaggaaatgttaccaaactaccacaaatgg cgctatcactcccatggagtcagagaacgaattgggtgcctaatcctgcagctcatccat gctattctgaatctctgccctgaaatggatcctcacagcggcagtgctccaagcctgcag tccttatgcatcttcagcctggccaacacggaagcaggacaggctgtcattaacatcatg ggcatcggtgtggacaccattgatatggtcatggcctcgcagtcctgtagttatactcac tcattggagaatttcaagggaattgcacgcattgcagatttgtggaacgatgagtcactg ggccagggccagctgctgatccagacagtaaagctggcattctcggtcaccaataacgtc atccggttgaaatccccttctagcgtggtatccccactagaacaggcacttactcagcat ggtgctcatgggaacaatctgattgctgtcttagccaaatatatctaccacaaacacgac ccagcactgccacgccttgccatccagctgctcaaacgactcgctacggtggctccaatg tctgtttacgcctgcctggggagtgatgctgctgccattcgtgatgcctttttgacccgc ctgcagagtaagattgaggatatgcgcattaaagtcatgatcctggagttcctcactgtt gctgtagagacacagccggggctcattgagctcttcctgaacctggaagtgaaagatggg agtgatgggtcaaaggaattcagcttaggggaatggagttgcctccaagtggtcttggaa ctgatagactccaaacagcaggaaagatactggtgccctcccctcttgcaccgggccgcc attgcattccttcatgccctgtggcaggaccgtcgggatagtgccatgctggtcctgagg accaagccaaagttttgggaaaacttaaccaaccccctctttgggaccctttctcccccc ttagaaacatcagagctcagtgtcttggacacttgtgccttaatcatgaaaatcatctgc ctggagatctactatgtggtcaagggctcactggaccagtccctgaaagacactctgaag aagttctccacagaaaagcgctttgcttactggtcaggatatgtgaagtccttggcactg catatggcagagacagagggtagcagctgcacctccttgacagagtatcagatgctgatc tcggcctggcggatgctgctgattatctccaccagtcatgcagatataatgcatctgact gaatctgcagttcggcagcaactgtttctggaggtgttaagtgggaccaaagctttactg ctggtccccatgtcagtgttgtgcctacaactggggtccatgctgtgcacccttctgctg atcctgcttagacaatggaagagcgagttgggttctgtggataaaatcataaactccttg acgcagattctggagggagtgctgcaggcagatcagcaggtgatggagaagaccaaggcc aaggtgttctctgctctcatcactgttctgcagatgaaggagatgaaagtgagcgagatc cctcagtactcccagctggtgatgagcgtgtgtgagaccctccaagatgaagtaattgtg ctctttgatcagacacgacacagcctcacgtctggagactctgtagatgacaaggacagc atggaaacagatgatgcctgcaggggtaaacacaaggaccagcgagatggggtgtgtgtt ctagggctgcatctggcaaaggaactctgtgaagtagatgaagatggagattactggctg caggttactaggaaggtccctatgctgcctactatcttcactgccctagagatcagcctg agagttaaacaaaatcttcacttcacagaagcctcgttgcatctactgctgaccttagcc aggacgcaacagggtgcagcagctgtggctagtgctggtgtcacacagagcatctgtttg tccctcttgagcgcataccagctcagcacgaatggaacaattcagacacctgcttcatct cggaagtctcttgacgccccatcctggcctggggtctatcgtctctccatatcattgatg gagcgccttcttaagacactaaggtacaacttcctgacagaggcactggactttgtgggt gtccatcaggagaggattcttcagtgcctgaatgcagtacggacagtgcagagcctggcc tgtctggaagaagctgaccacactgttggcttcattcttcagctctccaactttatgaaa gagtggcatttccaccttccacagctcttgagggacatacaggtgaacttgtgttacctc tgccaggcttgtacctccctcctgcatagccgcaaaatgcttcagcactacctgcagaca aaaaatggcgactccctcccatcagctgtgacacctcgagtgcaacgcaccccccagacc tcctccaagcatccaagccctgagtcagaggcagccgagcagaaggcattgcgtacagtg cagtatagcctcttgaaaatcctcagcaaatctctagctgccctacgccacttcaccccc gatgtctgccagatcctccttgatcagtcactggacctggctgagtacaaccttctcttt gttctgagttttacaacacctgccttcgattcagatgttgctccctcctttgggaccctt ctggccactgtcaacgtggcccttaacatgctgggagagctggataagaagaaagagccc ttcactcaagctgcagggctgaatacacaagaggagactaaaactcttaagactttgctc atgtttacaatggaaaactgtttctacctgctcatctcccaggctgttcggtatttgagg gacccagcggtgcatccacgagacaagcagcggatgaagcaggaactcagctctgagctg agtacgctgctctcaagcctgtctcgttactttcgccggggcggcccctcttctccagcc agtggggttcttccctccccccagggaaagtctgcctccaagcttggccctgaggggcag gagcctttgattcagctggtacaagcctttgtcagacatgtgcagagatag

DBGET integrated database retrieval system