Caretta caretta (Loggerhead turtle): 125626558
Help
Entry
125626558 CDS
T09292
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125626558 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125626558 (SMARCD2)
03036 Chromosome and associated proteins [BR:
ccay03036
]
125626558 (SMARCD2)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125626558 (SMARCD2)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125626558 (SMARCD2)
PBAF complex
125626558 (SMARCD2)
GBAF(ncBAF) complex
125626558 (SMARCD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIFT
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
125626558
NCBI-ProteinID:
XP_048685602
LinkDB
All DBs
Position
24:complement(12826519..12862782)
Genome browser
AA seq
501 aa
AA seq
DB search
MSGRGAFPLSPLTPAPGAAPPPSAPGPGLMRGASPAGVGAAGYRPMGPAVVQYQRPGMPP
GSRMPMAGLQVGSPSGPPYGAVSPMRPGMPQSIMDPFRKRLLAPQSQPPLANQRRGLKRR
KMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYI
SNTFTPGKEEGDGSERVASWELRVEGKLLEDPSKQKRKFSSFFKSLVIELDKELYGPDNH
LVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAS
IMQALWLYIKHNKLQDSHEKEYINCNRYFRQIFSCIRMRFSEIPMKLAGLLQHPDPIIIN
HMISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDTKIHETIESINQL
KTQRDFMLSFSNNPQDFIQEWIKSQRRDLKIITDVIGNPEEERRADFYHQPWAQEAAGRH
IFAKVQQRRQELEQVLGIRLT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccgcggcgcgttcccgctcagccccctgacccccgcccccggggccgcgccg
cccccttccgccccggggcccggcctcatgcggggcgcgagcccggccggagtgggggcc
gctggataccggcccatggggcccgccgtcgtccagtaccagcgtcccgggatgccaccg
gggagccggatgcccatggcaggattgcaggtgggatccccttcaggacccccctatgga
gcagtctctccgatgcgaccaggaatgccacagtccattatggaccccttcagaaagcgc
ctgcttgctccgcagtcgcagccacccctggcaaaccaaaggcgagggctgaaaagaagg
aagatggcggacaaggtcctaccacagaggatccgggagctggtcccagagtctcaggcc
tacatggaccttctcgcctttgagcgcaagctggatcagaccattgcccggaagagaatg
gaaatccaggaggccatcaagaaacccctcacgcaaaagcggaagctgcgaatttacatc
tccaacaccttcaccccaggcaaggaggagggggacggcagcgagcgcgtggcctcgtgg
gagctgcgagtggaaggcaagctcctggaggatccgagcaagcagaagaggaagttctcc
tcctttttcaagagcctcgtcatcgaactggacaaggagctgtatggaccagacaaccat
ttggtggagtggcacaggatgcccacgacccaagagacggacggcttccaggtcaagcgc
cctggtgatgtcaatgtgaaatgcaccctgctgctcatgctggatcaccagcctccacag
tacaaactggatcctcgcctggctcgcctgctgggtgtccacacccagacccgggccagc
atcatgcaggccctgtggctctacatcaaacacaacaagctgcaggacagccacgagaag
gagtacatcaactgcaaccgatacttccgccagatcttcagctgcattcgcatgcgattc
tccgagatccccatgaagttggcaggcctgctgcagcatccggatcccatcatcatcaac
cacatgatcagcgtggatcccaacgaccagaagaagactgcctgctatgacatagatgtc
gaggtggatgaccccctgaaagctcagatgagcaacttcctggcctctaccaccaaccag
caggaaatcgcctccctggataccaagatccacgagaccattgagtccattaaccagctg
aagacacagcgagatttcatgctgagcttcagtaacaacccgcaggacttcattcaggaa
tggatcaaatcccagaggagggacctcaagatcataacggacgtgattgggaaccccgaa
gaggagagacgagctgacttctaccatcagccctgggcacaggaggctgcggggaggcac
atctttgccaaggttcagcagcgcagacaggaactggaacaagtgcttgggattcgcctc
acctaa
DBGET
integrated database retrieval system
