KEGG   Caretta caretta (Loggerhead turtle): 125626300
Entry
125626300         CDS       T09292                                 
Symbol
POLB
Name
(RefSeq) DNA polymerase beta isoform X1
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125626300 (POLB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccay03400]
    125626300 (POLB)
Enzymes [BR:ccay01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     125626300 (POLB)
DNA repair and recombination proteins [BR:ccay03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     125626300 (POLB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     125626300 (POLB)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f HHH_8 DNA_pol_B_thumb HHH_5 NTP_transf_2 Cdd1 IMS_HHH_1 DUF3900
Other DBs
NCBI-GeneID: 125626300
NCBI-ProteinID: XP_048685038
LinkDB
Position
23:99864..147835
AA seq 376 aa
MHCISSFLPRVWGSGRRSPRLIRSSFPSSYPAWQLPGTEAAMSKRKAPQESPNAGITDFL
SELANYERNVNRAIHKYNAYRKAASVISKYPSKIKSGAEAKKLEGVGAKIADKIDEFLST
GKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKLVDEGIKTLEDLRKNEHKLNHHQRIG
LKYFEDFEKRIPREEMLQMQEIVLKEVKKLDPEYIATVCGSFRRGAESSGDMDILLTHPS
FTSESTKQPKLLHQVVEQLKKIHFVTDTLSKGDTKFMGVCQLTSEEDGTNYPYRRIDIRL
IPKDQYYCGVLYFTGSDIFNKNMRTHALEMGFTINEYTIRPLGVTGVAGEPLPVESEKDI
FDYIQWKYREPKERSE
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgcactgcatctcgtcctttctgccccgcgtgtgggggtcggggaggaggagtccgcgg
ttaatccgctcctccttcccctcatcctacccggcctggcagctgcctgggaccgaggcc
gccatgagcaagcggaaggcgccgcaggagagccccaacgcggggatcacggacttcctg
agtgagctggcgaactacgagaggaacgtgaacagagccatccacaagtacaacgcgtac
agaaaagcagcttctgtaatatccaagtatccaagcaagataaaaagtggagctgaagca
aagaagctggaaggagtaggggctaaaatagctgacaagatcgatgagtttttatccact
ggaaaactacgtaagcttgaaaagattcgacaggatgatacaagctcatctatcaatttc
ttgacccgagttagtggcataggcccttctgcagctaggaagcttgtagatgaagggata
aagacattggaagatctaaggaaaaatgaacacaagctgaatcatcatcagcgaattggg
ctaaaatattttgaagactttgagaaaagaatccctagagaagagatgttacagatgcag
gaaattgtattgaaagaggttaagaaactggaccccgaatatattgctacagtctgtggc
agtttcaggcgaggtgcggaatcaagtggggatatggatattctcctgacccatccaagt
tttacttctgaatcgaccaaacagccaaagcttttgcaccaagttgtagaacaattgaaa
aaaatccactttgtcactgacacattgtcaaagggtgatacgaaattcatgggtgtatgt
cagttgacaagcgaagaagatggaaccaattatccatacaggagaatcgatatcaggctg
atccccaaggatcagtattattgtggagtactgtacttcacaggcagtgacatattcaat
aagaacatgagaactcatgccctagaaatgggcttcacaatcaacgagtacacaatccgg
cccttgggagttactggagttgctggggagcccctcccagtagagagtgaaaaggatatc
tttgactacatacagtggaagtatcgagagccaaaagaacggagtgaataa

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