Caretta caretta (Loggerhead turtle): 125625409
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Entry
125625409 CDS
T09292
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccay04515
]
125625409 (DSCAML1)
Cell adhesion molecules [BR:
ccay04515
]
Immunoglobulin superfamily
DSCAM family
125625409 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Interfer-bind
Ig_C17orf99
Receptor_2B4
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
125625409
NCBI-ProteinID:
XP_048683397
EnsemblRapid:
ENSCECG00000003539
LinkDB
All DBs
Position
21:complement(17384414..17696130)
Genome browser
AA seq
2039 aa
AA seq
DB search
MWLVTFFLLYSLQKAHTEDVGTSLYFVNDSIQQVTFSSTVGVVISCPAAGSPSAALRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITFYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTILDGFQSREVKAGQ
LVELPCIASGYPNPAIRWIKDGRPLPADSRWTKRITGLTISDLRVEDSGTYICEVTNTFG
SAEVTGTLTVIDPLHVSLTPKKLKTGIGSTVILSCALSGSPEYALRWYRNTDLVVLDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKAQTAQDFSIIALEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTITWALDDEPIQRDNGHRTNQYTMSDGTTVSHMNVTSPQIKDGG
VYRCAARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKD
ALLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKVGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQMKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPMTSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSASSVVVSWLPPTKPNGIIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQY
MLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPAPAI
KWTKDSEDSAIPVAVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNAWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSTERSFK
LDSLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHLNSTHARLNLQ
GWSSGGCPIVAIVLEYRPKGNWVWQSLKTNNSNEVFLTELREATWYELRMKACNSAGCGN
ETTQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKAT
IPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTR
NRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTP
SEPGICRFTASPPKPQDSDRGKNVAVPIPHRANKSDYCNLPLYMKSEAFFRKPDIHDPCP
VVPPREASIRNLARAYHTQARHMTLDPGSKPLGLPHPGSSTTTLPQRTLTMPVSANSASA
PAASAPAADPAPAASAEPRMPTHTKMGGSRDSLLEMSTSGIGRSQKQGAGAYSKSYTLV
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaacttttttcctgctgtactctttgcagaaagcacacactgaagatgtt
ggaaccagtctctactttgtgaacgactccatccagcaggtgaccttctccagcacagtc
ggggtggtgatctcctgccccgcagcagggtcacccagcgccgcccttcgctggtacctc
gccacaggggacgacatctatgatgtaccgcacatccggcatgtccatgccaatgggact
ttgcagctctaccccttctcgccatcagccttcaatagctttatccacgacaatgactac
ttctgtaccgcggagaactcagcgggcaaaatcaggagtcccaatatccgtgttaaagca
gttttcagggaaccttacaccgtccgggtggaggatcaaaggtcaatgcgtggaaacgtg
gctgtcttcaagtgcctcatcccttcttcagtgcaggaatacgttagcgttgtgtcctgg
gagaaagatactgtttctatcatcccagaaaataggttttttattactttttatggaggt
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaag
cacaagtacagtggagagacacgccagagcaatggggctaggctctctgtgtcagaccca
gcagaatccatccctaccatcctagatggctttcagtccagggaggtaaaggcaggccaa
ctggtggagcttccgtgcattgcctccgggtacccgaacccagccatccggtggatcaag
gatgggcgcccactccctgcagacagcaggtggaccaagcgcatcacaggactgacaatc
agtgacctgcgtgtggaggacagtgggacgtacatctgtgaggtcacaaacaccttcgga
tcggccgaagtcaccgggaccctcacagtcatagaccctctgcacgtgagcctcacgcca
aagaagctgaagacgggcattggcagcacagtcatcctctcctgcgccctcagcggctcg
ccggagtacgccctccgctggtaccgcaacacagacctggtggtgctggacgactacatc
tccatccgggggattagcaacgagaccctcctcatcactgccgcgcagaagagccactct
ggggcctaccagtgtttcgccacccggaaagcccaaacggcgcaagacttctccatcatt
gcgctggaggatgggaccccccggatcgtctcctccttcagcgagaaagtggtcaacccg
ggcgagcagttctccctgatgtgtgctgccaaaggcgctcccccacccaccatcacctgg
gccctggacgatgagcccatccagagggacaacgggcaccgcaccaatcagtacaccatg
tcagacggcaccaccgtgagccacatgaacgtgaccagcccgcagatcaaggacggaggg
gtgtaccggtgtgccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaac
gtaagaggtcccccgagtatccgagccatgaagaatataacagcagtggcgggtagggat
accttcatcaactgcagggtgatcgggtatccatactattccatcaagtggtacaaggat
gccttgctgctgccagataaccaccgccaggtggtctttgagaacgggacccttaagctg
atggatgtgcagaagggcatggatgaaggggagtatctctgcagcgtcctgatccagccg
cagctctctatcagccagagcgtccatgttaccgtgaaagtccctcccctgatccagccc
tttgagttcccaccggcctcgattggccagctcctctacatcccctgcgtggtctcctcg
ggggacatgcccatccgcatcacttggcggaaggatgggcaggtgatcatctctggctcg
ggggtcactatcgagagcaaagagttcatgagctccctgcagatctccagcgtctccctc
aagcacaacggcaactacacgtgcatcgccagcaacgctgccgccaccgtcagccgcgag
cggcagctgatcgtgcgagtgccgcctcgtttcgtggtccagcccaacaaccaggatggc
atctatggcaaagtgggggtgttgaactgctctgtggatgggtatccccctcccaaggtc
atgtggaagcatgcaaaaggaagcgggaacccgcagcagtaccatcctgtgcccctcacg
ggccgcattcaaatccttcccaacagctcgctgcttattcgtcatgtgctggaggaggac
attggctattacctttgccaggccagcaacggtgtggggacggatatcagcaagtccatg
ttcctcactgtcaagatcccagccatgatcacttcccaccccaacaccaccattgcgatc
aagggccagatgaaggagctgaattgcacagcccgaggggagcggccaatcatcattcgc
tgggagaaaggcgacaccgtcatcgaccccgaccgcaacatgagatatgccattaccacc
aaggataacggtgacgaggtcatttcaacgctcaagcttaaaccagccgaccggggggac
tccgtcttcttctcctgccatgcgatcaattcttacggtgaagatagaggattgatccag
ctcactgtccaagagcctcctgacccgccagagctggaaattcgcgaggtgaaagcccga
agcatgaacttgcgttggactcagagatttgatggaaacagcatcatcactgggtttgat
attgaatacaagaataaatctgattcctgggattttaagcaatctacccgcaacatctct
cccaccattaaccaggctaatatagtggacctgcacccagcctccgtgtacagcatccgc
atgtactccttcaacaagattgggcgcagtgagccgagcaaggagctcaccatcagcacc
gaggaagcagctccggatgggcccccaatggatgtcactttgcagccaatgacatcgcag
agcatccaggtcacctggaaggccccaaagaaggaactccagaatggggtgatccgtggc
taccagatcggctaccgggaaaacagccccggcagcaacgggcaatacagcattgtggag
atgaaggctacgggggacagtgaggtctacaccttggacaacctgaagaagtttgcacag
tatggggtcgtggtgcaggcgttcaaccgtgcggggacggggccctcctccagcgagatc
aatgccaccacgctcgaggatgttcccagccagcccccggagaacgtgagggcattatcc
atcacatcagatgtggctgtgatctcctggtcggagcccccgcgcagtaccctgaatggc
gtgctcaaggggtacagggtgatcttctggtctctctatatggatggagagtggggggag
atgcagaacatcaccaccacgcgggagcgagtggagttgcgcggaatggagaagttcacc
aactacagtgtccaggttctggcgtacacacaggccggcgatggtgtccgcagcagcgtg
ctctacatccagaccaaggaggacattccaggccctcccgctgggataaaagctgtcccg
tcttctgccagcagcgtggtcgtgtcctggcttcccccaactaagccaaatgggatcatc
cggaagtatactatcttctgctccagccccgggtccggacagccagcccccagcgagtac
gagaccagccccgagcaactcttctaccgcatcgcccacctcaaccgcgggcagcagtac
atgttgtgggtggcggccgtgacctcggcgggacgtggcaacatcagtgaaaaggtcacc
attgagcctgctgggaaagccccagccaagatcatctcctttggcggcaccgtcaccact
ccgtggatgaaggatgtgaggctgccatgcaattcagttggggagccggcccctgccatt
aaatggacaaaggacagcgaggattctgccatcccagtggcagtggacggacaccggcta
atccaggccaacggcacgctggtcctgcgctcggtgaaagccgaggattctgggtattac
acctgcactgctaccaacgcatggggctttgataccatcatcattaacctgctggtgcaa
gttcccccagaccagccacgcttgactgtatctaaaacctcagcttcatccatcacgttg
gcctggattcctggggacaacggcggcagctccatcagaggctttgtgctgcagtactcg
gtggacaacagcgaggagtggaaggacgtgttcatcagctccaccgagcgctcgttcaag
ctggacagcctcaagtgcggcacgtggtacaaggtgaagctggcagctaagaacagcgtg
ggggctggccggatcagtgagatcatcgaggccaagacacatggcagagagccctccttc
agcaaggaccagcacctcttcacccaccttaattctacgcacgccaggctgaacctgcag
ggctggagcagcgggggctgccccatcgtggccattgtcctggagtaccggcccaagggc
aactgggtctggcagagcctcaagaccaacaactccaacgaggtcttcctgacggagctg
cgcgaggccacctggtacgagctccggatgaaggcctgcaacagcgccggctgcggtaac
gagaccacccagttcgccacgctggactacgacggcagtaccatacccccaatcaaatct
gctcagggggagggggatgacgtgaagaagcttttcaccattgcctgccctgtgatcctg
gctacgctcggggtggccctgctcttcatcatccgcaagaagaggaaggagaagcgtctg
aagagattgagagatgcaaagagcttggcagaaatgctaataagcaagaataaccggagc
tttgacacaccagtgaaaggtcccccccagggtccccggctgcatatcgacattcctcgt
gtccagctgctcattgaggataaggagggcatcaagcagctgggggatgataaagctaca
ataccagtgacagacaccgagttcagccaagctgtgaatcctcagagcttctgcactggg
gtatccttgcatcatccagctctgatacagaacaccggacccttgatcgacatgtctgac
attcgacccggtaccaacccagtttcccggaagagcgtgaaatccgcccacagcacccgg
aacaggtactccagccaatggactctcaccaaatgccaggcatctactcctgcacgtact
cttacatctgactggaggaccgtgggatcccagcatggaattacggtcacagagagtgac
agctacagcgccagtttgtctcaggacacggacaaagggcggaacagcatggtgtctacg
gagagcgcctcatccacctacgaggagctggcacgggcctatgagcacgccaagctcgag
gagcaattgcagcatgccaagttcgagatcacagagtgcttcatctcagatagctcttcc
gaccaaatgaccacagggaccaatgagaacgcagacagcatgacctccatgagcaccccg
tccgagccaggcatctgcaggttcaccgcctccccgcccaagccgcaggacagcgacaga
ggcaagaacgtggcggtgcccatccctcacagagctaacaagagcgattactgcaacctt
cctttgtacatgaaatcagaagcattcttccgcaagcctgacatccacgatccttgtcca
gtggtcccacccagggaagcctccatccgaaacctagccagggcttatcacacgcaagcg
aggcatatgacgctagacccaggcagcaagcctttgggcctgccacacccgggctcctcc
acaactactttacctcaaagaacactcaccatgcctgtctcggcaaactccgcttctgct
cctgccgcttctgctcctgccgccgatcccgctcctgccgccagcgctgagccacgcatg
cccacacacaccaagatgggaggctctagagactctttactagaaatgagcacatccggt
atagggagatctcaaaaacaaggggctggagcgtactccaaatcctacactcttgtgtag
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