Caretta caretta (Loggerhead turtle): 125623726
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Entry
125623726 CDS
T09292
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125623726 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125623726 (TRPV1)
Ion channels [BR:
ccay04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125623726 (TRPV1)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
125623726
NCBI-ProteinID:
XP_048679459
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All DBs
Position
17:22426479..22446334
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AA seq
852 aa
AA seq
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MSSILGKMRKLGSSDVEDSEVTDEHTDGENSFLGTPDSLQGSQSTKVQQLPKSNIFARRG
RFGMGDSDKNMAPMDSLYQMDHLVSAPVIKFNINMERAKIHNQFAKLLSTNSIASCSEKA
FKFYDRRRIFDAVAQGDTSDLNDLLIYLHETRKHLTDNEFKEPETGKTCLLKAMLNLHDG
KNDTIPLLLEIAEKTGNLKELVNAEYIDNYYKGQTALHIAIERRNMYLVKLLVQNGADVH
ARAHGEFFRKIKGKPGFYFGELPLSLAACTNQLGIVKFLLENPYHPANIAGQDSMGNTVL
HALVEIADNTKDNTKFVTKVYNNILIVGAKINPMLKLEEITNKKGLTPLTLAAKKGKIGI
FAYILRREIKEPECRHLSRKFTEWAYGPVHSSLYDLSSIDTCEKNSVLEIIAYSSKTPNR
HEMLLVEPLNRLLQDKWDRFVKRLFYFNFFVYAMHVIILTIAAYFRPVEKHGKPPFKFEY
TTEECFRVTGEILSVLGGLYFFFRGIQYFLQRRPSLKTLLADSYSEVLFFVHSLLLLSSV
VLYFCGQELYVASMVFSLALGWTNMLYYTRGFQQMGIYSVMIEKMILRDLCRFMFVYLVF
LLGFSTAVVTLIEDDYEGQENNSSLCTRSVQLKRGRMSYNSLYYTCLELFKFTIGMGDLE
FTENYRFKSVFVILLVLYIILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILNI
ENSYLNCMISSFRSGKRVLVGTTPDDKDDYRWCFRVDEVNWSTWNTNLGIINEEPGYSVG
LKRNSSFSFKSSRVSGKNWKTLVPLLRDGSRREEAQKQPEEAKLKPILEHDYEPEDSGAR
NSKQMQKESDLQ
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccatccttggaaagatgaggaaacttggcagttctgatgtggaggactctgaa
gtcacggacgagcacacagatggtgagaattcctttctgggaacccctgacagccttcag
ggtagccagagcaccaaggtacagcagctgcccaaaagcaacatctttgctagacgaggc
cgctttgggatgggggacagcgataagaacatggcgcccatggactccttgtaccagatg
gaccacctggtttctgctcccgtcatcaagtttaatatcaatatggaaagggcaaaaata
cacaatcagtttgccaagctcctatctaccaattccattgcaagctgctcagaaaaagct
ttcaagttctatgatcgcagaaggatctttgatgctgtagcccaaggtgacacaagtgat
ctgaatgacctgctgatctatctccatgaaacccggaagcatctcacagacaatgagttc
aaagagccggaaactgggaaaacctgcttattgaaagccatgctgaatctgcatgatggg
aagaatgatacgattcccctgcttctggaaattgcggagaagacaggcaatctgaaagag
ttagttaatgcagaatatattgacaactactacaagggtcagactgctctccacattgcc
atcgagaggaggaatatgtacttggtgaagctcttggtccaaaatggagcagatgttcat
gcaagagcccacggagagttcttcagaaaaatcaaagggaaaccgggcttttattttggt
gaactgcctctttccctggctgcctgcaccaaccagctaggcattgtgaaattcctcctg
gagaatccgtatcatccagccaatatagctggccaggactctatgggcaatacagttctg
cacgcccttgtggagattgcagataacaccaaagataacaccaagtttgtaacaaaggtg
tataacaacattttgatcgttggtgccaaaattaacccgatgctgaagctggaagagatc
actaacaagaagggactgactcctttaaccctggctgcaaagaaagggaagatagggatt
ttcgcctatatccttagacgagagatcaaagagcctgagtgtaggcatctgtctaggaag
ttcaccgaatgggcctatggacccgtccactcatctctttatgacctgtcctccatagac
acatgtgagaaaaactcagtgcttgagatcattgcgtatagcagcaaaacaccaaatcgc
catgagatgctgctggtagagcccctgaacaggctgctgcaggacaagtgggaccgattc
gtcaaacgcctattttacttcaacttctttgtttatgccatgcacgttatcatcctcacc
attgccgcctacttcagacctgtggagaaacatggaaagcctcccttcaaatttgaatac
accactgaggagtgttttcgagtcaccggagagatcctgagtgtgctgggaggtctctat
ttctttttcagagggatacagtatttcctgcagaggcggccctcattgaagactctgcta
gctgacagttacagtgaggttcttttctttgtccactcgttgttactgttgagttcagtg
gtgctgtacttctgtggccaggaactttatgtggcatccatggtgttctccttggcactg
ggctggactaacatgctgtactacacccgaggcttccagcagatgggaatttactctgtc
atgattgagaagatgatcctgagggatttatgtcgtttcatgtttgtctacctagtattt
ctcttgggattttccacagctgtggtgactctgattgaagatgactatgagggacaagaa
aataacagctctctctgcacccgatcagtccagctgaagcgtggccgcatgtcatacaac
agtctgtattacacctgcctggagctgttcaagttcaccattggcatgggagatctagag
ttcactgagaactacaggtttaagtctgtctttgtcatcctgttggtcctctacatcatc
ctcacctacattctcctgctcaacatgctgattgcgctgatgggggaaactgtgaacaaa
atcgcacaagagagtaagagcatctggaaactccagagagccatcaccatcttgaatatt
gaaaacagctacctgaactgcatgataagctcattccgatccgggaagcgagtcttagtg
ggaaccacgcctgatgacaaggacgattacagatggtgtttcagagtcgatgaggtgaac
tggtccacgtggaacactaatctgggcataatcaacgaggagcccggatacagcgtgggc
ttgaagcgaaactcaagtttttcttttaagtctagcagagtttcagggaaaaactggaag
accttggttccacttttgagagatgggagcaggcgagaggaggcacagaaacagccagaa
gaagccaagttaaaacccattttggaacatgattatgagcctgaagactctggggcaagg
aattcaaagcaaatgcagaaggaatctgacttgcagtga
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