Caretta caretta (Loggerhead turtle): 125623813
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Entry
125623813 CDS
T09292
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125623813 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125623813 (SCARF1)
Membrane trafficking [BR:
ccay04131
]
Endocytosis
Phagocytosis
Scavenger receptors
125623813 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_PEAR1L
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
125623813
NCBI-ProteinID:
XP_048679684
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All DBs
Position
17:24194339..24207229
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AA seq
919 aa
AA seq
DB search
MPWLGSPLWPASPCIQTQMAQLLLLLFCLHFWPWIGSSAQELDPNGRNVCKATSLSAGLV
CCPGWKQEGRECTAAWCEGEDACKMDEVCVRPGICLCKPGFFGANCNSRCPDQYWGSDCK
KSCSCHPNGKCDPVSGQCTCNANRWGVLCQFPCQCGPHGHCSTLTGACQCEPGWWAPNCK
KQCLCRLASSHCDPVTGQCICAQGWWGRRCSFRCTCHLSPCAQDSGRCECRAGFWGPLCQ
HHCDCLHGNCNPLDGHCSCNPGYQGRSCGDPCPAGYYGSQCRYSCGHCKQNQPCSPVDGF
CLACDSGWNGTLCKKLCTPGYHGENCAQMCPSCRQGEVCHPETGACLNCDPGKTGPSCEA
SCPAGTFGDGCRFTCPDCVNGSCDPVSGECICQAGYWGTSCNETCPEGFFGANCSSPCRC
PRGPCHPHSGDCVLRSKHQGALIAGILIPLLLLLLCVTCCCCCCGTSKLDARDRTTVADG
DAISRMKHHVQGVLANLSSTLPCLSLSGYRLPRVTVSHHDTEIPFNPSFIEPPSAAWASD
SSFSSSFDTDDGGPAYCVPAREDVPAVAGFEPQEGSSKCHEFPDASAFNSEDVSQPFTIP
RTSSIARAKRPSVSFAEGTKFGPQCQRGSMETPNTTRKPKAPWGLTKVPSHQHHADPEEQ
PQQGGLPGDCYENPEPISEAEDSHQPSPRGTSGGHRMPVSSGRHVAQRVEALEAALHPNT
LDVRGKEQNVTTIYVTVGTAGKSSKSNESADGSREGTVQAVLKRLGSFQRVKRAFREEPM
VRKSTESIQKPPRRALSPERDSRDMFSQPSPPHKESSKTTDLEPCESPELLTHRHQIDVP
VKREPLIHTSPIFKRLVAQEGEDEVTGDPKKSESLEEARSLETNEQAVVEEEPKYENVSP
NRCPSGESPATSPDYEANT
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgccttggcttggaagccccttgtggccagcatcaccctgtatccagacccagatggcg
cagctgctgttgttactcttttgtctccatttctggccatggattgggagctctgctcaa
gagctggaccctaatgggaggaatgtgtgcaaggctaccagcctctctgcaggtctggta
tgctgcccaggttggaaacaggaaggcagggaatgcacagctgcgtggtgtgaaggggag
gatgcttgcaagatggatgaggtgtgtgtgagacccgggatctgcctctgcaaacctggc
ttctttggagccaactgcaactcccgctgccctgaccagtactggggctcggactgcaag
aagagctgttcatgccatcccaatgggaagtgtgatcctgtaagcggccagtgcacttgc
aatgccaaccgctggggagtactctgccagttcccatgccagtgtggacctcatggccac
tgcagcaccctcactggagcctgccagtgtgagccaggctggtgggcaccgaactgcaag
aagcagtgtctgtgcaggctggccagctcccactgtgaccctgtcacagggcagtgcatc
tgcgcccagggctggtggggtaggagatgcagcttcagatgcacctgccacctctcaccc
tgtgcccaagactcaggcaggtgtgagtgcagggctgggttttgggggccattgtgccaa
catcattgtgactgcctgcatgggaactgcaaccctcttgatgggcattgcagctgcaac
cctggctatcagggcaggagctgtggggatccttgtcctgccggttattacggatctcag
tgcagatacagctgtgggcactgcaagcagaaccagccctgctctcctgtggatgggttc
tgcctggcatgtgactctggctggaatggtaccctctgtaagaagctgtgcacgcctgga
taccatggggagaactgtgcacagatgtgtcccagctgccgacaaggggaggtctgtcat
ccagagacaggggcttgcttgaattgtgaccctggcaagacaggacccagctgtgaagca
tcctgccctgccggaacatttggagatggatgcaggttcacctgtccagactgtgttaat
gggagctgtgatccagtgtctggggagtgtatctgccaggctggctattggggcaccagc
tgcaatgagacctgcccagagggtttttttggagcgaactgttcttccccctgccgatgt
ccaaggggcccctgccacccacactctggggactgtgtgctcagatcaaagcaccaggga
gccctgatagctggcattctcatcccattactcctcctattactctgtgtcacctgctgt
tgctgttgctgtggaaccagcaagttggatgccagagacaggacgactgttgctgatggt
gatgcgatctccagaatgaaacatcacgtgcagggggtgctggcaaatctcagctccacg
ttaccttgcctctcactgagtggctacagactcccccgagtcacagtctcgcaccatgac
acagagattcccttcaatcccagcttcattgaaccgccttcggctgcctgggcctcagac
agctccttctcctcctcctttgacactgacgatgggggcccagcttactgtgtccctgcc
agagaagatgttcctgcagtggcaggctttgagcctcaggaaggcagctccaagtgtcat
gaatttcctgatgcatcagcatttaactctgaggacgtctcccagcctttcaccatcccc
cgcacatccagcatcgccagagccaagaggccctcggtgtcttttgcagaaggaactaaa
tttggccctcagtgtcaaagaggctccatggagacaccaaataccactcggaagcccaaa
gccccctggggtctcaccaaagttccctctcaccagcaccatgctgacccagaggagcag
ccccagcagggtgggttgccaggtgactgttacgaaaacccagagcccatctctgaggct
gaggatagccaccagccctcccccaggggtacctcaggaggccacaggatgccagtgtca
agtggcagacatgtggcccagagagtcgaggcccttgaggcagctttgcatccaaacact
ttggatgttagaggaaaggagcagaatgtcacaaccatttacgtgactgtggggacagca
gggaaatcgtccaagtccaatgagagtgctgatggaagcagagaggggacagttcaggct
gtactgaaacgtttgggtagtttccagagagtaaaaagggctttcagggaggagcccatg
gtgaggaaaagtactgaaagcatccagaaacctccccgcagggccctgagcccagagagg
gactccagagacatgttctcccagccatcccctccacacaaggagagctccaagacaaca
gatctggagccctgtgagtcacctgagctcctcacacatagacaccagatagatgttcct
gttaagcgagaacctctcatccacacatctcctatatttaaaagactagtggctcaggaa
ggagaagatgaggtcacaggggaccccaagaagagtgaaagtcttgaagaggccagaagc
ctagaaacaaatgaacaggctgttgttgaggaggaacccaaatacgaaaatgtgtctcca
aatcgctgtccttcaggcgagtctcctgccacctcccctgactatgaggccaacacttga
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