Caretta caretta (Loggerhead turtle): 125624617
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Entry
125624617 CDS
T09292
Symbol
COL8A2
Name
(RefSeq) collagen alpha-2(VIII) chain isoform X1
KO
K23455
collagen type VIII alpha
Organism
ccay
Caretta caretta (Loggerhead turtle)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
125624617
NCBI-ProteinID:
XP_048681609
EnsemblRapid:
ENSCECG00000001157
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Position
19:3133739..3208798
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AA seq
718 aa
AA seq
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MGVLEPDPESSFFLPVLKTRGEARMLAEAVSLLLLVAGIRSVSGGGAGGGGYAQVKYMQP
MVKGPLGPPFREGKGQYLDMPPLLPMDLKGEPGPPGKPGPRGPPGPPGYPGKPGTGKPGL
HGQPGPAGPPGFSGVGKPGIPGLPGKAGMKGMPGLKGEPGMRGEQGQRGLPGPPGLPGPA
GISINGKPGMQGTPGLPGFRGEPGPKGEPGPRGERGLKGENGVGKPGFPGPRGNGGPPGP
AGPPGPNGIGKPGFDGLPGAPGEKGEMGPFGAPGINGEPGPMGPRGPPGIDGIGIPGVGG
VPGMQGPVGPKGEPGIRGLPGLPGPAGYGKPGLPGLKGDRGQPGVPGAIGDKGEPGIDGE
AGEQGPQGVTGAPGMPGSMGLPGKYGLPGLKGEVGLPGPPGIPGMRGDQGPNGFAGKPGV
PGERGLPGSHGPPGPTGPKGEPGFTGVPGVPGLTGSLGPKGDVGIPGQPGLRGPSGIPGL
QGPSGPMGPQGLPGLKGEPGLPGPPGVGKVGEPGITGPIGPPGIPGTRGLNGPPGPPGPP
GPPGAPGVFDETGIAGLHLPDGGVEGAVLGNGKPGKPQYGRGELSARIAPAFTAILTSPF
PASGMPVKFDRTLYNGHNGYNPATGIFTCPISGIYYFAYHVHVKGTNVWVALYKNNVPAT
YTYDEYKKGYLDQASGSAVLELKENDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgttggagcctgacccagaaagctcattcttcttgcctgttttaaagactcgc
ggtgaagccaggatgctcgccgaagctgtctcattgctcctgcttgtggctggcatccgc
tcggtgtccggaggaggtgctggaggcggaggatatgctcaagtgaaatacatgcagccc
atggtgaaagggcccctgggacccccattccgggaaggcaaagggcagtatctcgacatg
ccaccgctcctgccgatggatctcaaaggggagccaggccccccaggaaagccaggacca
agaggacctccaggccccccaggctatccaggaaaaccaggcactgggaaacccggactt
catggccagccaggccctgctgggccccctggattttctggtgttggcaaaccaggtatc
ccagggcttccaggaaaggcaggtatgaaagggatgcccggcctcaaaggtgaacccggc
atgagaggtgagcaaggccagagaggattacctggcccgccaggattgcctgggccagca
ggcatctcaatcaatgggaaaccaggcatgcagggcactccaggcctaccaggatttagg
ggtgagcctggcccaaaaggggagccagggcctcggggggagcgtggcttaaagggtgaa
aatggtgttgggaagccagggtttccaggtcccagaggaaatggagggccccctggcccc
gctgggcctccagggccaaacggcattgggaaaccagggtttgatggcttaccaggtgct
ccaggggagaaaggcgagatgggtccatttggagcccctgggatcaatggggaacctggg
ccgatgggtccacggggtccaccaggcattgatggaataggcatcccaggggtcggaggg
gttccgggtatgcaaggccctgtggggccaaagggagaacccggtatccgtggccttccc
ggtttacctgggcctgcaggctatgggaaaccgggtctgccaggcttaaaaggagatcgt
gggcaacctggggtcccaggagccattggcgacaaaggggaaccaggcatagatggggaa
gcaggtgagcagggccctcagggtgtcactggagccccagggatgccgggctccatgggc
ttgccgggcaaatatgggctgccaggcctcaaaggtgaggttgggttacctgggccccca
ggaataccagggatgcgtggagaccaagggccaaatggttttgcagggaaaccaggggtg
cctggagagagaggtctgcctgggtcacatggaccccctggccccacaggcccaaaagga
gaaccaggcttcacaggggttcctggagtgccagggttaacaggtagcctgggaccaaag
ggggatgtaggaattccaggccagccaggcctgaggggcccatctggtattccaggccta
caaggcccttctggtcccatggggccacagggcttaccagggctgaaaggggaacctggc
ctcccaggccctccaggtgtggggaaggtaggggagcctggcattacaggacccattggc
ccaccaggaataccagggacacgtggattaaacggccccccaggaccaccagggccgcct
ggtccccccggggcaccaggggtgttcgacgagacaggcattgctgggctgcacttgcca
gatggaggcgtggaaggagcggtgttagggaatggcaagcctgggaagccacagtatggc
agaggggagctctctgcccggatagcacccgctttcacggccatcctgacctccccattc
ccagcctctggcatgccagtcaaattcgacaggactttgtataacgggcacaacggctac
aatccagccactgggatattcacctgccccatctccggcatctattactttgcctatcac
gtgcacgtcaaagggactaatgtttgggtggcgctttataagaacaatgtgcccgccaca
tacacctacgatgagtacaaaaaaggctacctggatcaagcctcaggcagcgcagtgctc
gaactcaaagagaatgaccaagtctgggtccaaatgccctcggaccaagccaatgggctg
tactccacagaatacatccactcctccttctccggcttcctgctttgccccacataa
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