KEGG   Caretta caretta (Loggerhead turtle): 125626880
Entry
125626880         CDS       T09292                                 
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    125626880 (HDAC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccay03036]
    125626880 (HDAC5)
Enzymes [BR:ccay01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     125626880 (HDAC5)
Chromosome and associated proteins [BR:ccay03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     125626880 (HDAC5)
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln TFIIA
Other DBs
NCBI-GeneID: 125626880
NCBI-ProteinID: XP_048686363
LinkDB
Position
24:complement(7864074..7970577)
AA seq 1168 aa
MLLLVAGPEGASGASCKDGGEAERALKEPERGAAGSLAEVGQSQRREGAPSPAGPSCSHP
LWPPPRGSSAADGVSGREQSLERLSRTRIHGLPVAAVDVKPALPVAMPNSCGAGGPAALR
PEARGGAPSVDPSLREQQLQQELLALKQQQQLQKQLLFAEFQKQHEHLTRQHEVQLQKHL
KQQQEMLAAKRQQELEQQRKREQLRQEELEKQRLEQQLLILRNKEKSKESAIASTEVKLK
LQEFLLSKSKEVTAGSFNHSLPQHSKCWGAHHTSLDQSSPPQTGSPGTPPSYKLPLLGTY
DSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAIEITVSSVC
NSAPGSGPSSPNSSNSTIAENGFAGSAPNIHTEQLLPQHRALAMDGSASQLSLYTSPSLP
NISLGLQATVTVTNSHLNASPKLSTQQEAERHAIQSLRQGGALTGKFMSTSSIPGCLLGV
ALEGETNSHGHASLLQHVLLLEQARQQNTLIAVPLHGQSPLVTGERGPTSMRTVSKLPRH
RPLSRTQSSPLPQSPQALQQLVIQQQHQQFLEKQKQQQQIQLGKIITKTGELPRPPTTHP
EETEEELTEQQEALLEDRVPLGPVALVVDGSPESESTQDELEEDEGGEPVKDDGGASGDE
EEPIDSPEVEELGMAYKQVFPDAQQLQPIQLFPASLTIATLPHQALSRTQSSPATAGIKT
TTAEPPVKHLFTTGVIYDTFMLKHQCMCGNTNIHPEHAGRIQSIWSRLQETGLLSKCERI
RGRKATLDEIQTVHSEHHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDT
VWNEMHSSSAVRMAVGCLVELAFKVASGELKNGFAVIRPPGHHAEESTAMGFCFFNSVAI
AAKLLQQKLSVGKILIVDWDIHHGNGTQQAFYSDPNVLYISLHRYDNGNFFPGSGAPEEV
GSGMGVGYNINIAWTGGVDPPIGDVEYLAAFRTVVMPIANEFSPDVVLVSAGFDAVEGHL
SPLGGYSVTAKCFGHLTKQLMKLAGGRVVLALEGGHDLTAICDASEACVSALLGVELEPL
DQALLQQKPNVNAVATLEKIIEIQSKHWSSVNRCASVVSCSLLEAQKGEAEEAETVSAMA
LLSVDAEQGSTDCSPRQVEEPMEAEPVL
NT seq 3507 nt   +upstreamnt  +downstreamnt
atgttgttgttggtggcggggccggagggagcgagcggagccagctgcaaagatggagga
gaggcggagcgggcgctgaaggagccggagcggggggcagccggatccctggcggaggtg
gggcagagccagcgcagggagggggccccgagcccggctgggcccagctgcagccacccc
ctctggccccccccccggggcagcagcgctgcagatggggtatccggacgcgagcaatcg
ctggagcgcctttcgcggactcggatccatggccttcccgtggcagcggtcgacgtgaag
ccggcgctgcccgtggccatgccgaactcctgcggcgccggcggcccggcggccctgcgg
ccggaggcccggggcggtgcgcccagcgtggacccctccctgcgggagcagcagctgcag
caggagctgctggccctgaagcagcagcagcagttgcagaagcagctgctcttcgccgag
ttccagaagcagcatgagcacctgacgcggcagcacgaggtccagctgcagaagcacctc
aagcagcagcaggagatgctggcagcgaagcggcagcaggagctggagcagcagcgaaag
cgggagcagctgcggcaggaggagctggagaagcagcggctggagcagcagctcctcatc
ctccggaacaaggagaagagcaaagagagtgcaattgccagcacagaagtgaagctaaag
ctccaggagttcctactcagcaagtcaaaagaggtgacggcaggcagcttcaaccattcc
ctcccacagcactccaaatgctggggagcccatcatacctcgttggaccagagttcccct
ccccagacaggcagcccgggaacaccaccctcctacaaactacccctactcggcacatac
gacagcagagatgactttccgctccggaaaaccgcctcggaacccaacttaaaagtgcgc
tcgcggttaaaacagaaggtggccgagcgcaggagcagccccctgctgcggaggaaagac
gggaccgtcatcagcacgttcaaaaagagagccatcgagatcacggtctcctccgtgtgc
aacagtgccccagggtccggtcccagctccccgaacagctccaacagcaccatcgctgag
aatggcttcgctggctctgcccccaacatccacaccgagcagctgctcccccagcacaga
gccctggcaatggacgggtccgctagccagctcagcctctatacctccccgtcactgccc
aacatctccctgggactgcaggcaacggtcaccgtgaccaactcgcacctcaacgcttcc
ccgaagctctccacccagcaggaggcagagcgccacgccatccagtcgctgcgccagggc
ggggccctcacgggcaagttcatgagcacctcgtccatccccggctgcctgctgggggtc
gccctggagggcgagaccaacagccacgggcacgcctccctgctgcagcacgtgctgctc
ctggagcaggcccgccagcagaacacgctgatcgccgtgccgctccacggccagtccccg
ctggtgacgggcgagcgcggccccaccagcatgcggacggtcagcaagctgccccggcac
cgcccgctgagccgcacccagtcgtccccgctgccccagagcccccaggccctgcagcag
ctggtcatacagcaacagcatcagcagttcctggagaagcagaaacagcagcagcagatc
cagcttggcaagatcatcaccaagacgggcgagctgccccgcccgcccaccacgcacccc
gaggagacggaggaggagctgacggagcagcaggaggcgctgctggaggacagggtgccc
ctggggccggtggccttggtggtggacggctcgccggagagcgagagcacgcaggacgag
ctggaggaggacgagggcggcgagccggtgaaggacgacgggggcgcgagcggggatgaa
gaagagcccatcgactcaccggaggtggaggagctgggcatggcttacaagcaggtgttc
ccagacgctcagcagctgcagcccatccagctcttcccagcttccctgacaattgccacc
ctgcctcaccaagcgctgagccggacccagtcctcgcctgccaccgcgggcataaagacc
actacggctgaacccccggtcaaacacctattcactaccggcgtgatctacgacacgttc
atgctaaagcatcagtgtatgtgcgggaacactaatattcacccagagcatgctgggaga
atccagagcatctggtccaggctccaggagaccggcttgctgagcaagtgcgagaggatc
cggggcaggaaagcaacgctggatgaaatccagacggtccattcggagcatcacacgttg
ctctatggaaccagccccctcaaccggcagaaactcgacagcaagaagctgctaggtccc
atcagccagaagatgtatgcggtcctgccctgtggcggcatcggggtggacagcgacacg
gtgtggaacgagatgcactcgtccagcgccgtccgcatggccgtgggctgcttggtggag
ttagccttcaaggtggcctcgggagagctcaagaatggattcgccgtcatccggcccccg
gggcaccacgcggaggaatcgacggccatgggcttctgcttcttcaattccgtcgcgatc
gctgccaaactcctccagcagaagctaagcgtcggcaagatcctcattgtggactgggac
attcaccacggcaacggcacccagcaagccttctacagtgaccccaacgtgctgtacatc
tccctgcaccgctacgacaatggcaacttcttcccaggcagcggggcccccgaggaggtt
ggcagcgggatgggggtggggtacaacatcaacatagcctggacagggggagtggacccc
cccatcggagacgtggagtacctggccgcgttcaggacggtggtgatgccgatagccaac
gagttctccccggacgtggtcctggtctctgccggcttcgacgcagtcgagggacacctg
tctcccttgggcggctactccgtcacggcgaaatgtttcggacacctgaccaagcagctg
atgaagctggctggcgggcgcgtggtgctggctttggagggaggacacgacctgacagcc
atctgcgacgcctcagaagcctgtgtctccgccctgcttggcgtggagctggaacccctg
gatcaagctctcctgcagcaaaagccaaatgtaaatgccgtggccacgctggagaagatt
attgaaatccagagcaaacactggagctctgtgaaccgctgtgcctcagtggtcagttgt
tccttgctggaggcgcagaagggagaagccgaggaggcagagacagtaagtgccatggca
ttgctctcggtcgatgccgaacaaggaagcacagactgcagccccagacaagtggaggag
ccgatggaggcggagcctgttttgtga

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