Caretta caretta (Loggerhead turtle): 125623678
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Entry
125623678 CDS
T09292
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125623678 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125623678 (EXOSC2)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125623678 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
125623678 (EXOSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
125623678
NCBI-ProteinID:
XP_048679350
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All DBs
Position
16:complement(11490878..11500207)
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AA seq
294 aa
AA seq
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MAAVEVRLPVARKLVAQSLAQGSDKHLVAPGDTITTDTGYMRGHGTYMGDEKLVASVAGA
VERVNKLICVKALKTRYNGEVGDIVVGRVTEVQQKRWKVETNARLDSVLLLSSMNLPGGE
LRRRSAEDELAMRDYLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTPEQKNEEAGGFVTDLEPVSLHDREVISRLRN
CILALVAQKLMLYDTSIVYCYEASHPHQIKDVLKPEVMQEIVLETRQRLLELEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtagaggtgcggctgccggtggcccgcaagctggtggcccagagcctggcg
caggggagcgacaagcacctggtggctccgggggacacgatcaccacagacacgggctac
atgaggggccatggcacgtatatgggagatgagaaacttgtagcatctgtagcaggtgct
gtggagagagtgaacaaactgatctgtgtcaaagctctgaaaaccaggtataatggggaa
gttggtgacattgtggttgggagagtcacagaggttcagcagaaacgatggaaggtggag
accaacgccaggctggattcagtcttgcttctctcgtccatgaacctaccaggaggggag
ctgaggaggagatcagcggaggatgagcttgcaatgagggactatctacaggaaggggat
cttatcagtgcagaagtccaggcagtattttctgatggggctgtatcactgcacacacgg
agtctgaaatacgggaagcttggccagggtgtgctcgttcaggtttctccctccctcgtg
aaacgccagaagactcacttccatgatctgccctgcggcgcctctgtgatccttggcaac
aacggcttcatctggatctatccaacgcccgagcagaagaatgaagaggcagggggcttt
gtcaccgatttggagccagtttccttacatgaccgggaggtaatctcacgactccggaac
tgcatcctggctctggttgctcagaaactgatgctctacgacaccagcattgtgtactgc
tacgaggcctcccacccccatcagatcaaggacgttctcaaaccagaggtgatgcaggag
attgtgctggagacccggcagaggctgttggaactggagggatga
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integrated database retrieval system