KEGG   Caretta caretta (Loggerhead turtle): 125624583
Entry
125624583         CDS       T09292                                 
Symbol
TAF12
Name
(RefSeq) transcription initiation factor TFIID subunit 12 isoform X1
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    125624583 (TAF12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccay03021]
    125624583 (TAF12)
   03036 Chromosome and associated proteins [BR:ccay03036]
    125624583 (TAF12)
Transcription machinery [BR:ccay03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     125624583 (TAF12)
   Coactivators
    SAGA/TFTC/STAGA complex
     125624583 (TAF12)
Chromosome and associated proteins [BR:ccay03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     125624583 (TAF12)
    STAGA complex
     125624583 (TAF12)
    TFTC complex
     125624583 (TAF12)
    SAGA complex
     125624583 (TAF12)
    SLIK complex
     125624583 (TAF12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa CENP-T_C TAF4 DUF5827 TAF10
Other DBs
NCBI-GeneID: 125624583
NCBI-ProteinID: XP_048681464
LinkDB
Position
19:12252573..12267502
AA seq 212 aa
MASPFTGPTAVADVIKDLDTQIALVGLGPHNPKKKQDLDKLYDLKTKAQQIMNQFGPSTL
INLSSFSSIKPEPANTPPQSSMANSTAVAKMPGTPSGGGRLSPESNQVLTKKKLQDLVRE
VDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSNTLEVKDVQLHLERQWNMWIP
GFGSEEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 639 nt   +upstreamnt  +downstreamnt
atggcctctccattcactgggcccacagcagttgctgatgtaattaaagatctagacact
cagatagctctggttggtctgggtcctcacaaccccaaaaagaagcaggatcttgacaag
ctgtatgatttaaagactaaagcccagcagattatgaaccagtttggcccatctaccttg
atcaacctatccagtttctcctcgataaagccagaaccagccaacacgccaccacagagc
tccatggcaaacagtaccgctgtggcaaagatgccagggactcctagtggagggggacgc
ctaagtcctgaaagcaaccaggttttaaccaagaagaagttgcaggatctggtgcgagag
gtggatcccaatgagcagctggatgaggatgtggaggagatgctgttgcagattgctgat
gatttcattgagagtgtggtgacagctgcctgccagcttgcccgacatcgcaaatcaaac
actctggaagtgaaggatgtccagctgcatctcgagcgccagtggaacatgtggatccct
ggttttggttctgaagaaatccggccatacaaaaaagcctgcactacagaagctcacaaa
cagagaatggcactgatccgcaaaacaaccaagaaataa

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