Caretta caretta (Loggerhead turtle): 125623536
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Entry
125623536 CDS
T09292
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125623536 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
125623536
NCBI-ProteinID:
XP_048679029
LinkDB
All DBs
Position
16:complement(6860610..6941902)
Genome browser
AA seq
2536 aa
AA seq
DB search
MQQLLVQSLLLSLLPVLSRGLRCTQPAESCLNGGKCETYSNGTGVCLCNSAHVGDRCQLP
NPCLSSPCKNAGTCHPVIRGNAVDYTCSCRLGFTDRLCLTPEENACLNNPCRNGGTCDLL
TLTDYKCRCPPGWSGKTCQQADPCASNPCANGGQCVPFEAHYVCKCTAGFHGANCKQDVN
ECNTSPPICKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQTGDTT
YDCTCLPGFAGQNCEDNIDDCPGNNCKNGGTCVDGVNTYNCQCLPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFQGATCHDRVASFYCE
CPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACNQDIDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCIDKINEFHCECPTGFNGHLCQYDIDECASTPCKNG
AKCIDGPNTYTCECTEGFAGAHCEVDKNECDPDPCHYGTCRDGIAAFTCLCQPGYTGHLC
DVNINECQSHPCKNGGTCQDRNNAYNCLCLKGTTGPNCEINLDDCASNPCDYGKCLDKIN
GYECTCEPGYTGRMCNINIDECAGNPCHNGGTCKDGINGFTCICPEGYHDPMCVLEVNEC
NSNPCIHGKCNDGLNGYRCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGATCEDVLAPCAASPCKN
GGECRESEDYESFSCVCPSGWQGQTCEIDINECVKSPCRNGATCQNTDGSYRCNCKAGYT
GRNCDTDIDDCKPNPCHNGGSCSDSIDAFFCDCLAGFRGPKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCVCPPGFTGSYCEH
DINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNL
YRCECNSGWTGLYCDVPSVSCDVAAKQQGVDVAHLCRNSGLCVDTGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCSPFFDPITLGPKCFNNGKCTDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRQGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCDPAFTG
PDCQHPVSSPCNSNPCYNGGTCEYFSDAPPYYQCNCPANFNGLYCHILDFDFRGGVGQDI
TPPKIEEKCEIPVCAGFAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYF
NDGKCDSQCNNAGCLYDGFDCQKVEGQCNPLYDQYCKDHFSDGHCDQGCNNAECEWDGLD
CANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNPKGEYMIFPYY
GNEEELKKHHIKRSTENWSDMPSAVFNTIKTSLSSRVGERQRRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPQRNSQLYPMYVVV
AALVLLAFIGVGVVVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNAS
DGTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAP
TPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASL
HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINCHADVNAVDDLGKSALHWAAAVNN
VEAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI
AQERMHHDIVRLLDEYNLVRSPPLHNGPLGAPTLSPPLCSPSSYIGNLKPNVQGKKARKP
STKGLSCNSKDSKDIKARRKKSQDGKGCLLDSSSVLSPVDSLESPHGYLSDVASPPLMTS
PFQQSPSMPLNHLPGMPDAHMSINHLNMAGKQDMAMGSSSRMAFDSVPPRLSHLPVSSPS
AVMSSAPMNFTVGGAASLTGQCDWLTRLQNGMVQNQYNPMRNNIQPGAHQQTQALQHGMM
TSLHNGMPTTTLSQMMSYQPMPNTRLASQPHLMQAQQLQQIQQQQNLQQQLQQQNLQQHH
NTSSNTNAHISQNFLGNELNQSDMQQVSSTTMTVHTILPQETQILSTSLPSSLTQPMTTT
QFLTPPSQHSYSSPLDNTPNHQLQVPDHPFLTPSPESPDQWSSSSPHSNISDWSEGISSP
PTSMQSQIGHIPEAFK
NT seq
7611 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcttctggtgcagagcctcctgctgtcgctgctgcccgtgctgagccgaggt
ttacgatgtacacagcctgccgaatcctgcttgaatggaggaaagtgtgaaacttactcc
aatgggactggggtatgcctatgcaacagtgcccacgtaggtgaccggtgtcagctgcca
aacccctgcctcagctccccgtgcaagaacgccggcacctgccacccggtcatccgtggc
aacgctgtggactacacctgttcctgccgcctgggcttcacagacaggctgtgcctgacg
cccgaggagaacgcctgcctcaacaacccctgccgcaatggagggacctgcgacctgctc
acgctgactgactacaagtgccggtgccctccggggtggtcaggtaagacctgccagcag
gcagatccctgtgcctccaatccctgtgccaacggagggcagtgtgttcctttcgaagcc
cattacgtctgcaagtgcacagcgggcttccacggggccaactgcaagcaagacgtgaac
gagtgcaacaccagtcctcccatctgcaagaacggcgggagctgcaccaatgaggtcggg
acctaccagtgttcctgcaagccagcatacacgggccagaactgtgagcacctctatgtg
ccttgcaacccctcgccctgccagaacgggggcacttgccgtcagaccggcgacaccacc
tatgactgcacatgtcttccaggttttgctggtcagaactgcgaggacaacattgatgac
tgtcctgggaacaactgcaagaatggaggcacctgtgtggatggagttaacacctacaac
tgccagtgccttcctgagtggacaggccagtattgcactgaagatgttgatgagtgccag
ctcatgccgaatgcctgccagaatggaggaacgtgccacaacaaccacggtggctacaac
tgcgtctgtgtcaacggctggactggcgaggactgcagtgagaacattgacgactgcgct
atggctgcctgcttccagggtgctacctgccacgaccgggtggcctctttctactgcgag
tgcccacatggccgcacaggcttgctgtgccacctggatgacgcctgcatcagtaacccc
tgcaacgaaggctctaactgcgacaccaaccctgtcaacggcaaagccatctgcacctgc
ccctcgggttacacgggcccagcctgtaaccaagacatagacgagtgctctctaggagcc
aatccttgtgagcatgctgggaaatgcatcaacacccaagggtccttccagtgccagtgt
ctccaggggtattcgggcccccgctgtgagatagacgtcaatgaatgcctctcgaatccg
tgccagaacgatgccacctgcctggatcagattggtgaattccagtgtatctgcatgcca
ggttacgagggcgtttactgtgaaatcaacacggacgagtgtgccagcagcccctgcctg
cacaacgggaactgcatcgataagatcaacgagtttcactgcgagtgccccacaggcttt
aatgggcacctgtgtcaatacgacatcgacgagtgcgccagtacgccgtgcaagaacggg
gctaagtgcatagacggccccaacacctacacctgcgagtgcacagaaggatttgcgggt
gctcactgcgaagtcgacaaaaacgaatgtgaccctgacccgtgccactacgggacctgc
agagacggcatcgctgccttcacctgtctctgccagcctggctacacgggccacctctgt
gacgtcaacatcaacgagtgccagagccacccatgcaaaaatggagggacctgccaggac
aggaacaacgcctacaactgcctttgcctcaaaggcaccacagggcctaactgtgaaatc
aatctggacgactgtgctagcaacccgtgtgactatggcaagtgcctagacaagatcaat
ggctatgagtgtacctgcgagccaggatacacagggagaatgtgcaacatcaacatcgac
gagtgtgccggcaacccgtgccacaatggcggaacctgtaaggacggcatcaatggcttc
acgtgcatctgccccgagggataccacgatcccatgtgtgtgctggaagtgaatgagtgt
aacagcaacccctgcatccatgggaaatgcaatgatggactcaatggctacaggtgtgat
tgtgacccaggctggagcgggacaaactgtgacatcaacaacaacgagtgtgaatcgaat
ccttgcatgaatgggggcacctgcaaggatatgaccagcggatacatctgtacctgccgg
gagggattcagcgggcccaactgccagaccaatatcaatgaatgtgcttccaacccttgc
ctgaatcagggaacctgcatagatgatgtagccggctacaaatgcaactgtctcctgccg
tatacaggggctacgtgcgaggatgtgctagctccgtgtgcggccagtccgtgtaagaat
ggcggcgagtgcagagagtcggaggactacgagagcttctcctgcgtctgcccctctggc
tggcaaggtcaaacatgtgagattgacatcaatgaatgtgtgaaaagcccctgtcgaaat
ggcgccacgtgccagaacacagatgggagctaccgctgcaactgcaaagcaggctacacc
ggccgcaactgcgacaccgacatcgacgactgcaagccaaatccctgccataatggtggc
tcctgctctgacagcatcgacgccttcttctgcgactgcctggcaggcttccgggggccc
aaatgcgaggaggacatcaacgagtgcgccagcaacccctgcaagaatggggccaactgc
acggattgtgtcaacagctacacgtgcacctgcccctctggcttcagtgggatccactgt
gagaacaacacacctgactgcacagaaagctcctgttttaatgggggaacctgcgtggac
ggcatcaataccttcacctgcgtgtgcccaccgggcttcacaggcagctactgtgagcat
gacatcaacgaatgcgactccaagccgtgcttgaatgggggcacctgccaggacagctat
gggacctacaagtgcacctgtccgcagggctacaccggcctcaactgtcagaatctggtg
cgctggtgtgactcctctccctgcaaaaacggaggcaagtgctggcagaccaacaacctg
taccgctgcgagtgcaacagcgggtggacgggcctgtattgtgacgtccccagcgtatcc
tgtgatgtggctgcgaagcagcaaggtgtcgacgtggcgcacctgtgcaggaactccggc
ctctgcgtggatacaggcaacacgcacttctgccgctgccaggccggctacaccggcagc
tactgtgaggagcaggtggacgagtgctccccgaacccctgccagaatggagctacgtgc
acggactacctgggaggctactcctgtgagtgtgttgctggctatcacggagttaactgc
tcagaggagatcaatgagtgcctgtctcacccatgccagaatggaggaacctgcatcgat
ctcatcaatacctacaaatgctcttgccccagagggactcaaggggtgcactgtgaaatc
aacgttgatgattgcagccctttctttgatcccatcactctggggcccaagtgctttaac
aacggcaaatgcacagaccgagtgggcggctacagctgcatctgcccacctggcttcgtg
ggggagcgctgcgagggggacgtcaatgaatgtctgtccaacccctgtgatgcgcggggg
acccagaactgcgtgcagcgcgtcaacgattacaagtgcgagtgcaggcaggggtatgca
ggccgtcgctgtgataccgtggtggatggctgtaagggcaaaccctgcaggaacggtgga
acatgtgcagttgctagcaacactggccggggcttcatctgtaaatgccccccgggtttt
gtcggcgccacttgtgaaaacgactcgcgcacctgtgggaacctgcactgcctgaacggc
ggcacctgcatctccatccacaagagctccaagtgcatgtgtgatcctgccttcaccggg
ccagactgccagcaccccgtcagcagcccttgcaattcaaacccatgttacaacgggggc
acctgtgaatacttcagtgacgctcccccatattaccagtgcaactgccctgcaaatttc
aatggcctatactgccacatcctggatttcgatttccggggaggcgttggccaggacatc
accccacccaaaattgaagagaaatgtgagatacccgtttgcgcgggtttcgctggcaac
aagatctgcgatgggaagtgcaacaaccatgcctgcggctgggatggaggggactgttcc
ctcaacttcaacgacccctggaagaactgctcccagtcgctgcagtgctggaagtacttc
aacgacgggaagtgcgattcgcagtgcaacaacgctgggtgtctgtacgatggctttgac
tgccagaaggtggaagggcaatgcaatcctctgtatgaccaatactgtaaagatcacttt
tcagatggtcactgcgaccaggggtgtaacaacgctgagtgtgaatgggatggtctagac
tgtgccaacaacatgcctgagaaacttgcagatggcactttggtagtggtggtcctgata
accccagagaacctgaagaacaactccttcaacttcctccgggagctcagccgcgtcctt
cacaccaatgtggtcttcaagaagaaccccaagggagagtacatgatcttcccatactac
ggcaatgaagaggagctgaaaaagcaccacatcaagaggtcaacagagaactggtcagac
atgcccagcgccgtcttcaacacaataaagacgtccctctcatcgcgtgtcggtgaaagg
cagcggcgagagctggatcagatggatatcagaggatccatcgtatacttggagatcgac
aaccgccagtgtatccagtcctcctcgcaatgctttcagagtgcaactgatgtggcggct
ttcctgggtgccttggcctcgcttggtaacctgaacatcccctacaaaatagaagccgtt
aaaagtgaaacagctgagccccagaggaactcccagttgtatcctatgtatgtggtggtg
gctgcactggtcttgcttgctttcattggagtgggagtagtggtatctcgaaagcggcgc
agggagcatgggcagctctggttcccagagggcttcaaagtgacagagtcaagcaagaag
aagcgacgagaaccacttggggaggactccgtgggactgaaacccctgaaaaatgcttct
gatggcaccttgatggatgacaaccagaatgaatggggtgatgaagaaaccttggacact
aagaagttcaggtttgaggagcaggcgatgctgccagacacggacgatcagacagatcac
aggcagtggactcaacagcacctagatgcagccgacctgcgcatctcttccatggcaccc
accccaccgcaaggtgaaattgatgcagattgcatggatgtcaacgttcgaggtcctgac
ggattcaccccgctcatgatcgcttcgtgcagtggaggaggactggagactggcaacagt
gaagaggaggaggatgctcccgctgtcatctcggatttcatttaccagggtgccagcttg
cacaaccagacagaccgaaccggcgagacggcactccacctggccgcaaggtattctcgc
tccgatgctgccaaacgcctgctggaggccagtgcagatgcaaacatccaggacaacatg
ggcaggacgcccctccatgcagctgtgtcagctgatgctcaaggagtcttccagatcctg
attaggaacagagcgaccgatttggatgcccgcatgcatgatgggaccacgccgcttatc
ctggcagctcgcttggccgtggagggcatgctggaggatctgatcaattgccacgcagat
gtcaatgcagtggatgacctaggcaaatcagcactgcactgggcagctgctgtgaataac
gtagaagctgccgtggtgctgctgaagaacggtgccaataaagacatgcagaacaataag
gaggagacaccgttgtttcttgcagccagagaagggagctacgaaactgccaaagtcctc
ctggatcactttgcgaaccgtgacataacagatcacatggaccggctcccgcgggacatt
gcgcaggaacgcatgcaccacgacattgtgcggctgctggacgagtataacctggtacgg
agccctccactgcataatggcccgctgggggcgcccaccctgtctcctccactctgctct
cccagcagttacatcggcaacctgaaacccaacgtccaggggaagaaagctaggaagcca
agtaccaagggcctgagctgcaatagcaaagattccaaagacatcaaagccaggaggaaa
aaatcgcaggatgggaaagggtgccttctagatagctctagcgtgctgtcaccagtcgat
tccctggagtcaccccatgggtacctgtcggatgttgcttctcctccattgatgacctct
ccatttcagcagtccccttccatgcctctgaatcacctgccaggcatgcctgatgcccac
atgagtatcaaccatcttaacatggcgggaaagcaggatatggcaatgggcagctccagc
aggatggccttcgattcagtgcccccgcgtctctctcaccttcccgtatccagccccagc
gcagtcatgagcagtgcaccgatgaatttcaccgtgggcggagcggccagcctgaccggg
cagtgcgactggctaacaaggctgcagaatgggatggtccagaaccaatataatccaatg
agaaacaacatccagcctggggctcaccagcaaacccaagcccttcagcatggcatgatg
acctccctgcacaacggcatgcccaccactaccctgtctcagatgatgagctaccagccc
atgccgaatacaaggctggcctcccagccacatctgatgcaggcccagcagttgcaacag
atccaacagcagcagaatttacagcagcagctgcaacagcaaaatctgcagcagcatcac
aataccagctcaaacaccaacgcccacattagccaaaatttcctcggtaacgagctaaac
cagtcagacatgcagcaggtgagcagcactaccatgacagtgcacactattttgcctcaa
gagacccagatcctatcaacgtctctaccatcctccctcacgcaacccatgaccaccacc
cagtttttaactccaccctctcaacacagttactcctcccccttggacaatacacccaat
caccagcttcaggtgccagaccaccctttcttaacaccttctccggagtcaccggatcaa
tggtccagctcgtcacctcattccaacatatctgattggtcagagggaatctccagccct
cccacgagtatgcagtcacagataggacacatcccagaagccttcaagtaa
DBGET
integrated database retrieval system
