KEGG   Caretta caretta (Loggerhead turtle): 125627166
Entry
125627166         CDS       T09292                                 
Symbol
MEX3D
Name
(RefSeq) RNA-binding protein MEX3D
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
ccay  Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccay03019]
    125627166 (MEX3D)
   04121 Ubiquitin system [BR:ccay04121]
    125627166 (MEX3D)
Enzymes [BR:ccay01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     125627166 (MEX3D)
Messenger RNA biogenesis [BR:ccay03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     125627166 (MEX3D)
Ubiquitin system [BR:ccay04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    125627166 (MEX3D)
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 KH_2 RING_XB3-XBAT31 KH_DEAH11_2nd zf-C3HC4
Other DBs
NCBI-GeneID: 125627166
NCBI-ProteinID: XP_048686985
LinkDB
Position
25:12550840..12572550
AA seq 620 aa
MPGSVYQPDGGEAAGCPAPCLGLLSAPPPPPPGQPAHEEPPRLEPEPERGGQQPLPDQED
AAAALRFALDQLSILGLEEAAAAAEERVTEEGGVEEEEEVLEIGDGGLDDMDHGSGLDRG
VGMLGGLPMLDPDVSPPTSSTTSPPDVFSNFHPHLGHHHSILAEQMSIIGSRKKSVNMTE
CVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPIFIVTGRKEDVEMAKREIL
SAAEHFSMIRATRNKVNGLTGTVQGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQ
QTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHITMRTGSFIDVNADNDFHSNGTDV
CLDLLGSTASLWAKAPNPARRPSAGLRNDSLSSLGSTSTESYYGGRVADASPTSPYSTSS
GFNFSEPQAPPLSSEDADFGFDFLALDLTTPTTIWSPFERSNPLQAFSSCSSINGSQRRN
SSISGTATPRHSPTLPESSVALDHPLARRIQSDPVSTLSWLPTQGSLSSFSNSTGYSSSS
SLPGSISGTSGSPTDSSSSDGHRKSSRECMVCFESEVIAALVPCGHNLFCMECAIRICGK
AEPECPACHTPATQAIHIFS
NT seq 1863 nt   +upstreamnt  +downstreamnt
atgcccggctccgtctaccagcccgacggcggggaggcagccggctgccccgcgccctgc
ctggggctgctgagcgccccgccgccgccgccgcccgggcagccggcgcacgaggagccg
ccgcggctggagcccgagccggagagaggcgggcagcagcccctgcccgaccaggaagac
gcggcggccgcgctgcggtttgccctggaccagctctccatcttgggcttggaggaggcg
gcggcagcagcagaagaaagggtgactgaagaaggaggagtggaggaggaggaggaggtg
ctggagattggggatggagggctggatgacatggaccacggctcagggctggacagggga
gtggggatgctgggggggctgccaatgctggatccagatgtgagcccccccacctccagc
accacttcccctccagatgtgttcagcaactttcacccccacctgggccaccaccactcc
atcttggctgagcagatgagcatcattggaagcagaaagaagagcgtgaacatgactgag
tgcgtccctgtccccagctctgaacatgtagcggagattgtggggagacaaggctgtaag
atcaaagccctgcgtgctaaaaccaacacctacatcaagacgccagtcagaggagaggag
cccatcttcatcgtgactgggaggaaagaggatgtggaaatggccaagagggagatcctc
tcggctgctgaacacttctccatgatccgagcaactcgcaacaaggtcaacggcctgacg
ggaaccgtgcagggtccccccaacctgccagggcagaccaccatccaggtgagagtcccc
taccgtgtggtgggcctggtggtggggcccaagggggccaccatcaagagaatccagcag
cagacgcacacgtacattgtcacgccgagccgagacaaagagcccgtctttgaggtgacg
gggatgcccgagaacgtggaccgggcccgggaggagattgaagcccacatcaccatgagg
acaggctccttcatagacgtcaacgcagacaacgacttccactccaatggcaccgacgtc
tgcctcgacctgctgggcagcacggccagcctttgggccaaagcccccaaccctgcccgc
aggccctcggccggccttcgcaacgacagcctgagctccctgggcagcacctccaccgag
tcctactacggtggccgggtggccgacgccagccccaccagcccgtacagcaccagcagc
ggcttcaacttcagcgagccccaggcgccaccgctcagctccgaagacgctgactttggc
ttcgatttcctggccctggacctcaccacgcccaccaccatctggtctccctttgagcgc
tccaaccccctgcaggccttcagcagctgctcctccatcaacggctcgcagagacgtaac
agcagcatcagcgggacagccacgccccggcactccccgaccctcccagagagcagcgtt
gccctggaccaccccctagcccgccgcatccagagcgacccggtcagcaccttgtcctgg
ctgcccacccagggctcgctctcctccttctccaacagcacaggctactcctcctcctct
tccctgccgggcagtatctctggcacctcaggctcccccacagattccagcagctctgac
gggcaccggaagagctcccgggagtgcatggtgtgtttcgaaagcgaggtcattgctgcc
ctggtgccctgcggccacaacctcttctgcatggagtgcgccatccgcatctgcggcaaa
gccgagccggagtgccctgcctgccacaccccagccactcaagccatccacatcttctcc
tag

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