Caretta caretta (Loggerhead turtle): 125623841
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Entry
125623841 CDS
T09292
Symbol
SRSF1
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03040
Spliceosome
ccay05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125623841 (SRSF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125623841 (SRSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccay03041
]
125623841 (SRSF1)
Spliceosome [BR:
ccay03041
]
Common components
Common spliceosomal components
SR proteins
125623841 (SRSF1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
125623841
NCBI-ProteinID:
XP_048679741
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All DBs
Position
17:complement(17014949..17021776)
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AA seq
249 aa
AA seq
DB search
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
YRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEGETAYIRVKVDGPRSPSYGRSRSRSVVVAEAVVEATAEAAVIPQEEAEDLHATLPV
TADPVLVHK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagggggcgtgatccgcggcccagccggtaacaacgactgccgcatctacgtg
gggaacctgccgcccgacatccgcaccaaggacatcgaggacgtgttctacaagtacggg
gccatccgcgacatcgacctcaagaaccgccgcggcgggccgcccttcgccttcgtggag
ttcgaggaccccagggatgcggaggacgcggtgtacggaagggatgggtacgattatgat
ggatatcgtctgagggtggagtttccccgaagcggcagaggcacgggcagaggaggtggc
ggaggtggaggtggtggggcccccaggggcaggtatggccccccgtcccggcgatctgag
tatcgagtgatagtttccggactgcctccaagtggaagttggcaggatttaaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgttttccgagatggaactggtgtcgtg
gagtttgtacggaaagaagatatgacctacgcagtgcgaaaactggataacactaaattt
agatctcatgagggagaaactgcctacatccgtgttaaagttgatggcccaagaagtcca
agctatggaagatctcggtcacgcagcgtagtcgtagcagaagccgtagtcgaagcaaca
gcagaagccgcagttattccccaagaagaagcagaggatctccacgctactctccccgtc
acagcagatcccgttctcgtacataaatga
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