Caretta caretta (Loggerhead turtle): 125623356
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Entry
125623356 CDS
T09292
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125623356 (GAPVD1)
Membrane trafficking [BR:
ccay04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125623356 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
125623356
NCBI-ProteinID:
XP_048678505
LinkDB
All DBs
Position
16:complement(2212219..2275555)
Genome browser
AA seq
1510 aa
AA seq
DB search
MKVFESEPQYTSEYCVVLSPSKMVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTA
EKLYHTAWISKQQRINLDRLIITSAEASPAECCQHAKVLEDTQFVDGYKQLGFQETAYGE
FLNRLRENPRLIASSLVAGEKLSQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIE
FELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETD
ANKLIERFSPAQQEKLFGEKGTERFKQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPH
SLRWILSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVAR
FNLMQVGRLLQQLAMTGSEEGDPHMKSNLGKFDKSCVAAFLDVVISGRAVETPPMSSVNL
LEGLSRTVVYMTYSQLTNLVGFMRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMT
PYNTPQLSPATTPANKKNRLPIGQQLAAITAWDTSTTNLTAHINLVTPFATRSRNRSNIP
MDQHGDHEGSSQDSIQEVQPEEVLVISLGTGPQLTPGMMSENEVLNMQLADGGQGDVPVD
ETKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEA
LQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDED
RLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQ
EERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSS
DFGGKDSVTSPDMDETAHGASQLTSPPSQSDSLLALFDPLSSHEGVSAVVRPKVHYARPA
HPPPDPPILEGTMGGNEARLPNFGSHILIPTDLEAFKQRHSYPERLVRSRSSDIVSSVRR
PMSDPGWNRRPGNEERELPTQTPNVGAAASVVAPQSSSSSPSKDSCRGEIEERKDSDDEK
SDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDFVSERFSTLQDDPSPRLSAQAQAAE
DILDKYRNAIKRTSPSEGAIVNYESAEVIGDGESIHDSPRDEALQNMSADDLPDSASQVA
QPQDSAFSYRDAKKKLRLALCSADSIAFPMLSHSTRNGLPDHTDPEDNEIVCFLKVQLAE
AINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTH
AHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDF
LQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLSFYPNQDGDILRDQVLHEHI
QRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLL
SLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLTGEESYWWMQFTAAV
EFIKTIDDRK
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtttttgagagtgaacctcagtatactagtgagtactgtgtagtcctctcaccc
tcaaagatggtgaagctagatattcacactctggctcatcacctcaagcaagaacgactc
tatgtaaactcagaaaagcaacttattcagagattaaatgcagatgtattgaagacagct
gagaaactgtaccacacagcctggatttccaagcagcaaaggattaacttggacagactt
atcataacaagtgctgaagcttctcctgctgaatgctgccagcatgccaaagtcttggag
gacacacagtttgttgatgggtacaagcagttgggatttcaagagactgcttatggagaa
ttcctcaacagattgagagagaaccctaggcttattgcttcctctctggttgctggagag
aaactcagccaggacaacacacaaagtgtcattcacacggtctttacctccatctatggc
aattgcatcatgcaggaagatgagagttacctccttcaagttttgcgttacttgatagaa
tttgaactgaaggaaagcgacaatcccagacggcttttgaggagaggtacctgtgcattc
agcattttattcaaacttttttctgagggactcttttctgcaaaactgttccttactgca
acattgcatgagccaatcatgcagctgctggtggaagatgaagaccacctagaaacagat
gcaaacaaattgatcgagaggttctctcccgcgcaacaggaaaaactctttggggagaaa
ggcacagaaaggttcaaacaaaaagtccaagaaatggtggattccaatgaggctaagtta
gtggctttggtaaacaaattcattggttatctcaagcagaacacatactgctttccacat
agcttgagatggattttatcacaaatgtataaaacactctcctgtgtagaccggctggaa
gttggggaggtgcgagcaatgtgcacggatcttctgcttgcatgtttcatttgtcctgca
gttgtcaacccagaacagtatggaataatttccgatgccccaataaatgaggtggcaaga
tttaatctgatgcaggtcgggagacttttgcagcagttggcaatgacaggctctgaagag
ggagatccgcacatgaagagcaaccttggcaaattcgacaaaagctgtgttgctgctttc
ctggatgttgttattagtgggcgcgctgtggaaacccctccgatgtcctcagttaacctt
ctagaagggttgagtaggactgtggtttatatgacatacagccaacttactaatctggtt
ggttttatgcgaaatgtaatgtcaagtgaccaactgaaggaagatcggatggctctggaa
aacttgttggcaaacttaccccagaacaaacccgggaaaagtagcagccttgaaatgact
ccttacaatactccacaactctcccctgcaactactccagccaacaaaaaaaatcgactg
cctataggacaacagttggcagccattactgcctgggatacttctaccaccaatctcaca
gctcacattaatctagtaaccccatttgctacccgtagcagaaatagatcaaatattcca
atggaccaacatggagaccatgaaggatcctcccaggattctatacaggaagttcagcca
gaagaagtactggttatttctttgggaacaggtccgcagcttactccgggtatgatgtca
gaaaatgaggtcttgaacatgcagcttgccgatggaggacaaggagatgtccctgttgat
gaaaccaaactccatggtaaacctgataaaaccttgcgcttttccctctgcagtgataat
ctggaaggaatatctgaaggtccttcaaatcgctccaattctgtgtcctctttggattta
gaaggagagtctgtgtcagagcttggtgcagggccttctgggagcaatggtgttgaagcc
ctgcagctgttagaacatgaacaagctacgactcaggataatcttgatgacaagctccgt
aaatttgaaattcgtgatatgatgggattgactgatgatagggacatatcagaaactgtg
agtgagacctggagcacagatgtcttgggcagtgactttgatccaaatattgatgaagac
cgtttgcaagaaattgcaggtgcagctgcagagaacatgcttggcagcttgctgtgtttg
ccgggttcaggatctgtgctgcttgacccctgcacagggtcaaccatatccgaaaccacc
agtgaagcttggagtgtggaggtattgccaagtgattcagaggccccagacctaaagcag
gaggaaagactgcaggagctggaaagctgttctggactgggcagcacctctgatgacaca
gatgtgagggaggtcagttctcgtcccagtacaccaggcctcagcgtcgtgtcaggtatt
agtgcaacctctgaggatattcctaataagatcgaggaccttaggtctgagtgtagctct
gactttggaggtaaagattctgtgacaagtcctgatatggatgaaacagctcatggagcc
agtcagttgacttctcccccttctcagtcggactctttgcttgcattgtttgaccctttg
tcatcacacgaaggtgtatcagcagtggttcggcctaaagtgcactatgcaagacccgct
catccgccaccagatcccccaatcttggaagggactatgggaggtaatgaggccagatta
ccaaattttggctcccacatcttaatcccaaccgatttggaggcgttcaaacaaaggcat
tcctacccagaaagactggtccgcagcagaagctctgacatagtgtcatcagttcggaga
cctatgagtgatcctggctggaacaggcggcctggtaatgaagaaagggagcttcctaca
caaacacccaacgttggggcagctgcttcagtggttgcacctcagtcctcttcatcatcc
cccagtaaagactcctgtagaggagagattgaggaacgaaaagatagtgatgatgagaaa
tctgacaggaacaaaccctggtggagaaagcgtttcgtttctgccatgcccaaagctcct
ataccatttagaaaaaaagaaaaacaagaaaaggacaaagatgactttgtgtctgagaga
ttctcaacacttcaagatgatcccagtcccaggctaagtgcacaggcacaggctgcagag
gatatcctggacaaatacaggaatgctattaagcgaaccagcccaagcgaaggagctata
gtaaattacgaaagtgcagaggtaattggagatggtgaaagtatacacgactctccacgt
gatgaagccctgcagaatatgtcagctgatgacctcccagattctgcaagtcaagtagca
cagccacaagactctgctttctcttacagggatgcaaagaagaaactgagactggctctt
tgttcagcagattccattgccttcccaatgttgtcccattcgacaagaaacggcctacca
gatcacaccgaccctgaagacaacgaaattgtgtgcttcctgaaagttcagttagctgaa
gctattaacctccaagataagaatttgatggcccaactgcaggagacaatgcgctgtgta
agccgctttgataaccggacatgtcgaaagctgctggcctccattgcagaggattatagg
aaaagggctccatacattgcttatttaactcggtgtcgccaaggcctgcagaccacacac
gcccatctggaaagactcctgcagagggttctacgtgataaggaagtggccaacagatat
ttcaccacagtttgtgtgaggttacttctggaaagcaaagaaaaaaagataagggaattc
attcaagatttccagaaactcactgcagcagatgataaaacagcccaagtagaagacttt
cttcagtttttatatggggccatggcccaggatgtcatctggcaaaatgccagtgaagag
cagctccaggatgcacagctagccatagaacgcagtgtgatgaatcgcattttcaaactc
tcattctaccctaatcaggatggagacattttgcgtgaccaggtccttcatgagcatatc
caaaggttgtctaaggtagtgactgcaaaccaccgagcccttcagataccagaggtgtat
ctccgggaggccccatggccatctgcacagtccgaaatccgcacaatcagcgcttacaaa
accccacgggacaaagtgcagtgcattctgcgaatgtgttcaaccatcatgaacctgctg
agtttggccaatgaagattcagtccctggggcagatgactttgttcctgttttggtgttt
gttctgataaaggcaaacccgccctgcttgttgtccacagttcagtacattagtagcttc
tatgctaactgtttaactggagaagaatcttactggtggatgcagttcacagcagcagtt
gaatttattaaaaccattgatgatcgcaagtga
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integrated database retrieval system
