Caretta caretta (Loggerhead turtle): 125624855
Help
Entry
125624855 CDS
T09292
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03013
Nucleocytoplasmic transport
ccay03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125624855 (SRRM1)
03015 mRNA surveillance pathway
125624855 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125624855 (SRRM1)
03041 Spliceosome [BR:
ccay03041
]
125624855 (SRRM1)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125624855 (SRRM1)
Spliceosome [BR:
ccay03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
125624855 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
125624855
NCBI-ProteinID:
XP_048682104
LinkDB
All DBs
Position
19:8566100..8593074
Genome browser
AA seq
905 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEDKDSREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPRHRTKSRSVTPAPEKKEETPEPEPSVQAKETLIQEATSTS
DILKVPKPEPVPDTKETSPERNSKKEREKEKEKTRQRSPSRSKSRSRSRSHSPSHSRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPLRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRIVSSPPRKTRKLSPSASPPRRRHRPSPPASSPPKPRRSPTPQQ
SNRGRKVRGSISPGRASAPKHKSIEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQ
RRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSPSPSPRKRQKDSSPR
MQMGKRWQSPMIKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSP
TPRRYSPPIQRRYSPSPPPKRRTATPPPLPKRRASPSPQPKRRISHSPPPKQRSSPVAKR
RSPSLSSKHRKGSPSSRSNRETRSPLQNKRHSPSPRPRASHTSSSPPPLRRGTSSSPKRR
QSPSPSTRPIRRVSRTPEPKKTKASTPSPQSVRRVSSSRSASGSPEPAPKKHQAPPSPTR
SRSPSTNWSPPPVKKAQSPTQSQSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKK
EKAAAAAAAAATSAATSSAQEDPEAETEPKKETESEAEDNLDDLEKHLREKALRSMRKAQ
VSPPS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgggcttcttccgcggaacaagtgcggagcaggacaatcgcttcagcaacaaa
cagaagaagctcttgaagcagctgaaatttgcagaatgtctagaaaagaaagtggacatg
agcaaagtaaacctggaagtaatcaagccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttattttcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactgggtttttgaatgggaaaaatgctagagag
ttcatgggtgaactgtggccactgctgttaagtgcacaagaaaacattgctggtattccc
tctgctttcctcgagctgaagaaagaagaaataaaacaaagacagattgagcaagaaaag
ttggcttctatgaagaaacaagatgaagacaaggacaagagggacaaagaggacaaagac
agcagagaaaaaagggacagatccagaagcccaagaagacgcaagtcaaggtctccttcc
cctagaaggagatcatctcctgtcagaagagagagaaagcgtagccactctcgatctcct
cgtcacagaaccaagagccgtagtgttactcctgcaccagaaaagaaagaggagactcca
gagccagagccttcggtgcaggcaaaggaaactttgattcaagaggcaacatcaactagt
gatatactgaaagttcccaaacctgaacctgtaccagatactaaagaaacttccccagaa
cgaaattcaaagaaagagagagagaaagaaaaagagaagactcgtcaaagatcaccatcc
cgttccaaatcaaggtcaaggtctcgctcacattccccttctcattctagaccaagaagg
cgtcatagatcacggtcaaggtcttactcccctagaaggcggccaagcccaagacgacga
ccatctcctaggagaaggagtcctccaaggcgcatgcctcccccacccagacacagaaga
agtagatcccctctgaggcggagaagacggtcatcggcatctttatctggaagcagctct
tcttcctcctcttcacgctctcgatcaccgccaaaaaaaccacctaaaagaattgtatcc
agtcctcctcgcaaaacacgtaaactgtctccttctgccagccctcctaggcggaggcac
aggccttccccaccagcaagttcgcctccaaagccacgcaggtctccgacacctcagcag
tcaaatcgtggaagaaaagtccgtggttctatttctccagggagagcctcagcacctaaa
cataagagtattgaaaaaagagagtctccctcaccagcgccaaaacctagaaaagtagaa
ttgtctgaatcagaagaagacaaaggtggaaaaatggctgcagcagattctgtgcaacag
agacgtcagtacagaaggcaaaaccagcagtcttcatctgactctggttcttcatcttcc
tctgaagaggagcgaccaaaaagatcaaatgtgaagaatggtgaagtgggtaggcgcaga
cgacactcgcatagtccatcaccttccccacggaaacgacaaaaggactcttcccctcgg
atgcagatgggaaagaggtggcaatcaccaatgattaaaagtaggaggaggaggagtcca
tcaccaccacctgccagaagacggcgctctccttctcctgcccctcctccaaggcggcgc
agatcgccttcattgcctcgccgaaggtctccatcaccacctcctcgcaggcgctcacct
actcccagacgatattctcctccaatacagagacgatactctccttccccacctcctaag
cgaagaacagcaactccccctccccttccaaaacgaagggcatcaccttctccacaaccc
aagcgcagaatctcgcattctcccccaccaaaacaaagaagttctcctgtggcaaagagg
cgttccccatcactatcttccaagcataggaaaggttctccttccagcaggtctaatcgt
gaaacccgatccccactacaaaacaaacggcattcaccatctccacggcctagagcttca
catacctcttcaagtccaccgcctctgcgaaggggaacttcatcttcacccaagcggaga
cagtctccatctccaagcactagacccatcaggagagtgtcaaggaccccagaacccaaa
aagacaaaggcttccacaccaagtccacagtctgtgagaagggtgtcttcatccaggtct
gcgtcaggatcgcctgagccagcacctaagaaacaccaagcacctccatcccctactcgg
tctcgatccccctccactaactggtcgccaccacctgtgaaaaaggctcaaagtcctacg
cagagtcaatcccctgcaaggaattctgaccaggaaggtggtgggaagaaaaagaagaaa
aagaaggataagaagcataaaaaggacaaaaagcacaagaaacacaaaaaacataagaaa
gagaaggctgcagctgctgcagcagctgctgctacttcagcggctacttcatcagcccag
gaagacccagaagcagagacagagcccaaaaaggagacagagagcgaagcagaagataac
ctggatgatttagaaaaacatctgcgagagaaggcactgaggtcgatgaggaaggcacaa
gtgtccccaccatcttag
DBGET
integrated database retrieval system
