Caretta caretta (Loggerhead turtle): 125625447
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Entry
125625447 CDS
T09292
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125625447 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125625447 (NFRKB)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
125625447 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
125625447
NCBI-ProteinID:
XP_048683511
LinkDB
All DBs
Position
21:6215889..6249631
Genome browser
AA seq
1331 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGEGNGTRIMEDCMLGTTRVSLPEDLLEDPEIFFEVVSLSTWQE
VLTDSQRDHLKKFLPHFPENNTEHQNKLIPALFSGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFKSQYKRYLNSQQQYFCRLLKQILASRNHLLDLARKGGPDLTLKKKYPSPPCG
PEERDRRTHQRYLKVLREVKEECGDTTLSSDEEDLSSWLPNSPAHCPSPALPLRVIPTLS
TLDMKTADKLDFGENDLKMMLKKHHEKRKRQPVRHLGDTGLGITCLFFSLSVSCKDHPDL
VTGDLTLDDIMTRVNAGRKGSLAALFDLAILKKKVKEKEEKKKKKLKVIKSEVEDLADSF
SNADGIPPIPQDPSPIALSAVKEEPLEEIKPCLGVNEISSSFFSLLLEILLLEGPATLSV
LEDKVLDWQSSPASTLNSWFSFAPNWSELVLPALQYLTGDSRDVPSSFSPFVEFKEKTQQ
WKLLGSSQDHEKELVALFQLWLETKDQTFFKENEDSSDATTPIPRVRTDYVVRPSTGEEK
RVFQEQERYRYSQPHRAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVT
ILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCV
KYDIGRKLWIYLHRDRSEEEFERIHQAQAAAAKAKKALQQKPKPPAKTKSSSKESSVKVF
PSSTSEPSQLSLSDSSMPPTPVTPVTPTTPALPATPISPPPVSVVSKTVTSVGPEPAKPS
QSVLLVSSPPMPQLGTLLSTGQSAQPQAGSQPPPTRVVSHTASSSGLPQVRVVTAQSSLP
PVSQQTPVVTQQQQPASVPQIRATATQTKVPPQAVMTVPVKAQTSPVQVQRPGASVTGQA
GIAVTALSAASSPTAKPATSSPGSSAPTSSSSTTVIQNVAGQNILKQVAITGQLGMKTQA
GSGIPLTAANFRIQGKDVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDL
FTAAAGSSTSGKGISATLHVTSNPVQSADSPAKTSTVTSASPSPAGTTVVKVTPDLKTAE
STSSAFRLMPALGMTVADQKGKTVTTVASTEAKPAATIRIVQGLGVMPPKAGQTITMATH
TKQVPSSSSVSIPGTVHTSAVSLPTMSAAVSKAVAVASGAAGTPITIGTGATAVRQVPVS
TTVVATSQAGKLPARITVPLSVISQPVKGKNVVTAPIIKGNLGANISGLGRNIILTTMPA
GTKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVSASHLQQGTVSGSTKAVSTVVVTT
APSPKQTQDQQ
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggattctctggaccacatgctgacagacccattggagctgggaccatgcggggaggga
aatggcacacggatcatggaggactgcatgctgggaacaacaagagttagcctgccagag
gacctcttagaggatcctgagatcttttttgaagttgtcagcctgtctacgtggcaggag
gtgctgacagactcacagcgagaccacctaaaaaagttcttgccccatttcccggaaaac
aacactgagcaccagaacaagctcatcccagccttgttcagcggagagaacttccgcttt
ggaaacccactgcacattgcccagaaactcttccgagatgggcactttaatcctgaagtt
gtgaaataccgacagctctgtttcaagtcccagtacaaacgctacctgaactcccagcag
cagtacttctgccgactgctgaagcagatccttgcttcccgcaaccacctgctggatctg
gctaggaaaggtggccctgatctgacccttaagaaaaaatatccatcccctccgtgtggc
ccagaagaacgggatagacggacacatcagcgctacctgaaggttctgagggaggtgaag
gaggaatgtggagacaccactttatcctctgatgaagaagatctaagttcctggcttcca
aattctccagcacattgcccgagtccagctcttcctctgagagtgattcccacattgtca
actctggatatgaaaacagcagataaacttgattttggggagaatgacctgaagatgatg
ctgaagaagcatcatgagaaacggaaacgtcagcctgtaagacacctaggagacacgggg
ctgggaattacctgtttgttttttagcttgtctgtcagctgtaaggaccaccctgaccta
gtgacaggggacctgactcttgatgacatcatgacccgtgtgaatgctggccggaagggc
tccttggcagccttgtttgaccttgccatcctgaagaagaaggtgaaagaaaaggaagaa
aagaagaaaaaaaagttgaaggtgattaaatctgaggtggaagatttggccgactcgttt
agcaatgctgatggaatcccaccaataccacaggacccgtcccccattgctctgtcagct
gttaaagaagaacctcttgaagagatcaagccatgtcttggagtaaatgaaatctcttcc
agcttcttctctcttcttctggagatcctccttctagaaggacctgctactctgtctgtg
cttgaggataaagttctggattggcagtcttcccctgcgagcactctgaatagctggttc
tcctttgcccctaactggtcagaactggttttgcctgctctgcaatatctgacaggtgac
agcagagatgttccttccagcttttctccctttgttgaattcaaggaaaaaactcagcag
tggaaattgcttggctcttcccaagaccacgagaaggaactggtagcactcttccagctc
tggttggagaccaaagaccagacttttttcaaggaaaatgaagacagctcagacgccacc
acaccgattccccgggtaaggactgactacgtggtccgtcccagcacgggggaggagaaa
cgcgttttccaggagcaggagcgctaccgttacagccagccccacagggccttcaccttc
cgcatgcatggctttgagtcagtggttggtcccgtgaagggagtgtttgacaaggagacc
tcgctgaacaaagctcgggagcattctctcctgcgatccgacaggccggcatatgtcacc
atcttgtctcttgttcgcgatgctgcggcccgccttccgaatggagagggtacacgtgct
gaaatctgtgagctgcttaaagattcccagttcctggctcccgatgtcaccagtgcccaa
gttaatacagttgtgagcggtgccctggaccggctacactatgagaaagatccctgtgtg
aaatacgatatcggacgcaaactgtggatatacctgcaccgggacaggagtgaagaggag
tttgaacggattcaccaagctcaagctgctgcagcaaaggccaagaaagccctccagcag
aaaccgaaacctccagccaagacaaagtcgagtagcaaggagagttcagtgaaagtgttc
cccagcagcacttcagagccaagccagctgagcctcagtgactccagtatgccaccaacc
cctgtgactccagtgacacccaccacaccggcattgccagcgacacccatttcacctcct
ccagtctctgtggttagcaagactgttacaagtgttggaccggagccagctaagccaagc
caaagcgttctcttggtgtcctctcctcccatgccccagcttgggacgctgctctccaca
ggtcagagtgcacagccgcaggctgggtcacagccgcctccaaccagggtggtaagccat
actgcctcctcctcaggactcccgcaggtccgtgtggtcactgcgcagtccagcctccca
cctgtgtctcagcaaaccccagtggtaacgcagcagcagcaacctgcatcagtgcctcag
atccgtgcgacagccacacaaacgaaagtaccacctcaggctgttatgaccgtaccagtg
aaagcccaaaccagcccagtgcaagtgcaacggccaggtgcctctgtgacagggcaggca
ggtatcgctgtgacagcactctctgcagcatccagccccactgcaaagccagcaaccagc
tctccaggcagctctgcaccaacctcctcctcttccactactgtcatccagaacgtagct
ggccagaatatccttaagcaggtggctattaccgggcaacttggcatgaagacccaggct
ggaagcggcatcccactcacagctgctaacttccggatccaaggcaaggatgtgctgcgc
ctgcctccctcttccatcaccacggatgccaagggccagacggtgctgcgcatcaccccg
gacatgatggccacccttgccaagtcccaagtcaccacagtcaaattgactcaggacctc
ttcacagcagccgccgggagcagcactagtgggaagggcatctctgcaaccttgcatgtg
acgtccaatcctgtccagtctgctgattccccagccaagactagtacagtcacttctgct
tctcccagccctgctgggaccacggtggttaaagtgacacctgacttaaagactgcggag
tcgaccagttcagctttcagactgatgcccgccctgggcatgactgtggcggatcagaag
ggcaaaaccgtgactacagtggcatccactgaggctaagccagctgccaccataagaatt
gtgcaaggactgggggttatgccgccgaaagcagggcagactattactatggccactcat
accaagcaagtgccctcttcctcttcagtgagcatacctggcacagttcatacctcagct
gtttctttaccgaccatgagtgctgcggtgtccaaggcagttgctgtggcctccggggca
gctggcactccaataaccataggaacaggagccactgctgtgcggcaggtaccagtgagc
accacagtcgtagccacatcccaggcaggtaaactgccagctcgaatcacggtgccgctg
tcagtgatcagccagccggtgaaaggcaagaatgtggtgacagcccccatcatcaaaggc
aacctcggggccaacatcagtggactgggtcggaatatcatcctgacgaccatgccagct
gggacaaaactgattgctgggaataaaccagtgagcttcctgacagctcaacagctacaa
cagctgcagcaacaaggccaggccacgcaggtgcgaattcaaacagtatcggcctcccat
ctccagcagggaacagtgtcaggctctaccaaagcagtctctactgttgttgtgacaaca
gcaccatctccgaaacagacacaggatcaacagtga
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