Caretta caretta (Loggerhead turtle): 125624060
Help
Entry
125624060 CDS
T09292
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125624060 (SUPT6H)
03036 Chromosome and associated proteins [BR:
ccay03036
]
125624060 (SUPT6H)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
125624060 (SUPT6H)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
125624060 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
125624060
NCBI-ProteinID:
XP_048680325
LinkDB
All DBs
Position
17:complement(23154178..23195262)
Genome browser
AA seq
1722 aa
AA seq
DB search
MSDFVESEAEESEEEYNDDGEVVPRVNKKFVEEEDDEEEEEENLDDQDEQGNLKGFINDD
DDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRK
MSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVDAPIAPPEEEEEDEEDESDID
DFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEYEY
EDEEAEGEIRVRPKKTAKKRISRRSIFEMYEPSELESSHLTDQDNEIRVTDMPERFQLRS
IPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKEA
LNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQA
YQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAA
KASRKKHKRMREDGEEAEGEGEDAEDEEQKGPELKQASRRDMYTICQTAGLDGLAKKFGL
TPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPL
VRQVLRQTFQERAKLNIAPTKKGKKDVDEAHYAYSCKYLKNKPVKELRDDQFLKICLAEE
EGLLSIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFL
YVQMAKELKNKLLVEAKEYVIKACSRKLYNWLKVSPYRPDQQVEEDDDFMDENQGKGIRV
LGVAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEERDKKAQDIETLKKFLL
NKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSRKSEN
EFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYCE
FINRVNEVGVDVNRAIAHPYSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMC
HMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPY
RSPNTEEVFNMLTKETPETFYIGKMITCNVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGM
TVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDAEAADHKQEEDYKRKQQ
RTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHV
DVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLSHKYYQDCSGGDRK
KLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIF
PTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTS
QMFSAIAAVTGQGQNPSATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSY
SYTTPSQPITTPQYHQLQASTTPQSTQSQPSSSSRQRQQPKSNSHAAIDWGKMAEQWLQE
KEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtagagagcgaggctgaggagtcggaggaggaatacaacgatgatggg
gaggttgttccgagagttaacaagaaatttgtggaagaggaagatgatgaagaagaggag
gaggagaatcttgatgatcaagatgagcaggggaacctaaagggattcattaatgatgat
gatgatgaggaagaggaggaggaggaagaagcaagcgactctggtgattcggaggacgat
gttggccacaaaaagagaaaacgcactttcgatgaccgtctggaggatgacgattttgac
ctcattgaagagaatttgggtgtcaaagtcaaaagacaaaaattcaggcgtgtgcgaaaa
atgtcagatgatgaggatgatgaagaggaggattatgggaaggaggaacatgagaaggaa
gccattgctgaagaaatcttccaggatggagaaggggaagaggggggcgaggctgttgat
gctcccatagctcccccagaagaagaggaagaggatgaggaagatgaatctgacatcgac
gacttcattgtggatgatgatgggcaacctctgaagaagccaaagtggcggaagaagctc
cctggctacacggatgctgctttgcaagaggctcaggagatcttcggagtggactttgac
tatgatgaatttgagaagtacaatgagtatgatgaggagctggaggaggaatatgagtac
gaggatgaggaggctgaaggggagatccgtgtccgacccaaaaagactgccaagaagcgc
atcagtcgacgtagcatctttgagatgtacgagcccagtgagctggaaagcagtcacctg
acagaccaggacaatgagatccgcgtgaccgacatgccagagaggttccagctgcgctcc
atccctgtgaagagtgctgaagatgatgaattggaggaagaagctgactggatctacagg
aatgcctttgccacacctaccatctcgctgcaggaaagttctgattacttggaccggggc
caggccagtagcagcttcagccgcaaggggcccagcaccatacagaagattaaagaagcc
ctgaatttcatgagaaatcagcactttgaggtcccattcattgccttctaccgaaaggag
tatgtagagccggagctgcacatcaatgacctctggagggtctggcagtgggatgaaaag
tggacccagctaaaaatccgcaagcagaacctgacccgtctgtttgagaagatgcaggcc
tatcagtacgagcaaatctctgctgatccggacaaacctttggctgatgggataagggcg
cttgataccactgacatggagaggctgaaggacgtgcagtccatggatgagctgaaggat
gtgtataaccatttcttgctgtactacgggcgagacatcccgaagatgcagaatgctgcc
aaagccagccgaaagaagcataaacgaatgcgggaggatggtgaagaggccgaaggggaa
ggagaggatgcagaagatgaggagcagaaggggcccgagctgaagcaggcatcccgcagg
gatatgtacaccatctgtcaaaccgccggactggacggcctggctaagaagtttggtctg
acgcctgagcagtttggagagaatcttcgggacagttaccagcgtcatgagacagagcag
ttcccagcagagccgctggagctggccaaggattacgtgtgtagtcaattcccgacccct
gaggctgtgctggaaggagcccgctacatggtggccttgcagatagcccgagagccactt
gtcaggcaggtcttgagacagactttccaagagagagccaaactcaacattgcaccgacc
aagaagggtaaaaaggatgttgatgaagcccactatgcgtattcctgcaagtacctgaag
aacaagcctgtgaaggagctgcgagatgaccagtttctgaaaatctgcctggctgaggag
gaggggctgctgagcatcgacatcagtattgacatgaaaggcgttgaggggtatggtagt
gaccagacgtattttgaggaaatcaagcagttttattaccgggacgagttcagccaccag
gtgcaggagtggaatcgtcagcgcacaatggccatcgaacgttccctcaaccagttcctc
tacgtgcagatggctaaagagctgaagaacaagctgctggttgaggccaaagaatacgtc
attaaggcttgcagccggaagctgtacaactggctaaaggtgtctccctaccgtccagac
cagcaggtggaggaagacgacgatttcatggatgaaaatcaggggaagggaattcgggtg
ctgggcgttgcattctcctctgccagagaccaccccgtgttctgtgccctggttaatggc
gaaggcgaggttacagacttcctccggctgccacacttcaccaaaagacggaacgcctgg
cgggaggaggagcgggacaagaaggcccaggatatcgaaactctgaaaaaattccttctg
aacaagaagcctcatgtggtgacaattgcaggagagaacagggatgcccagatgttgatg
gaggacgtcaagcggattgtgcatgaactggatcaggggcagcagctgtcttccattggg
gtggagctagtggacaatgagctggccattctctacatgaacagcaggaagtcagagaat
gagttccgggattacccccctgtgctgcgccaagctgtctccctggctcgccgcattcag
gaccccctgatcgagtttgctcaggtctgcagctctgatgaggatatcctgtgtctgaag
cttcaccctctgcaggaacatgtggtgaaggaggagctgctgaatgccctctattgcgag
ttcataaaccgtgtgaatgaggtgggagtggacgtaaatcgggcaattgctcacccttac
agccaggccctgctacagtatgtttgtggcctggggccacgcaaagggactcacctgctc
aagatcctgaaacaaaacaacacaaggctggagaaccggactcagctagttaccatgtgt
cacatgggacccaaggtcttcattaattgtgctggtttcatcaaaattgacacagcatcg
ctgggtgacagcacggattcctacatcgaggtcctagatgggtccagggtccaccctgaa
acctacgaatgggcaagaaaaatggcagtggatgccctagagtatgatgaatcagcagag
gatgccaatccagctggcgctctagaggagatcctggaaaacccagagcgtctgaaagac
ctggatcttgatgcctttgctgaagagctggagagacagggttacggtgacaaacacatc
acgctgtacgacatccgagctgagctgagctgtagatacaaggatctgagaaccccgtac
cgttctcctaacacagaggaggtcttcaatatgctgaccaaagaaacaccagagaccttc
tacataggtaaaatgatcacctgcaacgtgactgggatagcccataggaggccccaaggc
gaaagctacgatcaggccatacggaatgatgagactggcctctggcaatgtcccttctgt
cagcaggataacttcccggagctcagtgaggtttggaatcactttgacagtggctcctgc
cctggccaggctattggggtgaagacacggctggacaatggggtcactggctttatacca
accaagtttctcagcgacaaggtggttaagcggccagaagaaagggtgaaggtaggaatg
actgttcactgtaggatcatgaagatagacattgagaagttcagtgcagacctgacctgc
aggacgtcagacctgatggataagaacaatgaatggaagctgcccaaagacacttactat
gactttgatgctgaggcagcagatcacaagcaggaagaagactacaagaggaaacagcag
cgcacaacatacatcaagagggtgatcgctcacccgtcattccataatatcagcttcaag
caagccgagaagatgatggagaccatggaccaaggggacgtgatcatccggccaagcagc
aagggggagaaccacctgactgtcacctggaaggtgaacgatgggatttaccagcatgtg
gatgtccgagaggagggcaaggagaacgccttcagtttgggctccaccctttggattaac
acagaggaattcgaggacctggatgaaatcgtcgctcgctatgtccaaccaatggcgtct
tttgctagagacctgctgagtcacaaatactaccaagactgcagtggtggagacaggaag
aaactggaagaacttctaataaagaccaagaaggagaagccaacctttattccttacttt
atctgtgcgtgtaaagagctacctggcaaattccttctcggataccagcctcgagggaaa
ccgaggatagagtatgtgacggtaacaccagagggattccggtaccggggacagatcttc
cctacagtgaatgggctcttccggtggtttaaggatcattatcaggacccagtgccaggt
atcaccccgagcagcagcagcaggacccggacccccgcctccatcaatgctactcctgct
aatattaacctagctgatctgacccgagccgtgaacgcgctgccacagaacatgacctca
cagatgttcagtgccatcgccgcagtgacgggccaagggcagaaccccagtgccacgcct
gcacagtgggcatccagccagtatggctacggaggcagcggagggggcagcagcgcatat
cacgtctttacaactccagcacagcagccagtggccacccctctgatgacccccagctac
tcctacacaacccccagccagccaattacaacccctcagtatcatcagctccaggccagt
actacaccccagtccacccagtcgcagccatcgtccagttccaggcagaggcagcagccg
aagtccaacagccacgctgcaatcgactgggggaaaatggccgagcagtggctccaggag
aaggaggctgagcggaggaaacagaagcagaggctgacccctcgtccatctcccagcccc
atgatcgagagcacgcccatgtccattgctggggacgccacaccacttctggatgaaatg
gatcgatag
DBGET
integrated database retrieval system
