Caretta caretta (Loggerhead turtle): 125625198
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Entry
125625198 CDS
T09292
Name
(RefSeq) bile acid receptor-like
KO
K08538
farnesoid X receptor beta
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125625198
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccay03310
]
125625198
Transcription factors [BR:
ccay03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125625198
Nuclear receptors [BR:
ccay03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
125625198
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125625198
NCBI-ProteinID:
XP_048682908
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Position
20:complement(553595..575779)
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AA seq
514 aa
AA seq
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MKQLELEQSMANTFVTVSDGYCLAEPIQYYDVLPEHINYQLQDSDFQATPYCQYSTVQFP
PVLQSQPSQSQYNTYSLDSQYSDGQYIISNCELNQPSCMVAHNNDDDGYHRLKRPRLSHS
SLRMKGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAIYRCKNGGHCEMDMYMR
RKCQECRLKKCKAVGMLAECLLTEVQCKSKRLRKNFKQKSSFLCSIKVEDEGVNSKHVSS
TTRSGKIQGRMELTPVEHQLIDHIVAAHQKYTIPLEEAKKFLQETANPEESFLRLSETAV
VHVQVLVDFTKRLPGFESLASDDQIALLKGSTVEAMFLRSAQIYNQRVNECQSSVSESHV
RFSDHAVYCHVQDLDKSTIYSMEISHSEESPTSTTTTGITEEFITALFYFYRSMGELNVT
ETEYALLVATTIFFSDRPLLKNKQHVEKLQEPLLGILYKYSKIYHPEDPQHFARLIGRLT
ELRTLNHNHSEVLVMWRTKDPKLTSLLCEIWDLH
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttggagctggagcagagtatggcaaatacctttgtaactgtatctgatggg
tactgtcttgctgaacccattcaatattatgatgttttgccagagcacatcaattatcag
ctacaagactcagactttcaggctactccttactgccagtattcaactgttcagtttcct
ccagtgttacagtcacaaccttcccagtcacaatacaacacatacagcctggattctcag
tacagtgatgggcagtacataatcagtaattgtgaattaaaccagccttcctgcatggtt
gcccataataatgatgatgatggatatcatagactaaaaaggccaagactaagtcattcc
tccttgcgaatgaagggtcaggaagagctctgtgttgtatgtggggacaaagcctcggga
taccactacaacgcgctcacttgtgaaggctgtaaaggattctttcgacgtagtattacc
aaaaatgcaatatacagatgcaagaatggtggccactgtgaaatggacatgtacatgcgg
aggaagtgtcaggagtgtcgcctgaagaagtgtaaggctgtgggaatgttggcagaatgt
ttgctgactgaagtccagtgtaaatcaaaacgactccgaaagaatttcaagcagaagagc
agtttcctttgtagcatcaaggtggaagatgagggagtaaacagcaagcatgtttcatcc
acaactagatctggaaaaatccaagggaggatggaacttactccagtggaacatcaactt
attgatcacattgttgctgcccatcaaaaatatacaattcccctagaggaagcaaagaag
tttctgcaggaaactgcaaaccctgaagagagttttctgaggctctcagagacagcagtt
gttcatgtgcaagtactagtggatttcacaaagagactcccaggatttgaaagtttagcg
agtgatgaccagattgcattgttaaaaggttcaacagtggaagcaatgtttttgcgttca
gcccagatatataatcaaagagttaatgaatgccaatcatcagtgagtgaaagtcatgta
agattttctgatcatgctgtgtattgtcatgttcaagaccttgataaaagtactatttat
tccatggaaatatctcacagtgaagagagtccaacttccacaactaccacaggtatcacc
gaggagtttatcactgcgctattttacttctacagaagcatgggagaacttaacgtgact
gagacggaatatgccctacttgtagcaactactatatttttttcagatcgcccactccta
aaaaacaaacaacatgtggaaaaactccaagaaccccttttaggtattttgtacaaatat
tcaaaaatttatcatccagaagatccacagcattttgcacgcctcatagggaggcttacc
gaactcaggaccctcaatcataaccattcagaagtgctagtaatgtggaggacaaaagac
cccaaactgacctctttactctgtgaaatttgggatttgcactga
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