Caretta caretta (Loggerhead turtle): 125624498
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Entry
125624498 CDS
T09292
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125624498 (CHD5)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125624498 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
125624498
NCBI-ProteinID:
XP_048681202
LinkDB
All DBs
Position
18:complement(21581126..21663755)
Genome browser
AA seq
1993 aa
AA seq
DB search
MRGPAGAGAEPRGAMENEEELSEEEDGVLEGLEEFYPEEQVTAQKKKKSKKLKENKTSKV
KRRKKEGSNDEISENEEELEEKSESEGSDYSPNKKKKKKLKEKKEKKAKRKKKDEEEDDN
EEGGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSK
MMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPQLSVSPQQSALPMAIRKAK
TKEGKGPGVRKKIKGSKDGKKKGKGKKMAGVKFRFGGIANKRKKGSSSEEEEREESDFDS
ASINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPR
AYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEDEEGGEEEEDDHMEFCRVCKD
GGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWVWREPPAPF
LSGLPPPELELSVPPSKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQR
KNDMDEPPAFDYGSGDEDGKSEKRKNKDPQYVKMEEKYYRYGIKPEWMMIHRILNHSFDK
KGDVHYLIKWKDLPYDQCTWEIDDIDIPYYENLKQIYWNHRELMLGDDIQPPKRLNKKGR
KLKEEKLEKPPETPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILA
DEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK
ESRAVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACL
VVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGF
LEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFIL
TRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSG
KLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAID
RFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVM
IYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD
VEGMMSQGQRITMPDPMTPFPEAPSSKGGAVTPSMKKKHGGTPPGDNKDVEDSSVIHYDD
AAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDY
WEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDE
DEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRW
GMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQH
VLTRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGPEGKKSSEVVSSDPNTPVPASPAHMQ
TGPVAQPDKTEIQLGLQEEKEQLEPKPKKPAESQGPASAEKAENEENQESSRNEEKPRDE
KQEESAKAELSPERLPVRDEAIQAKEKPLEKSELNACQGKGEDKEFKPAEDTKVEEKEQS
ETQQNGEKEEEEDGKKEDKNMSFRFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHR
RHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQ
ALVIEEQLRRAAYLNMSQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLH
KVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRGGDPTVQQGSFA
SSQLYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTATPNGPPSSHPDKKVAESLKDGAALE
RKGKLGDIICIED
NT seq
5982 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggccggcgggggccggggccgagccgcggggcgcgatggagaacgaggaggag
ctgtcagaagaagaggatggagtgctggaagggctggaggaattttatccagaggagcag
gtgactgcgcagaagaaaaagaaatccaaaaagctgaaagaaaacaagacatccaaagtc
aagagaaggaagaaagaggggagtaatgatgaaatatctgaaaatgaagaggaactggag
gagaaatctgagagcgaagggagtgactattcgcccaacaaaaagaagaagaagaagctc
aaagaaaagaaagagaaaaaagccaagcgcaagaagaaagatgaagaggaggatgataat
gaggaaggaggtttaaaggagcccaagagctcagcgcagctaatggaggagtggggcctg
gatgatgtggattatattttctcagaagaagattaccatactctgactaattacaaggct
ttcagtcagtttctcaggcctctcattgccaagaagaatcccaaaatccccatgtccaag
atgatgacagtgcttggtgccaaatggcgagaattcagcgccaacaacccgttcaaaggc
agctcggccgcggcagctgcagctgcagtggcagcagccgtggaaacagtcaccattgca
cctcagctttctgtcagccctcagcagtctgctctgcccatggccatcaggaaagcgaaa
accaaggagggcaaaggtccaggagtgcggaagaaaatcaagggctccaaagatgggaag
aaaaaggggaaggggaaaaagatggcgggcgtgaaattccggtttggaggaatcgccaac
aaaaggaaaaaaggctcatcaagtgaagaggaggagcgggaggagtcggacttcgacagc
gccagcatcaacagctcttcggtgcgctccgaatgctcggcgggcttggggaagagaggg
aagaggaggagaaagaaaaagaggattgaagaaggggatggatacgagaccgaccaccag
gactactgtgaagtctgccagcagggaggggagattatcctatgcgacacttgtcctcgc
gcctatcacctcgtctgcctggatcctgagctggagaaagcaccggagggcaagtggagc
tgcccgcactgtgagaaggaagggatccagtgggagccgaaggaagaggaggaggaggac
gaggaaggaggcgaagaggaggaggatgaccacatggagttttgccgtgtgtgtaaggat
ggcggggagctgctgtgctgtgacacctgcccgtcttcctatcacctgcactgtctgaac
ccgcctctgccggaaataccaaacggtgaatggctctgcccgcgctgtacatgccctccc
ttaaaaggcaaagtccaacgcatcctgcactgggtctggcgagagcctcctgcccccttc
ctgtctgggctccctccgcctgagctggagctgtccgtccctccatcaaagcccctggag
gggatcccggagcgggagttctttgtgaagtgggcaggactctcctactggcattgctcc
tgggtcaaggagctgcagctggagctgtaccacaccgtgatgtatcgcaactaccaaaga
aagaacgacatggatgaacccccggcctttgactatggctctggggatgaagatggcaaa
agcgagaagcggaagaacaaagacccgcagtacgtcaagatggaggagaagtactatcgc
tacggcatcaaacctgagtggatgatgattcaccgaatcctgaaccacagctttgataaa
aagggagatgtccactacctgatcaagtggaaagatttaccctacgaccagtgtacctgg
gagattgacgacatagacatcccgtactacgaaaacctgaaacagatttactggaatcac
agggagttgatgttgggggatgatatccaaccgccaaagaggctgaacaagaaagggaga
aaactgaaggaagaaaaactagaaaaacctccagaaactccaattgttgatcctacagtt
aaatttgacaagcagccatggtatattgatgcaacaggaggcaccttacatccttaccag
ctagagggactgaactggctgaggttttcctgggcccagggaaccgatacgatccttgct
gatgagatggggcttgggaagacggtgcagaccattgtgttcctgtactccctgtacaaa
gagggccactcgaaagggccgtatctggttagtgcccctctgtccactattatcaactgg
gagcgagaatttgagatgtgggcacctgacttctatgtggtgacctacacaggggataag
gaaagccgggctgtgatccgagaaaatgagttctcctttgaagacaatgccatccggagc
gggaagaaggttttccgaatgaaaaaagaagctcagattaaattccatgtcctgctcaca
tcctatgagctgatcactattgatcaggctgttttaggctctatagagtgggcgtgtctg
gtggtggatgaagctcacaggctgaagaacaaccaatccaaattctttagggtattaaat
agctacaagattgactacaagctgctgctgaccggaacgccgctccagaacaacttagag
gagctctttcacctgctcaatttcctgaccccggagaggtttaacaacctggaagggttc
ctggaagagtttgctgacatctccaaggaggaccagattaaaaagctccatgacctgttg
ggtccccatatgctccggcggctgaaggccgacgtgttcaagaacatgcctgcaaaaaca
gagctgatagtgagggtggagctcagccagatgcagaagaagtactacaagttcatcttg
acgaggaattttgaagccctgaattccaaaggtggtgggaaccaggtgtcgctgctcaat
atcatgatggatttgaagaagtgctgtaatcacccgtacctcttccctgtggctgctgtg
gaggctccggttttgccaaatggatcctacgatgggaattctttggttaaatcttctggg
aaactgatgctgctgcaaaagatgctgaagaagctgcgagatgggggacacagggtcctg
atcttctcccagatgacgaaaatgctggatttgctggaggatttcctggagtacgagggt
tataaatatgagcggatagatggagggatcacgggaggcctgcgccaagaagccattgac
aggtttaatgctcctggtgctcagcagttctgttttcttctctctactcgagctgggggt
ctgggcataaaccttgcaacggccgacaccgtcattatttatgattctgattggaatccc
cacaatgacatccaggcattcagcagagctcaccgcattggacagaacaagaaggtgatg
atctaccgcttcgtgacgagagcctccgtggaggagcgcatcacccaagtggccaaaagg
aagatgatgctgacccatttggtcgtccgtccagggctgggctctaagtctggttccatg
actaagcaggagctggatgacattctgaagtttgggaccgaggagctcttcaaagatgat
gtggaaggcatgatgtcgcagggccagcggatcaccatgcctgaccctatgacccccttt
cccgaagcaccgtcatccaaagggggcgccgtgactccaagcatgaaaaagaaacatgga
ggcaccccgccaggggacaataaagacgtggaggacagcagtgtgatccactacgacgac
gctgccatctcgaagcttctggatcggaaccaggacgcgactgatgacacagagctgcag
aacatgaacgagtatctcagctcctttaaagtggcccagtatgttgtgcgagaagaggac
ggtgtggaggaggttgagcgagagatcatcaaacaggaggagaacgtggaccccgactac
tgggagaagctgctcaggcaccattatgagcagcagcaggaagatctggccaggaacctt
ggcaaagggaagaggatccgcaaacaggtcaattacaatgatgcctcgcaagaggaccaa
gagtggcaggacgagctctccgataaccagtccgaatactccatcggctccgaggacgaa
gacgaagactttgaagaaagacccgaaggtcagagtggcaggagacagtcacggaggcaa
ctgaagagcgaccgagacaagcctctgccccctctgctggcaagggttggggggaacatt
gaggtgctcggatttaatgcccggcagcgcaaggccttcctgaacgctatcatgcggtgg
ggcatgccgccccaggacgcgttcaactcacactggctggtccgagaccttcgcgggaaa
agcgagaaggagtttagggcttatgtctctttgtttatgagacatttatgtgagcctgga
gcagatggtgctgaaacctttgcggatggcgttccccgagaagggctctcgcgccagcac
gtgttgacgaggataggagttatgtcactagtaaggaagaaggttcaggagtttgaacat
gtcaatgggaagtacagcacccctgatctgatcctggaggggccggaggggaaaaaatcc
agcgaggttgtctcttctgatccaaacacccctgtcccagccagcccagcacacatgcag
actgggccagtggcacagccagacaaaacagaaatacagttggggctccaagaggaaaag
gaacaattggagccaaagcccaagaagccagctgagagccagggtccagcaagtgcagag
aaagccgagaatgaagaaaaccaagagagctccagaaacgaggagaaaccgagagacgag
aaacaggaagagagcgcaaaggctgagctgtcgcccgagcggctgccggtgagagatgag
gcaattcaggcaaaggaaaagccattggaaaagtcagaattaaatgcctgccaaggtaaa
ggggaagacaaagagttcaagccagcagaggataccaaggtggaagagaaggagcagagt
gagactcagcaaaatggtgaaaaagaggaagaggaggatgggaagaaggaggataaaaat
atgagcttcagattcatgttcaacattgctgatggtggctttacagagttgcacacgttg
tggcagaacgaggagagagctgccgtctcctcgggcaagatctacgacatctggcaccgg
agacatgactactggttgctggcgggaattgttacccatggctatgcccgctggcaggac
atccagaacgacccgcgctatgtgattctgaatgagccattcaagtcggagatacacaag
gggaactacctcgagatgaagaacaagttccttgcccgacggttcaagttactggagcag
gccctggtgatagaggagcagttgcgaagggccgcgtacctcaacatgagccaggacccc
aatcacccggccatggcactgaacgcccgtctggctgaagtggagtgccttgccgaaagc
caccagcatctctccaaagagtccctggctgggaacaagcctgccaatgctgtcctgcac
aaagttctgaaccagcttgaggagctgctgagtgacatgaaggcagatgtgacccgcttg
ccctccatgctgtccaggataccaccagtcgctgctcgcctgcagatgtctgaacggagc
atcctgagtcgtctcactaaccgaggaggggaccccacggtccagcagggctccttcgcg
tcctcccagctctacaacaacaactttgggccaaacttccggggtcctggaccaggtggg
attgtcaactacagtcagatgccgctgggaccttacgtgaccgcgacacccaatgggccg
ccctccagccaccccgataaaaaagtagccgagtcactgaaagatggtgcagccttggaa
cgcaaggggaagcttggtgacatcatctgcatcgaagactaa
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integrated database retrieval system
