Caretta caretta (Loggerhead turtle): 125624227
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Entry
125624227 CDS
T09292
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay00310
Lysine degradation
ccay01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125624227 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125624227 (PRDM2)
03036 Chromosome and associated proteins [BR:
ccay03036
]
125624227 (PRDM2)
Enzymes [BR:
ccay01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
125624227 (PRDM2)
Transcription factors [BR:
ccay03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125624227 (PRDM2)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125624227 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2HE
zf-C2H2_ZNF462_1st
zf-H2C2_2
zf-C2H2_11
zf-MYST
EVE
zf-C2HC_2
PyrI_C
Motif
Other DBs
NCBI-GeneID:
125624227
NCBI-ProteinID:
XP_048680617
LinkDB
All DBs
Position
18:complement(10296952..10418018)
Genome browser
AA seq
1728 aa
AA seq
DB search
MNQNTTESAGAAETLADVPEHVLKGLPEEVRLFPSAVDKTRLGVWATKSILKGKKFGPFV
GDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPRKGNWLRYVNWALSGKEQNLFPLEINR
TIYYKTLKPIEPGDELLVWYNGEDNPEIAAAIEEERATHRSKKNSPKAKKGKKKECKNKG
RKAIDTKQRKTDLDFTSTDMRESKKDYKEEDEKPSVSAVLSLEQTAVIQEMVNQDVLPKL
MIPSPTSEPRTMSEDKPGAITCGSDDLEEEEEEEDEEEEEDEEEEEDEEEDANLPEESSG
KEPTAVCEEKLDSMEEQNSISEESPENSPKKTPVVKIPKAKGVSNGDLQETFMFPCQHCE
RKFTTKQGLERHMHIHISSVNHAFKCRYCGKAFGTQINRRRHERRHEAGPKRKPFLTLTS
APQSDVADGRTFADDGLKDEVNVSNLVQDFTVLDSEKVSQEMSNSTFVEENKEPKELHPC
KYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGFILEEPQLQIEQAQPAQSVYIASTEL
EEDGEADDIYIMDISSNISENLNYYIDGKIQSNSSTSNCDVIEMESNPADLYGINCLLSP
VTVEISQNLKSTQTHITDLPKEPSSGGSNESKKRRTASPPLLPKIKTEIDPEPITPSCSL
SLPLSISTAESLPFHKEKSVYLSSKLKQLLQTQDSNKITPAAAAATEIPKLGPSATSSPI
LPSVSSRFKRRTSSPPSSPQHSPALRDFSKQGDGKNMWNDTVIGSKMPKLESHSNSPAWS
LCGREERQTMSPLCFEDYKISKEWTTTPTFGSVCNQQPLDLSSGVKQRSDVKSKTQVPWE
SVLDLSVNKKPYSDTEVKEYKENNSVQPACSGIKKKKPTTCMLQKVLLNEYNGTDVATES
TPDLTLNRSPSPCKSAVPQPETEVDRGLSAPTVESPSHSSSASPLPQTSAISSSCQLPPL
LTPTNPSSPPPCPPLLTLAMPPPPLLPTIPLPLPDASASVTPSPCPSPLCNTATQSPLPV
LSPTVSPSPSPVPSVELFTTASPGPPNLSSSSSSSSSSSSSSSFSSSSSSSSSSSSSSSS
SSSSSFSSPSPPPLSVVSSVVSPADNLESTLPIIAFKQEEMESEHLKPRGDPETSSEADV
VQETFNKSFVCNVCESPFLSIKDLTKHLSVHAEEWPFKCEFCVQLFREKTDLSEHRFLLH
GVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKECTHHEFESGTLRPQNFTDPSKANVEHM
QSLPEVSLEPSKEEEEDLNDSSEELYTTIKIMASGVKSKDPDVRLGLNQHYPSFKPPPFQ
YHHRNPMGIGATATNFTTHNIPQTFTTAIRCTKCGKSVDNMPELHKHILACASASDKKRY
TPKKNPVPLKQTVQPKNGMVIIAGTGKNTFRRMGQPKRLNFNVEISKMSSNKLKLSALKK
KNQLVQKAILQKNKSAQQKADLKNSVSESDSHICPYCNREFTYIGSLNKHASYSCPKKPI
SPSSKKNASKKSGSFSSSASGDKGNNQRRRTADAEIKMQSMQAHLGKTRARTSGPVQIQL
PTASFKSKQNVKFIPPIRSKKPSPSSVLRNSSPVRVAKMTHIEGKKTKVVAKNNSGISSK
TSRKLHVRIQKNKAVLPSKSAVANKKKADRFSVKSRERVGGPITRSLQQAANADTIENKR
EESSTKQELKDFSYRLRTASRCPPSSSQNTSTRQCKRSSCTTAHFFKE
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacacaactgaatctgcaggagcagctgagaccttggccgatgtacctgaa
catgtgcttaaaggacttcctgaggaagtgaggcttttcccatctgctgttgacaagaca
cggcttggtgtctgggcaacaaagtcaattttaaaaggcaaaaaattcggaccatttgtt
ggtgacaagaaaaaaagatcccaagttaagagcaatgtttacatgtgggaggtatattac
ccaaacttgggatggatgtgtgttgatgcaactgatccaaggaaaggaaattggctgcga
tatgtgaactgggctctttcaggaaaggagcaaaatctattccctttggagatcaacagg
accatttactacaaaaccttaaagccaattgagcccggcgacgagctgctggtctggtac
aatggggaagacaacccagagatagcagctgctattgaggaagagcgagccacccaccgg
agcaagaagaactccccgaaagccaagaaagggaagaaaaaggagtgtaaaaacaaagga
aggaaggcaatagatacaaagcagagaaagactgatttggattttacttccacagatatg
agggagtctaaaaaagactataaagaggaagatgaaaagccatctgtttctgctgtgctg
tcactggaacaaacagctgtgattcaggagatggtaaatcaagatgttcttccaaaacta
atgatcccaagtcctaccagtgagccacgaacaatgtctgaagacaaaccaggagcaata
acttgtggatcagatgatttggaggaggaggaggaggaggaagatgaggaggaggaggaa
gatgaggaggaggaggaagatgaggaggaggatgctaatttacctgaagaaagttctgga
aaagagcctacagcggtgtgtgaagaaaagctagactctatggaggaacaaaacagcata
tcggaagaatctccagagaactccccgaagaaaacacctgttgtaaaaattcctaaagca
aaaggtgtatctaatggtgacctccaggaaacatttatgtttccctgtcagcattgtgag
aggaagtttacaacaaagcaaggacttgaacgccacatgcatattcatatatctagtgtc
aatcatgctttcaaatgccgatactgtgggaaagcctttggcactcaaattaaccggcga
aggcatgaacggcgtcatgaagcagggccaaaaaggaaaccgttcttaacactaacttcg
gccccgcagtctgatgttgctgatggacggacatttgcagatgatggtcttaaagatgaa
gtcaacgtttccaatctggtgcaagacttcacagtcttggattctgagaaggtctcccaa
gaaatgtcaaattctacctttgttgaggagaacaaggaacccaaagaattgcatccttgc
aaatattgtaaaaaagtttttggaactcatactaacatgcgtaggcaccagcgtagggtt
catgagcgtcatcttattcccaaaggtgtcaggagaaaaggattcattcttgaggaacca
caacttcaaattgagcaggcccaaccagcccagagcgtgtatatagcaagtacagaatta
gaagaggatggtgaagcagatgacatatatattatggatatttctagcaatatctcagaa
aatttaaattactatattgatggtaaaattcagtccaacagtagcactagcaattgtgat
gtgattgagatggaatccaatcctgcagacctgtatggaataaattgtttacttagtcca
gtcacagtggaaatttctcaaaatttaaagtctacacaaacacacatcactgatcttcct
aaggagccttctagcggtggaagcaatgaatccaaaaagaggaggactgccagccctcct
cttttacctaaaataaaaactgaaatagatccagaacctataactccttcatgttcgtta
agtcttcctcttagcatttcaacagctgagagcttaccttttcataaagaaaaaagtgtt
tatttgtcgtccaagttaaaacaacttcttcagacacaagatagtaataagataactcca
gcagcagcagcagcaactgaaatccctaaattaggtccttctgctacatcttcacccatt
ttgccttcagtatctagtaggtttaaaaggagaaccagctctcctcccagttctccacag
cacagtcctgcgcttcgagacttcagcaaacaaggtgatggaaaaaacatgtggaatgat
acagttataggttcaaagatgccaaaattagaaagtcacagcaactcacctgcatggagc
ttatgtgggagggaggaaagacagactatgagtcctctgtgctttgaagactataaaata
tctaaggaatggacaacaactccaacttttggtagtgtgtgcaaccagcagccactggat
ttatctagtggtgtaaaacaaaggtctgatgtcaaaagcaagactcaggttccttgggaa
tcagtgttggatctaagtgtgaataagaagccatatagtgacactgaagttaaggaatac
aaagaaaataattcagtgcagccagcatgtagtggtattaaaaagaagaaaccaaccaca
tgcatgttacaaaaagttctgctgaatgaatataacggaacggatgtagctactgaaagc
acaccagatttgactttgaatagaagcccaagtccatgtaaatcagcagtaccccagcca
gaaactgaagttgatcgtggtctgtcagcacctactgttgagtccccttctcatagttcc
tctgcttcccctttgcctcaaacatctgctatatcctcctcatgtcagttgccccctctt
ctaacgccaacaaatccttcctccccaccaccctgtcctcctctattaacacttgctatg
ccaccccctccactccttcctactattcctttaccacttccagatgcctctgccagtgtc
actcccagtccgtgcccatcaccactctgtaacactgctacacagtccccacttccagtc
ctttcacctacagtatctccttctccatcccctgttccttctgttgaactttttactact
gcatcacctggtcctccaaacctctcctcctcctcctcgtcctcatcgtcatcctcatct
tcctcttctttctcctcgtcgtcgtcctcgtcctcgtcgtcctcctcctcctcttcttcc
tcttcctcttcctctttctcatctccttctcctcctcctctttcagtagtttcttcagtt
gtttcccctgctgataatctggaaagtactctccccataatagcttttaaacaagaggaa
atggaaagtgagcacctgaagccaagaggcgatccagagacttcaagtgaagcagatgta
gttcaggaaacgttcaataaaagctttgtgtgcaatgtctgtgaatcaccttttctttct
attaaagacctaactaagcatttatctgttcatgctgaagaatggcccttcaaatgtgaa
ttctgcgtacagctatttagagagaaaactgacttgtcagaacatcgctttttgcttcat
ggagtaggaaatatctttgtatgctcagtctgtaaaaaggaatttgcctttttgtgcaat
ttgcaacaacatcagcgagatctccatccagacaaagaatgcacacatcatgagtttgaa
agtgggactctaagaccccagaattttacagatcccagtaaggcaaatgtagaacatatg
caaagcctaccagaagtttccttagaaccctcaaaagaagaggaggaagatctaaatgac
tcctctgaagagctttatactaccataaaaataatggcttcgggagtaaagtcaaaagat
ccagatgttcgtttgggcctcaatcaacactatccgagctttaaaccacctccatttcag
tatcaccaccgaaatcctatgggtattggagccactgctacaaatttcactacccataat
attccacagacctttactactgccattcgttgtacaaaatgtgggaaaagcgttgataac
atgcctgaattacacaaacacatcttggcatgtgcctctgccagtgacaaaaagagatac
acacccaaaaaaaatccagtaccactgaagcagactgtgcagcctaaaaatggcatggtc
attatagctggcactggaaaaaataccttcagacgaatgggacaacctaaaagacttaat
ttcaatgttgagattagcaaaatgtcttctaataagctaaaactaagtgcattgaagaag
aaaaatcagcttgtccagaaagccatcttgcaaaaaaataaatctgcacagcagaaggca
gacttgaaaaacagtgtatcggagtcagactctcacatctgcccctactgtaatagagaa
ttcacttacattggaagtttgaacaaacatgcatcttacagctgtcccaaaaaacccatc
tccccttcctctaaaaaaaatgcatccaaaaaaagtgggagcttctcatcatctgcaagt
ggcgataaaggcaacaaccagcgcagacggacggcagatgcggagatcaaaatgcagagt
atgcaggctcacttgggcaagacgagagcacgaacctcaggacctgtgcagattcagctg
cctactgcatccttcaaatcaaagcaaaatgtaaaattcatacctccaattagatccaaa
aagccaagtccctcttcagtgttaaggaactccagccctgtaagagtggccaaaatgact
cacattgagggaaaaaaaactaaagtggtggccaagaataattctggaatctcaagcaaa
acatcccggaaactgcatgtcagaatacaaaagaataaagctgttttgccaagtaagtct
gccgtggcaaacaagaaaaaggcagataggttcagtgtaaaatctagagagagggttgga
ggacctatcactcggagcttacagcaggcagctaatgcagacacaatagaaaacaagaga
gaagagagcagtacaaaacaagaactaaaagacttcagttacagactccgcacggcctct
agatgtcccccctcctcttctcagaacaccagcaccaggcaatgcaagagatccagctgc
acgacggcccacttcttcaaggaatag
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integrated database retrieval system
