Caretta caretta (Loggerhead turtle): 125623877
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Entry
125623877 CDS
T09292
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125623877 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125623877 (RNF43)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125623877 (RNF43)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125623877 (RNF43)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
KIAA1549
DUF5305
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
125623877
NCBI-ProteinID:
XP_048679873
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All DBs
Position
17:1990651..2121449
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AA seq
824 aa
AA seq
DB search
MSAGPQLQLAVLWPWLLMATLQVRLGLTGLAVAAAVESERSAAQKAIIRVIPLKVEPITL
EGVFADVAEVTPAEGKLLQFHPLSLCNTSEDEHTSSGFVTIVKLERPDRDLHPCLSLDNK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKQQPAWPDYDVWILLTVLSTVIVIILIFVVRTKCHWNRTQDSLQQQTMQAISQLAIR
KYQARCQQDALRDSASSCSSAPICAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNIIEGAAFAQPAHLRQNPQDLEPGQRLHLFRQHPGHALYRLPEAHPQRRLRNFA
SQLPHGNPFFHSPELSQLDLTTMHYMPYRPVGSMATCSHQPSLAQGLGNEQHRKSPACGQ
MPSSHRTCPLQHQARCLGFRTAVVPRQHHAAPLRRGTSHGRQQNSSGSGESYLTLHSGYL
ADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPWVYCSSTDNGQ
EQLQSPGEPRLRSLDLKETGSSALAKSQILTHVHYHHHRHHHYRKDPECPSGRSGQEPSQ
HKPWFSGAVHSARTQKRTEKTRHCKQPLESSPMSQDASLSGQPSCVHQGPDHSKHLSSSA
DGSDFSWVASKQAGTTGPLPFPMLQKHGLQSRHPRRKRKCRPEPALAHLSEDSDMHKDCN
VHIHYGHSPSYCCSPDVQPLLPTAPMPYCSGSQVVWKCLVPPSNLESQQQDKDLSEWEGK
PMYPVDFSGTGTTEGNTSLYLPCQTLQHNQGSKEEIQDVYEHSV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccagctgcagctggctgtcctctggccttggctgctaatggctaca
ctgcaggtcagacttggccttactgggctggcagtggcagcggcagtggagtcagagaga
tcagcagcacagaaggctatcattagggtgatccccttaaaagtggagccaatcacattg
gaaggagtgtttgctgatgttgctgaggttactccagcagaaggaaaactgctgcagttc
cacccgctgtctctgtgtaacaccagtgaggatgagcacaccagctctggatttgtcact
attgtcaaactcgagcgaccggatcgagatctccacccctgtctgtcattggacaacaag
gcgaagctagcaggggagcggggggctcgtgccatcctcttcgacatcacggatgatgaa
agcgctgctgaccagctgaggaaacccagaggcctgagtcagcctgtggttctgatccgg
ggccatgacgctgagcttctgatgggcgttgtgaacaagaatcgagaagcacatgtgaag
attgaggttaaacagcagccagcatggccagactatgatgtgtggattcttctcacagtg
ctgagcactgtcatcgtgatcattctgatttttgttgttcgcaccaagtgtcactggaac
aggactcaggactccttgcagcagcagaccatgcaggcgatcagccagctggccatccgg
aagtaccaggcccggtgccaacaggatgccctaagggattcggccagcagctgcagctca
gcccccatctgtgctatctgtctggaggagttcagtgagggccaggagctgcggattatt
tcctgttcccatgagttccacagagagtgtgtcgacccctggctacagcagcaccacacc
tgcccgctctgcatgttcaatatcattgagggggctgcctttgcccagcctgcgcatttg
aggcagaatccccaggacctggaacccgggcagcggcttcacctcttccggcaacaccca
ggacacgccctgtatcgcctcccagaggcccacccccagaggcggctcagaaactttgct
tcgcagctcccccatggcaaccccttcttccattccccagagctctcccagttggattta
accaccatgcactatatgccatacaggccagtgggctccatggccacatgcagccatcag
ccctctctagcccaaggcctagggaatgagcagcaccgaaaatctccagcatgtgggcag
atgccatcttctcacaggacctgcccacttcagcaccaggcccgttgcctgggattcagg
acggcggtagtaccaagacagcaccatgctgcccctcttcgtcggggaaccagtcatggg
aggcagcagaacagcagtggctcaggggagagctatctcacattgcacagtgggtacctg
gctgatggtccaggcagtgactccagctccggaccctgtcatggctcctccagtgattct
atgttgaattgcacagacgtcagccttcagggcatccatggtagctgctccactttccgc
agctccctgagcagtgactacgatccctgggtgtactgtagctccactgacaatggccag
gagcagctgcagtctccaggggagccaaggctaaggtctttggacttgaaggagaccggc
agctctgcgttagccaagagtcagatactgactcatgtccattatcaccaccacaggcac
catcactacaggaaggacccagagtgtccgtctgggagatcaggccaggaacccagccag
cataagccctggttttcgggggccgtgcacagtgctcggacacaaaagaggactgagaaa
actcgtcactgcaaacagcctcttgaaagcagcccaatgtcccaggatgcatctctgtca
ggacagccctcctgtgtgcatcagggacctgaccactcaaagcacctctcctcttctgca
gatgggtctgacttcagctgggtggccagtaagcaagctggaacaactggtccattgcct
ttcccaatgttacagaaacatggcttacaaagccgtcaccccagaaggaaacggaagtgc
cgcccggagcctgccctggctcacctctcagaggactcagacatgcacaaagactgcaat
gttcacattcactatggccactcccctagctactgctgctccccagacgttcagccactg
ttgccaacagcccctatgccctattgctcaggctctcaggtggtttggaagtgcctagtc
ccgccctccaacttggagtcccagcagcaggacaaggacctatcagaatgggaggggaaa
cccatgtatccagttgatttctcagggacaggcaccacagaaggcaacacgagtctttac
ctcccctgccaaactctgcaacacaatcagggatccaaggaggagatccaagatgtgtac
gaacattctgtttaa
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