Caretta caretta (Loggerhead turtle): 125625518
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Entry
125625518 CDS
T09292
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04270
Vascular smooth muscle contraction
ccay04625
C-type lectin receptor signaling pathway
ccay04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125625518 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
125625518 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
125625518 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125625518 (ARHGEF12)
Membrane trafficking [BR:
ccay04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125625518 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Ribonuc_2-5A
Motif
Other DBs
NCBI-GeneID:
125625518
NCBI-ProteinID:
XP_048683628
LinkDB
All DBs
Position
21:complement(11668961..11771185)
Genome browser
AA seq
1567 aa
AA seq
DB search
MQLFFLFCNPVTVFFFLQPLQPYWSKEIAWLRGLCRFPLKKPTRHGSILSRETPADKKQK
VERCSSTHDFDPTDSSSKKTKSSSEESRSETYGLVQRCVIIQRDENGFGLTVSGDNPVFV
QSVKEDGAAMRAGVQTGDRIIKVNGTLVTNSNHGDVVKLIKSGSYVALTVQGRPPGSSQI
PLADSEVDPAVFGHMSPIMTSPHSPGTSGNTERITSPVLMEEENNIVHNQKVEILRKMLQ
KEQERLQSLQEDYSRTPTPRLLKEIQETKKHIPQLQEQLSKATGSTQDGVLSSRSVTESL
QISEVEAESGDGLSKIDYSSGDGSRPNSDIADSPRSGLKERIYLEESPEKSEIQDTDSQS
SIGSPSSRLAPQIIGAEDDDFDAEQEQINGQCSCFQNIELLKSRPAHLAVFLHHVVSQFD
PATLLCYLYTDLYKQTNSKETRRVFLEFNQFFLDRAANLKVPVPDEICIDLEKRRPELIP
EELHRHYIQTMQDKVYPDVQRHLEDFRQKRSMGLTLAENELTKLDAERVRDRITLERERA
CAEQIITKIEEVLMTSQPLEEDKSSTMQYVILTYMKYLGVKVKEPRSLEQKRGRIGFLPK
IKQSIKKEKEGEEKVKRRGFPSILGPPRRPSRHDSSAIGRAMEMQKQRHPKHLSTVSSVS
PEPPDSVKMRQSGSSSDGTDMTCPPANPMSPLAMGPFTSPEGSKDSETGPKQSGDAPPLS
DSVDGAPRTPNTVFDFPSPPLDQLQEEEGELDRLADLGTPKPFRKMDSVGFGDIQSEDEL
FDFDTETDPPNWQQLVSQEVLLGLKPYEIKRQEVINELFYTERAHVRTLKVLHQVFYQRV
FREGILTPSDLRKIFSNLEDILLLHTGLNDQMKAVRKRNETSVIDQIGEDLLTWFSGAGE
ENLKHATATFCSNQPFALEVIKSRQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRL
TKYPLLLDNIAKYSERPEEKEKVKKAADHCRQILNYVNQAVKESENKQHLEDYQRRLDLS
YLKQSEYPMLDEIRNLDLTKRKMIHEGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKL
VLRCHSKILASTSDSKHTFSPVIKLNTVLVRQVATDNKAFFVISMSENGAQIYELVAQTV
SEKTVWQDLIARMAGTVKVEASKRPIPLPQSGPGDEEREEEEQQKLKDEQHDIPVSGMQS
PDKDLVLESPLMLKAQSPSAIMAEKSEVVDLLVTERHFEKEQRAELTLKEPSGHYGPAIP
FQISEERWALDALRNLGLLKQLLVQQLGMPEKGTLEDWQCFPRYRAISRGAQAESGIQHG
LRHSGDKMQQSGTDQRPPGTGTSESAACYGLWTSTEFPAPLDAVQLGSRDTRSSNNLVMD
HVSMNLETPTPELEGVGADDSGEHFFDAREAHSDESPLEGEVMERKEDEEVHLRISGNYL
ILDGYGTVQESSTDEDMSSLVLQCTAGRSSLDSAHQQLISPRDAQSDEGSSLFAEGFMAS
CWGPVDELCSDAPSPHFSVESRVQMMQYIQKIEADLEHLKEVEENYTTLLRQRLAGSAPT
DEHSDKS
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgtttttccttttttgtaacccagttactgtatttttcttcctgcagccgctc
cagccatattggagcaaggagattgcatggttacgtggactgtgcaggtttcctctcaaa
aaacctacaaggcatggcagcattctgagcagagagactccagctgacaagaaacagaag
gttgaacgctgcagtagcacacacgacttcgatccgacagatagctcctccaagaagaca
aagtctagctcggaggagagtagatccgagacgtatggtctcgttcagcgttgtgttatt
atccagcgggatgaaaatggatttgggctgacagttagtggagacaatccagtctttgtg
cagtcagtcaaagaagatggagcagctatgcgggctggagtgcagacaggtgatcgaatc
atcaaggtgaatgggactcttgtaacaaactcaaaccatggggatgtggtgaagctgata
aagtcgggttcctatgtagctctcactgtgcaggggcgcccaccagggtcgtcccagatt
ccattagctgattctgaagtggatccagcagtatttgggcatatgtctcccatcatgaca
tctccccattcgcctggcacatctggaaacacagagaggattactagcccagtgctgatg
gaggaggagaacaatattgttcacaaccagaaagtggagattctgagaaagatgctgcag
aaagagcaggagcggctgcagtccttgcaagaagattacagccgaacacccaccccacga
ctgcttaaggagatacaggaaactaagaagcacatccctcagctgcaagagcagctgtcc
aaagccacaggctctactcaggatggagttttgtcctccagatctgtgacggagtcactg
cagatcagtgaagtagaagcagagagtggggatgggctgagcaaaatagactacagcagt
ggtgatggctcccggccaaacagtgacattgctgatagtccccgcagtggcctgaaggaa
cggatttacctggaggagagtccagagaagagtgagattcaagatactgattctcaatcc
agtattgggagtccctcctcccgcctggcacctcagatcatcggagcagaggatgacgac
tttgacgctgaacaggagcagatcaatgggcaatgcagctgtttccagaacatagagctg
ctgaaatctcgcccggctcacttggctgtgttcctgcatcatgtggtgtcccagtttgac
ccggcaacgctgctctgctatctttacacggacttgtacaaacagaccaactccaaagag
actcgtcgtgtcttccttgagtttaaccagttcttcctggaccgagctgcgaatctgaag
gttcctgttccagatgaaatttgtatagatctagaaaaaagaaggccagaacttattcca
gaggaattgcaccgccattatatccaaactatgcaagataaagtctatccagatgtccag
aggcatctggaagatttcagacagaagcgtagcatgggattgacgctggccgaaaatgaa
ctgaccaagctggatgcagaacgtgtccgtgaccggatcacgctggagagagagagagcg
tgtgcagagcagataattaccaaaatcgaggaggtgttgatgacttctcagcctctggaa
gaggacaagagttcaaccatgcagtatgtgattctcacctacatgaaatatctgggcgtg
aaagtcaaggagccccggagcttggagcagaagcgtggacgtattggtttcctgccaaag
ataaagcaaagtataaagaaagagaaagaaggggaggaaaaagtgaagaggagaggcttc
cccagtatcctgggacccccaaggagacccagtcgccatgacagcagtgcaattggcagg
gccatggaaatgcagaagcagcgccatccaaagcacttatccacagtctcttcagttagt
ccagagccaccagactctgtcaagatgcgccagagtgggtcctctagcgatggcacagac
atgacatgccctcctgccaatcccatgtctcctttagctatggggccctttacctccccg
gagggaagcaaggacagcgagacaggccccaagcagtctggagatgctccacctcttagt
gactctgtggatggcgcaccccgcacccctaacaccgtctttgatttcccatcccctccg
ctggaccagctgcaagaggaggaaggagaacttgatagattagctgacttggggacacca
aaacctttccgaaagatggacagtgtgggctttggggatattcagagtgaggatgagctg
tttgattttgacactgagactgatcctcccaactggcagcagctggtgagccaagaggtg
ctgctggggctgaaaccctatgaaatcaaacgccaagaagtgattaatgagctgttctac
actgagcgagctcacgtccgcactctgaaggttctgcatcaggtcttctaccagcgtgta
ttccgtgaaggcatcctgaccccctccgacctgcgcaaaatcttttcaaacctagaggat
atccttctgctccacactggtttgaatgatcagatgaaagctgtccgtaaacggaatgag
acctctgttattgatcagattggggaagacttgctaacctggttcagtggagcaggagag
gagaacctgaaacacgcaactgccaccttttgtagtaaccagccttttgctctagaggtg
atcaaatcacggcagaagaaagactctcgcttccaaacctttgtgcaggatgctgagagc
aatccactgtgtcgccggttgcagttgaaagatatcattcccactgagatgcagaggctg
actaagtacccccttctgctggataatatcgctaagtactcagaacggcctgaggagaag
gagaaagtgaagaaagcagcagatcactgccgtcagatccttaactatgtgaaccaggct
gtcaaagaatcggagaataagcagcatttggaagattatcagcgtcgccttgacctgtcc
tacttgaagcagtcggagtaccctatgctggatgagattaggaacttggatttaaccaag
aggaagatgattcacgaaggacctctgacctggaaggttaatcgggacaagactattgat
ctctacacactgctcttggaggatattctagtgctgttgcaaaagcaagacgataaactg
gtgctgaggtgtcacagtaagattctggcatccacttctgacagcaaacacacattcagt
cctgttatcaagctgaacactgtgctggttcgccaggtggcgacagataacaaagctttc
ttcgtcatctccatgtccgaaaacggcgcccagatttatgaattggtggcacagacagtt
tctgaaaagactgtatggcaggacctgatcgctcggatggcagggacagtaaaagtcgag
gcatctaaaaggcccattccattaccacaatcaggacctggcgacgaggagcgtgaggaa
gaggagcagcagaagctgaaagacgaacagcatgatatccctgtcagtggtatgcagagt
ccagataaagatttggtacttgagtctcccttgatgctgaaggctcagtctccttcagca
atcatggctgagaagtcggaggtggtagatcttcttgtgactgaaagacattttgagaaa
gagcaacgggcagaactgactctcaaagaaccctctgggcactatggaccagcgatccct
ttccagatctcagaagagcggtgggcactggatgcactaagaaacttgggcttgctgaag
cagttgttggtgcagcagctgggcatgcctgagaaggggacccttgaagactggcaatgt
tttcccaggtatagggccatttcccggggggcccaggcagagagtgggatccagcatgga
ctacggcattctggtgacaagatgcagcagtctggaacggaccagaggcctcccggaaca
ggaactagtgaatccgcagcttgttatggtctctggacttcaaccgagtttccagctcca
ctggatgctgtgcagctggggtctagagacaccaggtctagtaacaatttagtaatggac
catgtgagcatgaacctggagacccctaccccggagctggaaggggtgggcgctgatgac
agcggagagcacttctttgatgctcgtgaggcccacagcgatgagagtccattggaaggt
gaagtaatggagaggaaggaggatgaggaggtgcacttacggatctcaggaaattatttg
atccttgatgggtatggaaccgtgcaggagagctctacagatgaggacatgtcctctcta
gttctacagtgcactgcgggccgctcctctttggactcagcacaccagcagctgatttcc
ccacgagatgcccagtccgatgaagggagctccctgtttgccgagggattcatggcctcg
tgctgggggccagtggacgaattgtgctccgatgcaccgagcccccacttctccgtagag
tcgcgtgtccaaatgatgcagtacattcagaagatagaggctgaccttgaacacttaaag
gaagttgaggaaaattacaccactctccttcgccaaaggctggctggctcagcccccaca
gatgagcattcagacaaaagttag
DBGET
integrated database retrieval system
