Caretta caretta (Loggerhead turtle): 125623419 Help Entry 125623419         CDS       T09292                                  Symbol TNC Name (RefSeq) tenascin isoform X1   KO K06252   tenascin Organism ccay  Caretta caretta (Loggerhead turtle) Pathway ccay04510   Focal adhesion ccay04512   ECM-receptor interaction ccay04518   Integrin signaling Brite KEGG Orthology (KO) [BR:ccay00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125623419 (TNC)    04518 Integrin signaling     125623419 (TNC)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125623419 (TNC)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ccay00536]     125623419 (TNC) Glycosaminoglycan binding proteins [BR:ccay00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    125623419 (TNC) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 EGF_TEN EGF_Teneurin Fibrinogen_C EGF_2 EGF_Tenascin Fn3_Dep-1_3rd FN3_DSCAM-DSCAML_C Fn3_Dep-1_2nd EGF hEGF Pur_ac_phosph_N DUF7949 NDNF Motif Other DBs NCBI-GeneID:  125623419 NCBI-ProteinID:  XP_048678719 LinkDB All DBs Position 16:17686317..17781636 Genome browser AA seq 1869 aa AA seqDB search MGLPLQVLTCAIIALLHHHVNGGLIKRIIRQKRETGLNVTLPEDNQSVVFNHVYNINVPM GSLCSVDLDSANEDADLKPQVEPSKTYQEHTVNEGNQIVFTHRINIPRRACGCAAAPDIK DLLSRLEELEGLVSSLRDQCSSSAGCCHSSLTAEGQVDTTPYCSGRGNYSTEHCGCICEP GWKGPNCSEPECPNNCNNKGHCVNGKCICVEGFTGEDCSQLTCPNDCSDQGKCINGVCLC FEEYTGEDCSEELCPVACREHGKCVNGRCVCDEGFTGEDCSEPLCLNNCNNRGRCVEKEC VCDEGYTGEDCGELICPNDCYDRGRCVNGTCYCEEGFTGEDCGELTCPNNCNNNGRCSNG LCICNEDFVGDDCSERRCPKDCNKRGRCVNGKCVCNEGFAGAACGQVKCPKDCNNRGRCV NGQCVCQEGFMGEDCSELRCPSDCSNRGRCVNGQCECDEGFTGEHCSQLKCPNDCNNRGR CVNGQCVCEEGFVGEDCGELRCLNDCNNRGLCVNGQCVCEEGFVGEDCGELRCPNDCNEH GRCVNGQCVCDEGYMGEDCAELRCPNDCNNRGLCVNGLCQCDNGFTEIDCSQQRCPSDCN NRGLCVNGLCQCDEGFRGVDCGERSCPNNCNDMGRCVDGQCICDDGYEGDDCSNVSSPSD LTVTDVTDQTVNLEWKNENLVNEYLITYVPTSVGGLELQFRVPGNKTSATIRELEPGVEY FIRVFAILKNKKSIPISARVATYLPAPEGLTFKSIRETSVQVEWDPLNISFDGWELVFRN MKKEDNGDITNSLKRPDTSYMQPGLAPGQQYNVSLHVVKNKTRGPGLFRVFTTKLDGPSQ IEARDVTDTTALITWFKPLAEIDDMELTYGPKDVPRDRTTIDLFEDESQYSIGNLKPHTE YEVTLISRRGDMASDPVKEIFVTDLDAPKNLKRLSQTDNSITLEWKNSQASIDNYRIKFA PISGGDHAEITVPRSNQVTTKATLTGLRPGTEYGIGVTAVKQDRESAPATMNAATDLDNP KDLEVTDNTETTLSLHWRRPLAKFDRYRLTYIIPSGMKNEIEIPADSTSYLLRGLEAGTE YTITLVAEKGRHKSKPTMVKESTEEEPELGKFTVSKVSWDGFQLNWTAAEGAYETFVIQV QEPNNPEEAQNLTVPGSLRFVNVTGLKANMPYTVTLYGVIQGYRTKPLSVNTTTAAEPEV GELTVSSITPESFNLSWTATDEAFKTFTIEIIDSSRLQEPMEYNISGNLRTAHISGLSPK TDFIVYLSGSTRGFRTKAISVAATTEAEPEVDNLLVSDATPDGFRLSWTADDGVFDSFVL KIRDTDRQSDPRELIVPGHERTQDITGLKEGTKYDIELYGLISGRRSQPINVVATTAVGS PKALTFSDITENSATVSWSPPRTRVESFRISYIPITGGTPNVVTVDGTKTRTKLVKLIPG VDYTVSIISIKGFEESEPISGILTTALDSPSGLVAVNITDSEALAVWQPAIATVDNYVIS YIAEDDPEVTQTVSGNTVEYDLNGLRPATEYMLRIYAVKGPQKSETVFTKFTTGMDAPRS LNAIEVQSEAAVLSWRPPRASVTGYLLIYESIDGKVKEVILGPEATSYSLSELSPSTQYT VKLQALNRALKSKIIQTIFTTTGLLYPYPKDCSQVLLNGESTSGLYTVYMNGNKSQSVEV YCDMTSDGGGWIVFLRRHNGKEDFYRNWRTYTAGFGDPKDEFWIGLETLHKITSQGQYEL RVDLRDKGETAYALYDRFSVGDSKTRYRLKVDGYSGTAGDSMTYHNGRSFSTFDKDNDAA ITNCALSYKGAFWYKNCHRVNLMGRYGDNSHSQGVNWFHWKGHEYSIQFAEMKLRPISFR NLEGRRKRA NT seq 5610 nt NT seq  +upstreamnt  +downstreamnt atggggcttcccttgcaggttttgacctgtgccatcatagctttgctacaccaccatgtc aacggtgggctcatcaagagaattatccggcagaagcgggagaccgggttaaacgtgacc ttgccggaggataaccagtctgtggtctttaaccacgtctacaacattaatgtacccatg ggctccctctgctctgtggacttggactcagctaatgaggacgcagacctgaagccccag gttgagccaagcaagacctaccaggagcacacggtgaacgaggggaaccagattgtcttc acacaccgcatcaacatcccccgccgggcttgtggctgtgcagctgcccctgacatcaag gatctgctgagcagactggaagagctggaggggctggtatcctctctacgagatcagtgc tccagcagcgctggctgctgccacagcagcctaacagcagagggacaagtggacaccacg ccgtattgcagtggacgagggaactacagcactgagcactgtggctgcatttgtgaacct ggctggaaaggacccaactgctcagaaccagaatgcccgaacaattgcaacaacaaaggc cactgtgtcaatggaaaatgtatctgtgttgagggcttcactggggaggactgcagccag ctcacctgccccaatgactgcagtgaccaaggcaaatgcatcaatggtgtctgtctgtgc tttgaggagtacaccggtgaggactgcagtgaagagctttgcccggtggcatgcagggag catggaaagtgtgtgaacggtcggtgtgtgtgtgatgaaggcttcaccggtgaggactgc agtgagccgctctgcctgaacaactgcaataaccgtgggcgctgtgtggagaaagagtgt gtgtgcgacgaaggctacacaggtgaagactgcggcgagcttatctgccccaatgactgc tacgaccgtggccgctgtgtcaacgggacctgctactgtgaggagggcttcaccggggag gactgtggggagcttacctgccccaacaactgcaacaacaatggccgctgcagtaatggg ctgtgcatctgcaatgaggactttgtgggcgacgactgtagcgagcggcggtgccccaag gactgcaacaagcgggggcgctgcgtcaacgggaagtgcgtgtgcaacgagggctttgct ggcgccgcctgtggccaagtgaagtgccccaaagattgtaacaaccggggccgctgcgtc aacgggcagtgtgtgtgccaggagggcttcatgggcgaagactgcagtgagttgcggtgt cctagcgactgtagcaaccggggccgctgtgtcaatgggcagtgtgagtgtgacgagggc ttcacaggcgagcattgcagccagctgaagtgccccaatgactgtaacaaccgggggcgc tgcgtcaacgggcagtgtgtgtgtgaagagggcttcgtgggcgaggactgcggagagctg aggtgcctcaacgactgtaacaaccgggggctctgcgtcaacgggcagtgtgtgtgtgaa gaaggcttcgtgggcgaggactgcggagagctgaggtgtcccaacgactgtaatgagcac gggcgctgcgtcaatgggcagtgcgtgtgcgacgaggggtacatgggggaggactgtgct gagctgaggtgccccaatgactgcaacaaccgggggctctgcgtcaacgggctgtgccag tgtgacaatgggttcactgagatcgactgtagccaacagcggtgtcccagtgactgcaac aaccgggggctctgcgtcaacgggctatgccagtgcgacgagggctttcgaggagtggac tgcggtgagcgatcctgccccaacaactgcaatgacatgggccgctgcgttgatgggcaa tgcatttgtgatgacggatacgaaggggatgactgctccaatgtgtcctctccaagcgac ttgacagtgacagatgtgacagatcagacggtcaatctggaatggaagaatgagaatcta gtcaatgagtatctcatcacctatgttcctaccagtgttggtggcctagaactgcagttc agggtgcctggaaacaagacatctgctaccatccgtgaactggagcctggtgtggaatac tttatccgtgtgtttgccatcctaaagaacaagaagagtattccaatcagtgccagggtg gcaacctatctgcctgctcctgaaggtctgacattcaaatccatcagggagacatctgtg caggtggagtgggatcctctgaacatttcatttgatggctgggagctcgtcttccgaaat atgaaaaaggaagataatggggacataaccaacagtttgaagagaccagacacatcatat atgcagccaggtctggcaccaggacaacagtataacgtgtccctgcatgtagtgaaaaac aaaaccagaggacctgggttgtttagagtgtttaccacaaagcttgatggcccaagccag attgaggcaagagatgtgacagacaccacagctttaatcacatggttcaaacctttggct gaaattgatgacatggaactcacctacggaccaaaggatgttccaagggacaggacgacc atcgacctctttgaggatgaaagccagtactccattgggaatctgaagccacacacagag tatgaggtgacgctgatctctcggcgtggggacatggccagcgaccctgtgaaggaaatc tttgtcacagacttggatgcaccgaagaacctgaagcgcctgtctcagacagacaacagt atcaccttggagtggaagaacagccaagccagcatcgataactacagaatcaagtttgct cccatctcaggtggagaccatgctgaaataactgtgccaaggagtaaccaggtcacgacc aaggctacactcacaggtctgaggcctggaactgaatatggcattggagtgacagcagtg aagcaggacagagaaagcgctcccgctactatgaatgctgcaaccgatctggataacccc aaggacttggaggtcactgataacactgaaacgaccctctccctccactggagaagacca ctggccaagttcgaccgctaccgcctcacttacattatcccctctgggatgaagaatgaa attgagataccagcagatagcacctcttacctcttgcgagggctggaggctggtacagaa tataccatcaccctagtggcagagaagggcaggcacaaaagcaaacccacaatggtgaag gagtctactgaggaggaacctgagctcggaaagtttacagtatcgaaggttagctgggat ggtttccaactcaactggacagccgcagaaggggcctatgagacttttgtcattcaggtg caggagcctaacaatccagaagaagctcagaatctcacagtcccaggcagcctacgcttt gtgaatgttactggcctcaaggctaacatgccctacactgtcacactttatggtgtgatt cagggctacaggaccaaacccctttctgttaacaccacaacagcagcagaacctgaagtt ggtgaactaacggtttccagcattacccccgaaagcttcaacctttcctggacagccacg gatgaggccttcaagacctttaccattgaaattattgattctagcaggttacaggagccc atggagtacaacatttcaggcaacttaaggactgctcatatctcagggctttcccccaaa actgattttattgtctacctctctgggagcacgcgtggtttccgcacaaaggcaataagt gttgcagctactacagaagcagaacccgaggtcgacaaccttctggtttcagatgctacc ccagatggcttccgtctgtcttggaccgcagatgatggggtcttcgacagctttgttctt aaaatcagggataccgacaggcagtctgacccacgggaactaatagtgccaggccatgaa cgcacccaagatataacagggctgaaagagggtactaagtatgacattgaactctatgga cttatcagtggacgacgttcccagcccataaatgtagtagctaccacagctgtgggatca cccaaggcactcacgttctctgacattactgaaaactcagccacagtcagctggtcacct ccaaggacccgagtagagagcttccggatttcatacatccccataacaggaggtactccc aatgttgtgacagtggatggaaccaagactaggaccaagctggtgaaactgatcccaggt gtagactacactgtcagtataatctccatcaaaggatttgaagaaagcgagcctatctct ggaattctgactacagctctggacagcccatcaggactggtagcagtgaatatcacagac tctgaggccttggcagtctggcagccagcgattgccacagtggacaattatgtcatctcc tacattgctgaggatgatccagaagttactcagacggtgtctgggaacactgtggaatat gaccttaatggccttcgtcctgcaactgaatatatgctaaggatctatgcagtaaaggga cctcagaagagtgagacggtcttcaccaaattcactacaggcatggatgcaccaagatct ttgaatgccattgaggtccagtcagaagcagcagtattgtcatggaggcctccacgggct tctgtcaccggctatctccttatctacgagtctatcgatggcaaagtcaaggaagtcatc ctgggacctgaggcaacttcctacagcctgtctgagctaagcccatccacccagtacaca gtgaagctgcaggcactgaacagagccctgaagagcaagataatccaaactattttcacc acaactggacttctctatccttaccctaaagactgctcccaagttctgctgaatggagaa agtacctctggactttacaccgtatatatgaatggaaacaagtcccagtctgtggaggtg tattgtgacatgacctctgatggaggtggatggattgtgtttctgaggcgtcacaatgga aaggaggatttctacaggaactggaggacttacactgctgggtttggggatcccaaggat gaattctggataggtctggagaccctccacaaaatcacttcccagggccagtatgagctg cgtgtggatctgcgagacaagggcgagacagcttatgctctctatgaccggtttagcgtg ggagactccaagacccgttatcggctaaaagtggatggatacagtggaaccgcaggtgac tccatgacctatcacaatggacggtccttctccacctttgataaggacaatgacgctgcc atcacaaactgtgcgttgtcctacaaaggtgctttctggtacaagaattgtcaccgagtc aatctgatgggcagatatggggacaacagccacagtcagggtgttaactggttccattgg aagggccatgaatactccatccagtttgcagaaatgaagttgagacccatcagcttccgg aatctagaagggagacgaaagagagcataa

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