KEGG   Caretta caretta (Loggerhead turtle): 125625164
Entry
125625164         CDS       T09292                                 
Symbol
CACNA1S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S
  KO
K04857  voltage-dependent calcium channel L type alpha-1S
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay04010  MAPK signaling pathway
ccay04020  Calcium signaling pathway
ccay04260  Cardiac muscle contraction
ccay04261  Adrenergic signaling in cardiomyocytes
ccay04270  Vascular smooth muscle contraction
ccay04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    125625164 (CACNA1S)
   04020 Calcium signaling pathway
    125625164 (CACNA1S)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    125625164 (CACNA1S)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    125625164 (CACNA1S)
   04261 Adrenergic signaling in cardiomyocytes
    125625164 (CACNA1S)
   04270 Vascular smooth muscle contraction
    125625164 (CACNA1S)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ccay04040]
    125625164 (CACNA1S)
Ion channels [BR:ccay04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   125625164 (CACNA1S)
SSDB
Motif
Pfam: Ion_trans GPHH Ca_chan_IQ PKD_channel CAC1F_C
Other DBs
NCBI-GeneID: 125625164
NCBI-ProteinID: XP_048682841
LinkDB
Position
20:complement(13590251..13681996)
AA seq 1875 aa
MEPASAQDDQKKKQQREKSKKAVPPAAPRPARALFCLTLQHPLRKACISIVEWKPFEIII
LMTIFANCVALAVYLPMPEDDTNASNSSLEKIEYVFLIIFTIEATLKIIAYGFLLHTDAY
LRNGWNVLDFAIVSLGLVTVVVEQINVMQGAPLTGKGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGQELFKGKMHKTCYYIGTDVLATVETE
KPSPCASTGHGHHCTINGTECRSGWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYW
VNDAIGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLE
EDLKGYMDWITHAEVMDSHRARGEGMLPSEEGGSETESLYEIEGMNKWILFFRQWRRWNR
LFRRKCREVVKSKFFYWLVILLISLNTLSIASEHHWQPEWLTRVQDSANRVLLSLFAAEM
LLKMYALGPHQYFMSLFNRFDCFVVCVGILEVILVEIDVMSPLGISVLRCIRLLRIFKIT
RYWTSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKYDFEDVEVLRSTFDN
FPQALISVFQILTGEDWNSIMYNGIMAYGGPSFPGMLVCIYFIILFVCGNYILLNVFLAI
AVDNLAEAESLTSAQKAKAEERKRRKMSRSYPEKSEEEKLLLAKKLEQKAKAEGIPTTAK
LKVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASAF
FIFSPTNKIRVLCHRIVNATWFTNFILLFILLSSVSLAAEDPIRPESFRNQVLGYFDIGF
TSVFTVEIVLKMTAYGAFLHKGSFCRNYFNILDLLVVAVSLISMGIESSAISVVKILRVL
RVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVIVTTLLQFMFACIGVQLFKGKFSSCTD
PAKMTEEECRGYFILYVDGSPTQLELRPREWVHNDFHFDNVLSAMMSLFTVSTFEGWPQL
LYKAIDTHTEDMGPIYNYRVEIAIFFIIYIILIAFFMMNIFVGFVIVTFQEQGESEYKNC
ELDKNQRQCVQYALKARPLRRYIPKNPYQYQIWYVVTSSYFEYLMFFLIMLNTICLGMQH
YNQSAEMNYISDNLNVVFTILFTVEMFLKLLAFKAKGYFGDPWNVFDFLIVIGSIIDVIL
SEIDDSTDNSRVSITFFRLFRVMRLVKLLSRGEGVRTLLWTFIKSFQALPYVALLIVMLF
FIYAVIGMQMFGKIALVDGTEINRNNNFQTFPQAVLLLFRCATGEAWQEILLACSYGKLC
DPESDYAPGEEYTCGTGFAYFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHH
LDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFCPHRVACKRLVCMNMPLNSD
GTVTFNATLFALVRTALKIKTEGNFEQTNEELRAIIKKIWKRTSMKLLDQVIPPIGEDEV
TVGKFYATFLIQEHFRKFMKRQEEYYGYRPKKNAIAIQAGLRSIEEEAAPEIHRTISGDL
TSEEELERAMMEAAIEEGIYRRTGGLFGHVDSFMERNSPLQPHVTSQRPLQFTEVGSEDV
DSPVFLDDFPPDRNPNTNNSNAAARVQYENELQGERMLPASCQPWPHSALGHNRSFRLEK
LQRQLDRRRAASVGGCPGCGLQLPREEAVARERGAELSSERQLDGGHEANGEGDAAASTP
PTNLLIQEALLSGGLGALARDPSFVMAVGAERAATCQLEMVVMEEAAAELLRGRESPVGA
EAGSTRRHTLATSLHSSRGPTRLAPRGHLQPPPVRRRWGSPLPTVPAGRCHPFVGFEREN
TAPWEHSTIPSHAQP
NT seq 5628 nt   +upstreamnt  +downstreamnt
atggagcctgcttctgcccaggatgatcagaagaaaaagcaacagagagaaaagtcgaag
aaagcggtgccacccgcagccccccgaccagccagggctctgttctgcttaacccttcag
cacccgctgcggaaagcctgcatcagcattgtggaatggaaacccttcgagatcattatc
ctgatgaccatctttgccaactgcgtggcgttggccgtctacctgcccatgccggaggat
gataccaacgcttcaaactccagcctggagaagatcgaatacgtcttcctgatcatcttt
accattgaagccacactcaagatcatcgcctatgggtttctactccacacggacgcctac
ctccgaaacggctggaacgtgctggacttcgccattgtctctttggggctggtcacggtg
gttgtggagcagatcaacgtgatgcagggtgcaccgctgacggggaagggcggctttgac
gtcaaagccctgcgagccttccgcgtgctgagacccctgcgcctggtgtcgggagtgcca
agcctgcaggtggtcttgaactccatcattaaggccatggtgcccctgctccacatcgcc
ctgctggtcctcttcatgatcatcatctacgccatcgttgggcaggagctgttcaagggc
aagatgcacaagacttgctactacatcgggacagatgttcttgccaccgtggaaacggag
aagccatccccatgcgccagcaccggccacgggcatcactgcaccatcaacggcaccgag
tgcaggagcgggtggccggggcccaacaacggcatcacccactttgataattttggcttc
gccatgctgaccgtgtaccagtgcatcaccatggagggctggacagaagtcctctactgg
gtgaacgacgccatcgggaacgagtggccctggatctatttcgtcagcctcattctgctg
ggctctttcttcgttctcaacctggttctgggtgtgctcagtggggagttcaccaaggag
cgtgagaaggccaagtcacggggcacgttccagaagctgcgggagaagcagcagctggag
gaggatctgaagggctacatggactggatcacccatgccgaagtcatggacagccaccgg
gccaggggagaagggatgctgccgtcagaggaagggggctcagagacagagagcctgtat
gaaattgagggcatgaacaaatggattctcttcttccggcagtggaggcgatggaaccgc
ctgttccgcaggaagtgccgcgaagtggtgaagtccaagtttttctattggctggtgatt
ctgctcatctcgctgaacaccctgtcaatcgcctccgagcatcactggcagcccgagtgg
ctgacccgcgtgcaagacagcgccaaccgggtgcttctgtcgctctttgcggccgagatg
ctgctgaagatgtacgccctgggcccgcaccagtacttcatgtccctcttcaaccgcttc
gactgcttcgtggtgtgcgtcggcatcctggaggttatcctggtggagatcgacgtcatg
tcgcccctgggcatctccgtcctgcggtgcattcgcctgctgaggatcttcaagataacc
aggtactggacctctctgagcaacctggtggcgtccctgctgaactcggtccgctccatc
gcctccctgctcctcctcctcttcctcttcatcatcatcttctccctgctggggatgcag
ctcttcggcgggaagtacgactttgaagacgtggaggtgctgcgtagcactttcgataac
ttcccccaggcgctcatcagtgtcttccagatcctgactggagaagactggaattcaatc
atgtacaacgggatcatggcttatggagggccctccttccccggcatgctggtctgcatt
tacttcatcatcctcttcgtctgtgggaactatatcctgctcaatgtcttcctggccatc
gctgtggacaatctggccgaggctgagagcctgacgtctgcccagaaagccaaagccgag
gagaggaagcggaggaaaatgtccagaagttacccagagaaatcagaagaggaaaagctc
ctgctggccaagaagctggagcagaaagccaaggctgaaggaatccccaccacagccaag
ttaaaagtggatgagtttgaatcaaacgttaatgagatcaaagacccctacccttctgcg
gacttcccaggtgacgacgaggaagatgagcccgaaatccccctgagccctcggccgcgc
cccctggcagagctgcagctcaaggagaaagcagtgcccatgcccgaagccagcgccttc
ttcatcttcagccccaccaacaagatccgagtgctgtgccaccgaatcgtcaacgccacc
tggttcaccaacttcatcctgctcttcattctgctcagcagcgtctccctggcggctgag
gatcccatccggcccgagtccttcaggaaccaggttctgggatattttgacatcggcttc
acctccgtgttcacagttgaaatagtcctgaagatgactgcatacggcgcattccttcac
aaggggtccttctgccggaactacttcaacatcctggatctgctggtggttgccgtctcc
ctcatctccatgggaattgagtccagcgccatctccgtggtgaaaatcctgagggtgctg
agagtcctgcggccgctgcgggccattaaccgagcgaaggggctgaagcacgtagtccag
tgcgtgttcgtggccatcaagaccatcggcaacattgtgattgtcaccaccctactgcag
ttcatgttcgcctgcatcggggtgcagctcttcaaggggaagtttagcagctgtacggat
ccggccaagatgacagaagaggaatgcagaggctacttcatcctgtacgtggacggcagc
cccacacagctagagctgcgcccacgcgagtgggtacacaacgacttccacttcgacaac
gtcctctcagccatgatgtcgctcttcaccgtctccaccttcgagggctggccgcagctg
ctgtacaaggccatcgacacccacactgaggacatgggccccatctacaactaccgggtg
gagatcgccatcttcttcatcatctacatcatcctcatcgccttcttcatgatgaacatc
ttcgtcggcttcgtcatcgtcaccttccaggagcagggcgagagcgagtacaagaactgc
gagctggacaagaaccagcgacagtgtgtccagtatgcgctgaaagcccgcccgctgaga
cgctacatccctaagaacccctatcagtaccagatctggtatgtggtgacctcctcctac
ttcgagtacctcatgttcttcctgatcatgctgaacaccatctgcctgggcatgcagcac
tacaatcagtcagctgagatgaactacatttcggacaacttgaacgtggtcttcaccatc
ctcttcaccgtggagatgttcctcaagctcctggcctttaaagccaagggctatttcggt
gacccctggaacgtctttgatttcctcatcgtcatcgggagcatcattgacgtcatcctg
agcgagatcgatgattctacagacaattcccgcgtctccatcaccttcttccgacttttc
cgggtgatgaggttggtgaagctgttgagccggggggaaggagtcaggaccctgctctgg
accttcatcaagtccttccaggccctgccctacgtggcgttgctgatcgtgatgctgttc
ttcatctacgctgtgatcgggatgcagatgtttgggaaaatcgccctggtggatggaacc
gaaatcaaccggaacaacaacttccagactttcccacaagccgtgctgctgctcttcagg
tgtgcaacaggcgaggcctggcaggagatcctgctggcctgcagctatgggaaactgtgt
gaccccgagtctgactacgccccaggggaggagtacacctgtggcacgggcttcgcctac
ttctacttcatcagcttctacatgctctgcgccttcctgattatcaacctctttgtcgcc
gtcatcatggacaactttgactacctcacgcgggactggtccatcctgggtccgcaccac
ctggatgaattcaaaagaatctgggcagaatatgacccggaagccaagggaagaatcaaa
catctggatgtggtgaccctgctgagacgcatccagcctcccctgggctttgggaagttc
tgtccgcaccgcgtagcttgcaagcggctggtgtgcatgaacatgcctctgaacagcgac
ggaaccgtcaccttcaacgccactctcttcgctctggtgcggacagccctcaagatcaag
acggaaggtaactttgagcagaccaacgaggagctgagagccattatcaagaagatctgg
aagagaactagcatgaaactcctggaccaggtcattccgccgattggagaggacgaggtg
accgtgggcaagttctacgccaccttcctcatccaggagcacttccggaagttcatgaag
cgccaggaggaatattatgggtatcggcccaaaaagaacgccattgctatccaggccggc
ctgagaagcatcgaagaggaagccgcacccgagatccaccgaacgatctctggggacctg
acctccgaggaggagctggagagggccatgatggaggcagcgatagaggaagggatatac
cggaggacgggtggcttgtttggccatgtggactccttcatggagcggaacagccccctg
cagccccacgtgaccagccagagacccctgcagttcactgaagtggggagcgaagacgtg
gactcccccgtcttcctggatgacttcccgccggacaggaaccccaacaccaacaacagc
aatgcagctgcacgggtgcagtacgagaatgagctgcagggagagaggatgctgccggca
tcctgccagccatggccgcactctgccctgggccacaaccgctccttccgcctggagaag
ctgcagcggcagctggacaggaggcgggcagccagtgtcggcggatgcccggggtgcggg
ctgcagctgcctagagaggaggcggttgcccgggagcggggagcagagctgagctccgag
cgccagctggatggtggccatgaggcgaacggggagggagatgctgccgcctctaccccg
cccaccaatttactcatccaggaggctcttctctcggggggcctcggcgctctggcccgc
gacccatcctttgtgatggccgtgggagccgagagggcggccacctgccagctggagatg
gtggtgatggaagaggccgcggccgagttgctgaggggaagggaaagcccggtgggagca
gaggccggttccacccgccgacacaccttggccacatccctgcatagctcccggggccca
acacgcctggctcccagaggccatctccagcccccaccagtgagacgccgctggggatcc
cccttgccaacggtgccagccgggaggtgccacccatttgtgggctttgagagggaaaac
acagcaccatgggaacacagcaccatcccctcccacgcccagccctga

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