Caretta caretta (Loggerhead turtle): 125626292
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Entry
125626292 CDS
T09292
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125626292 (TIA1)
03041 Spliceosome [BR:
ccay03041
]
125626292 (TIA1)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125626292 (TIA1)
Spliceosome [BR:
ccay03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125626292 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Nup35_RRM_2
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
125626292
NCBI-ProteinID:
XP_048685011
LinkDB
All DBs
Position
23:11791650..11816105
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AA seq
384 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFIRFNSHESAARAIVSVNGTALEGHVVKCYWGKETPDMINPIQQNQIG
YPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTQSSAAWMGANYGVP
PPQGQNGSVLTNQTGYRMAGFETQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaaatgcccaagaccctatatgttgggaacctgtcaagagatgtgactgag
gcactaatcctccagctgtttagccagattggaccatgcaaaaactgcaaaatgatcatg
gatacagctggaaatgatccatactgttttgtggagttttatgagcatcgtcacgcggct
gcagcgttagctgctatgaatggacggaagataatgggtaaggaggtcaaagtgaactgg
gcaacaacccccagcagccagaagaaagataccagcagtagtaccgttgtcagcacactg
cgttcacaagaccatttccatgtctttgttggagacctcagtccagaaattacaactgaa
gatataaaagcagcttttgcaccatttggaagaatatcagatgcacgagtggttaaagat
atggcaacagggaaatccaaaggatatggctttgtttccttcttcaataaatgggatgca
gaaaatgctattcagcagatgggtggacagtggcttggtggaagacaaatcagaactaac
tgggcaacacgaaaacctccagctccaaagagtacatatgaatcaaacaccaaacagctg
tcttacgatgatgttgtaaatcagtccagcccaagcaactgcactgtatattgtggtggt
gttacttcaggactaacagaacagctaatgcgccagaccttttctccgtttgggcagata
atggaaattcgagtcttcccagacaaagggtactcttttatacgcttcaattctcatgaa
agcgcagcacgtgcaattgtttctgtcaatggaacggctctagaagggcacgttgtgaaa
tgctactggggcaaagaaacaccagatatgatcaatccaatccagcagaatcaaattgga
tatccacaggcttatggccagtggggccagtggtatggaaatgcacagcaaattggtcag
tacatgcctaatggttggcaagtccctgcatatggaatgtatggacaggcatggaatcag
cagggatttaatcagacacagtcttctgccgcatggatgggtgcaaattatggagttccg
ccacctcaggggcagaatggaagtgtgttaactaatcaaactggatatcgcatggcaggt
tttgaaactcagtga
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