Caretta caretta (Loggerhead turtle): 125623964
Help
Entry
125623964 CDS
T09292
Symbol
HNF1B
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125623964 (HNF1B)
Transcription factors [BR:
ccay03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
125623964 (HNF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
APP1_cat
Motif
Other DBs
NCBI-GeneID:
125623964
NCBI-ProteinID:
XP_048680105
LinkDB
All DBs
Position
17:17204037..17281886
Genome browser
AA seq
574 aa
AA seq
DB search
MVSKLSSLQQELLSALLSSGATKEALIQALDDMVPTTSFGVKLENLPLSPGSGTEADSKP
VFHTLTNGHSKGKLSGDEGSEDGDDFDTPQILRELQALNTEEAVEQRAEVDRMISEDPWR
AAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREIL
RQFNQTVQGSGNMTDKSSQDQLLFLFPEFNQQNQGTGQLEDTCSETPSKKMRRNRFKWGP
ASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWF
ANRRKEEAFRQKLAMDAYSTSQPHSMNLLLSHNSPHHTQPSSSPPSKMAGVRYSQQGNNE
VTSSSTISHHGNNAMVTTSQSVLQQVSPAGLDPGHNLLSPDGKMISVSGGGLPPVSTLTN
IHSLPHHNPQQSQNLIMTPLSGVMAIAQSLNTSQAQSVPVINSVAGSLAALQPVQFSQQL
HSPHQQPLMQQSPSHMTQQPFMATVTQLQNSHMYAHKQEPPQYSHTSRFPSAMVVTDTSS
ISTLTNMSSNKQTSHRAVKTSGTGPELVQIRIMH
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccaagctcagctctctgcagcaggaacttctgagcgctcttctcagctccgga
gccaccaaggaggcgttgatccaagccctggacgacatggtgcccaccaccagcttcggg
gtgaagctggaaaacctgcccctgtccccaggcagcgggacggaggcggacagcaagccc
gtcttccacaccctcaccaacggccacagcaagggcaagctgtccggggacgagggctcc
gaggacggggacgacttcgacaccccgcagatcctccgggagttgcaggcgctcaacacg
gaggaggccgtagagcaaagagcggaggtggatcggatgatcagtgaggacccctggcgg
gcggcgaaaatgatcaaaggttacatgcagcagcacaacatcccccagagggaggtggtg
gacgtcacaggcctgaatcagtctcacctctcccagcacctcaacaaggggacacctatg
aaaacgcagaagcgggcagccctctacacctggtacgtccggaagcagagggagattctc
agacaattcaaccagacagtccagggttctggaaatatgacagacaaaagcagtcaggat
cagctgctgtttctctttccagagttcaatcagcagaaccagggcacaggccagctcgag
gacacctgctctgaaacccccagcaagaagatgcgacggaatcgattcaaatgggggcct
gcctcgcagcaaatcttgtaccaagcctacgaccggcaaaagaaccctagcaaggaggaa
agggaagccttagtggaggaatgtaacagggcggaatgtctccagcgaggagtgtccccc
tccaaagcgcacgggctgggatccaacttggtgacggaggttcgcgtctacaactggttc
gcaaaccgacggaaagaggaggctttccgccagaagctggccatggatgcctacagcacg
agccagccacacagcatgaacctcctgctgtcccacaactcaccccatcacacgcagccc
agctcttcgccccccagcaaaatggcaggagtccgatacagccagcaggggaacaatgag
gtcacttcctcttcgacaatcagtcaccacggcaacaacgccatggtgaccaccagccag
tccgtcctacagcaggtttctccagcagggttggacccgggccacaatttactctcacct
gatggtaaaatgatctctgtttcgggaggtgggctgccccctgtaagtaccctgaccaat
atccacagcttgccccatcacaacccacaacagtcccagaacctcatcatgacaccgctc
tctggcgtcatggcaatcgcgcaaagtctaaatacttcccaggcacagagcgtccctgtt
atcaacagtgttgccggaagtctggcagctttacaacccgtccagttttcccagcagcta
cacagtcctcatcaacagccactcatgcagcagtcgcccagccatatgacacagcagcct
tttatggccacagtgacgcagctgcagaattcacacatgtatgcacacaagcaggagcct
ccccagtattcccacacttcccggtttccatcagccatggtggtcacagataccagcagc
atcagtacattaaccaatatgtcttccaataaacagacatcccatcgtgccgtaaagaca
agtgggactggtccggaacttgtgcaaatccgcatcatgcactaa
DBGET
integrated database retrieval system
