Caretta caretta (Loggerhead turtle): 125624726
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Entry
125624726 CDS
T09292
Symbol
RPA2
Name
(RefSeq) replication protein A 32 kDa subunit isoform X1
KO
K10739
replication factor A2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03030
DNA replication
ccay03420
Nucleotide excision repair
ccay03430
Mismatch repair
ccay03440
Homologous recombination
ccay03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125624726 (RPA2)
03420 Nucleotide excision repair
125624726 (RPA2)
03430 Mismatch repair
125624726 (RPA2)
03440 Homologous recombination
125624726 (RPA2)
03460 Fanconi anemia pathway
125624726 (RPA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccay03032
]
125624726 (RPA2)
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125624726 (RPA2)
DNA replication proteins [BR:
ccay03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
125624726 (RPA2)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
125624726 (RPA2)
MMR (mismatch excision repair)
125624726 (RPA2)
DSBR (double strand breaks repair)
HR (homologous recombination)
125624726 (RPA2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
TFA2_Winged_2
Motif
Other DBs
NCBI-GeneID:
125624726
NCBI-ProteinID:
XP_048681867
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All DBs
Position
19:complement(18969014..18987261)
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AA seq
342 aa
AA seq
DB search
MAAAAQPLAGAAATGRSGLRLRHPRHGGSRLAGALRALRVGLAAWVAACGAQSRGLGQEP
SVSGGESAAPAMWSSHGGFESGYGGSAISGGYTQSPGGFGSPAATQGEKKQRSRSQNIVP
CTVSQLLAAEQIDETFKIREVEISQVVIMGIIRQAEKAPTNILYKIDDMTAAPMDVRQWV
DTDEAGSENVVVPPGTYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHLLEIVNAHMV
LRKSIMTSSKMPQSLGSFGMGDMASYGCGSSVPVNGLTAHQSQVLNLIKSCSDPEGLSLK
ELKSQLHNINIITIKQAVEFLSSEGHIYSTVDDDHYKSTDAE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctcagccgctcgccggggccgcggcgaccggaaggagcggactgcgc
ctgcgccacccccgccacggtgggagccgattggccggagcgctgcgcgcgctgcgtgtc
gggctcgcggcctgggtggctgcttgtggcgcgcagagccgcggtttggggcaggagccg
agcgtgtctggcggggagtccgcggcacccgccatgtggagcagccacggtggctttgag
agtggctatggagggtctgcaattagtgggggatacacacagtccccaggggggtttgga
tctcctgcagccacccagggagaaaagaaacagagatcccgatcccagaatattgtgcca
tgtacagtgtctcagttacttgctgctgagcagattgatgagacattcaagatccgagaa
gtagagatctcgcaggttgttatcatggggataatcagacaggcagagaaagcaccaacc
aacatcctctacaaaatagatgatatgactgcagccccaatggatgtcagacagtgggtt
gatactgatgaggcagggagtgagaatgttgtggtgcccccaggaacttacgtgaaagtg
gctggtcatcttcgatcattccagaataagaagagcctggtagcatttaagatcatgcct
cttgaagatatgaatgagttcaccacacacttattggaaatcgtcaatgcacatatggtc
ctcagaaaaagcatcatgacatcatcaaaaatgcctcagtctctgggctcctttggaatg
ggtgatatggcaagctatggatgtggtagtagtgtgccagtgaatggacttacagcacat
cagagtcaggtgttaaatttgattaaaagctgctctgatccagaaggcttgagcctgaag
gagctgaaatcccaactacataacatcaatataataacaatcaagcaagcggttgaattt
cttagcagtgagggacacatctattccactgtggatgacgatcactataaatctacagat
gccgaataa
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