KEGG   Caretta caretta (Loggerhead turtle): 125623678
Entry
125623678         CDS       T09292                                 
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    125623678 (EXOSC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccay03019]
    125623678 (EXOSC2)
Messenger RNA biogenesis [BR:ccay03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     125623678 (EXOSC2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     125623678 (EXOSC2)
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N EXOSC1 RRP40_S1
Other DBs
NCBI-GeneID: 125623678
NCBI-ProteinID: XP_048679350
LinkDB
Position
16:complement(11490878..11500207)
AA seq 294 aa
MAAVEVRLPVARKLVAQSLAQGSDKHLVAPGDTITTDTGYMRGHGTYMGDEKLVASVAGA
VERVNKLICVKALKTRYNGEVGDIVVGRVTEVQQKRWKVETNARLDSVLLLSSMNLPGGE
LRRRSAEDELAMRDYLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTPEQKNEEAGGFVTDLEPVSLHDREVISRLRN
CILALVAQKLMLYDTSIVYCYEASHPHQIKDVLKPEVMQEIVLETRQRLLELEG
NT seq 885 nt   +upstreamnt  +downstreamnt
atggcggcagtagaggtgcggctgccggtggcccgcaagctggtggcccagagcctggcg
caggggagcgacaagcacctggtggctccgggggacacgatcaccacagacacgggctac
atgaggggccatggcacgtatatgggagatgagaaacttgtagcatctgtagcaggtgct
gtggagagagtgaacaaactgatctgtgtcaaagctctgaaaaccaggtataatggggaa
gttggtgacattgtggttgggagagtcacagaggttcagcagaaacgatggaaggtggag
accaacgccaggctggattcagtcttgcttctctcgtccatgaacctaccaggaggggag
ctgaggaggagatcagcggaggatgagcttgcaatgagggactatctacaggaaggggat
cttatcagtgcagaagtccaggcagtattttctgatggggctgtatcactgcacacacgg
agtctgaaatacgggaagcttggccagggtgtgctcgttcaggtttctccctccctcgtg
aaacgccagaagactcacttccatgatctgccctgcggcgcctctgtgatccttggcaac
aacggcttcatctggatctatccaacgcccgagcagaagaatgaagaggcagggggcttt
gtcaccgatttggagccagtttccttacatgaccgggaggtaatctcacgactccggaac
tgcatcctggctctggttgctcagaaactgatgctctacgacaccagcattgtgtactgc
tacgaggcctcccacccccatcagatcaaggacgttctcaaaccagaggtgatgcaggag
attgtgctggagacccggcagaggctgttggaactggagggatga

DBGET integrated database retrieval system