Caretta caretta (Loggerhead turtle): 125624128
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Entry
125624128 CDS
T09292
Symbol
LRP6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04150
mTOR signaling pathway
ccay04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125624128 (LRP6)
04150 mTOR signaling pathway
125624128 (LRP6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125624128 (LRP6)
Membrane trafficking [BR:
ccay04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125624128 (LRP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
EGF_LRP2
SGL
cEGF
EGF
DUF1547
Motif
Other DBs
NCBI-GeneID:
125624128
NCBI-ProteinID:
XP_048680449
LinkDB
All DBs
Position
1:218790504..218991609
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AA seq
1612 aa
AA seq
DB search
MGPALRSLLLCSFCALLRAAPLLLYANRRDLRLVDAENGKENATVVVGGLEDAAAVDFVF
VRGLIYWSDVSEEAIKRTEFNKTGSIQNVVISGLLSPDGLACDWLGEKLYWTDSETNRIE
VSNLDGSLRKVLFWQELDQPRAIALDPARGFMYWTDWGEVPKIERAGMDGSSRSVIINTD
IYWPNGLTLDYEEWKLYWADAKLNFIHKSNLDGTHRQAVVKGSLPHPFALTLFGDTLYWT
DWNTHSVLACNKYSGEDLREIHSNIFSPMDIHVFSQQRQPNATNPCGSNNGGCSHLCLMS
PIKPSYQCACPTGVKLLENGKNCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIR
HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWT
DTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMIGYMYWTDWGEIPKIERAALDGSD
RVVLVNTSLGWPNGLALDYAESKIYWGDAKTDKIEVMNADGSSRRVLVEDKLPHIFGFTL
LGDYIYWTDWQRRSIERVHKRTAEREIIIDQLPDLMGLKATNVHQIIGANPCAEDNGGCS
HLCLYRPQGPRCACPIGLELISDMRTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTG
VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLY
WADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG
SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLDREVIADDLPHPFGLTQ
YQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQAGWNECASSNGHC
SHLCLAVPVGGFVCGCPAHYSLNSDNRTCSAPTTFLLFSQKNAINRMVIDEQQSPDIILP
IHSLRNVRAIDYDPLDKQLYWIDSRQNIIRKAQEDGSQSLTVVTSPVPNQNLDMQPYDLS
IDIYSRYIYWTCEATNVINVTRLDGRPMGVVLKGEDDRPRAIVVNPEKGYMYFTNLQERS
PKIERAALDGTEREILFFSGLSKPIALALDSQLSKLFWADSELRRIESSDLSGANRIVLE
DSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRMKVQARIAQLSDIHAVKELNIQ
EYRQHPCSQDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPQQFTCFTGE
IDCIPVAWRCDGFTECEDHSDEKNCPVCSDSQFQCESGQCIDSVFRCNGEANCQDNSDEK
NCEVLCLTDQFRCASGQCIGKNKKCDHNLDCSDSSDEQGCYTTEEPAPQANNTIGSIIGV
ILTVFVVGAMYFICQRVLCPRMKGDGETMTNDYVVHGPASVPLGYVPHPSSLSGSLPGMS
RGKSVISSLSIMAGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATERSHYTM
EFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYAPSRRVTTAVTKGYTSDLN
YDSEPVPPPPTPRSQYLSAEENYESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggggcccgcgctgcggagcctgcttctctgcagtttctgcgccctgctgcgagctgcc
ccgctgctgctgtatgcaaaccgacgtgatctgcgattggtggatgctgaaaatgggaaa
gagaatgctacagttgtagtgggtggtttggaagatgcagccgcagtggactttgtgttt
gtccgcgggttgatatactggagtgatgtaagcgaagaagccattaaacgaacagaattt
aacaaaactgggagtatacagaatgtggtcatttctgggcttttgtcacctgacgggctg
gcatgcgattggctgggagagaaactatactggacagattctgaaaccaatcggattgaa
gtttccaatttagacggatctttgagaaaagttttattttggcaagaattggatcagccc
agagcaatagccttagatcctgcaagagggttcatgtattggacagattggggagaagtg
ccaaagatagaacgtgctgggatggatggttcaagccgctccgttataataaacacagat
atttactggccaaatggattgactttggattatgaggaatggaagctttattgggcagat
gctaaactgaacttcatccacaaatcaaacctggatggaactcatcggcaagcagtggtt
aaaggttctcttccacatccttttgctttgactttgtttggggacacattgtactggact
gactggaacactcattctgttttggcttgcaacaagtattctggggaggacctgcgtgaa
atacattccaacattttctctcccatggatatccatgttttcagtcaacagaggcagcca
aatgctacaaacccatgtggaagtaataatggtggctgctcccacttgtgtttgatgtct
cctatcaagccttcttatcagtgtgcttgtcccactggtgtgaaactccttgagaatgga
aagaactgcaaagatggagccaccgaattactgctcctagcccgcaggacggacttgagg
cgcatttccttggataccccggattttacagacattgtcttgcagctagaggacatccgt
catgccattgctattgactatgatcctgtggaaggatacatctattggactgatgatgag
gtgagggccattcgccgctctttcatagatggatcaggtagtcagttcgttgtcacggca
cagattgcgcatcccgatggcattgctgtggactgggttgcccgaaacctttattggact
gacaccggcactgaccgcatagaagtgacaagacttaacgggactatgagaaagatcttg
atatcagaagacttggaagaaccaagagcaatcgtattggatcccatgattggatacatg
tattggactgactggggagaaattccaaagattgagagggctgcattagatgggtcagac
agagttgtgctggtgaatacttcgcttggctggccaaatggactggccctggattatgca
gaaagcaaaatatattggggagatgcgaaaacagacaaaattgaggtcatgaatgcagat
ggcagtagcaggagagttctggtggaggacaagctgcctcacatctttggattcactttg
ctgggagattacatctattggaccgactggcaaaggcgtagcattgagcgagtgcataag
cgtacagcagaaagagaaatcatcatagaccaactgcctgacctaatgggcctgaaagct
actaatgtccatcagatcattggtgcaaacccttgtgcagaggacaatggtggttgcagc
cacctctgtctgtacagacctcagggccctcgctgcgcctgtcccataggcttagagctc
atcagtgatatgaggacttgcattgtcccagaagctttcctgctcttttctcggagagca
gatatcaggcgaatctctttggaaaccaacaacaacaatgttgccatcccacttacggga
gtcaaagaagcttctgctctggattttgacgtgacagacaatcggatttactggacagat
atctcactgaagactatcagcagggcatttatgaacggcagtgcactcgaacatgtggtg
gagtttggcttggattacccagaaggcatggcagtagactggctagggaagaacctgtat
tgggctgataccggaacaaatcgtattgaagtgtcaaagctggatggacaacatcgtcaa
gtattggtgtggaaggatctggacagcccccgggcattggcattagaccctgctgaaggg
tttatgtactggactgagtggggtgggaagcccaagattgaccgagctgccatggatgga
agtgaacgtactactttggtaccaaacgtggggcgagctaatgggctaacaattgattat
gcgaaaagaagactttactggactgatctagataccaacttaatagaatcttcaaatatg
ctaggccttgaccgtgaagttatagccgatgacttgcctcacccgttcggcttgactcaa
taccaggattacatctattggacagattggagccggcgcagcattgagcgagccaacaag
accagtggccagaaccggaccatcatccaaggccatttggattatgtgatggatatcctg
gtcttccattcctcaagacaggcaggctggaatgaatgtgcatctagcaatgggcactgc
tcccatctctgcttggcagtgccagttggtggttttgtgtgtggatgcccagctcactat
tccttgaattctgacaacaggacctgtagtgctcctacaactttcctgttgttcagtcag
aagaacgcaattaatcgcatggtgatagatgagcaacagagtccagatatcatactccct
atccacagtctcaggaatgtccgggccatcgattatgaccccctagataagcaactttac
tggattgactctcggcagaacattatccggaaggcacaagaagatggcagccagagcctt
actgtggtgacgagtccggttcccaatcagaacctagacatgcagccctatgatctgagc
attgacatctacagccgctatatctactggacttgtgaagccactaatgtgattaatgtg
acacgcttggatgggagaccgatgggcgtggtgctgaaaggagaagacgacaggccccgg
gccattgtggtgaacccagagaaagggtacatgtatttcactaatctgcaggaaaggtca
cccaaaatcgagagggcagcactggatggaactgaacgggagatcctctttttcagtggc
ttgagtaaacctatagccctggcccttgacagccagctgagcaagttattctgggctgat
tcagagctccggagaattgagagcagtgacctttcaggggcaaatcgaatagttttagaa
gactccaatatcttgcaacccgttgggctgacagtatttgaaaactggctgtactggatt
gacaagcaacaacaaatgattgaaaaaatcgacatgactggtcgagaaggacgtatgaaa
gtccaggctcgtattgcacagctcagtgacatacatgcagttaaagaactaaacatccag
gaatacagacagcatccttgttctcaagataatggcgggtgttcgcacatttgtattgtg
aagggtgacggtacaacccggtgttcttgtccagtgcaccttgttctgcttcaggatgaa
ctatcctgtggagaacccccaacatgctcccctcagcaattcacctgtttcacgggggag
attgactgcatcccagtggcctggcgctgtgatggattcactgaatgcgaagaccatagt
gatgaaaagaactgccctgtctgttcagactcccagttccagtgtgaaagcggacaatgc
atagacagcgttttccggtgcaatggagaggcaaattgccaggacaactctgatgaaaag
aactgtgaagtgctttgtttaaccgatcagttccgctgcgccagtggccagtgcattggg
aaaaacaagaaatgtgatcacaacttggactgcagtgacagctccgatgagcaaggatgc
tacacaacagaggagccagcaccacaagccaacaataccataggctcgatcattggagtg
atcctcactgtttttgtggttggagcaatgtactttatctgccagagggtgctgtgccca
cgcatgaagggggatggggaaacaatgactaatgactatgtggtgcacggaccagcctcc
gtaccacttggttatgtgcctcacccaagctctctgtcagggtctctcccaggaatgtct
cgtggtaaatctgtgatcagctccctcagcattatggccggaagtagtggccctccctac
gacagagcccatgtcacgggggcatcctccagtagttcttcaagcaccaagggcacttac
ttccctccaattttgaaccctccgccatcaccagctactgaacgctcacattacaccatg
gaatttggttattcttcaaacagtccttccactcatagatcctacagctacaggccatac
agctaccggcattttgcacctccaaccacgccatgcagcacagacgtttgtgacagcgac
tacgcccccagccggcgggtcacaacagcagtgactaagggctacaccagtgatttgaac
tatgattccgagcccgtgccccctccaccgacgccaaggagccagtacctctcggcagag
gagaactatgaaagctgtccgccctccccgtacacagaacggagctattcccatcacctc
tacccgccgcctccatccccctgcacggactcctcatga
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