Caretta caretta (Loggerhead turtle): 125627166
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Entry
125627166 CDS
T09292
Symbol
MEX3D
Name
(RefSeq) RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125627166 (MEX3D)
04121 Ubiquitin system [BR:
ccay04121
]
125627166 (MEX3D)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125627166 (MEX3D)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125627166 (MEX3D)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125627166 (MEX3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
KH_2
RING_XB3-XBAT31
KH_DEAH11_2nd
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
125627166
NCBI-ProteinID:
XP_048686985
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All DBs
Position
25:12550840..12572550
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AA seq
620 aa
AA seq
DB search
MPGSVYQPDGGEAAGCPAPCLGLLSAPPPPPPGQPAHEEPPRLEPEPERGGQQPLPDQED
AAAALRFALDQLSILGLEEAAAAAEERVTEEGGVEEEEEVLEIGDGGLDDMDHGSGLDRG
VGMLGGLPMLDPDVSPPTSSTTSPPDVFSNFHPHLGHHHSILAEQMSIIGSRKKSVNMTE
CVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPIFIVTGRKEDVEMAKREIL
SAAEHFSMIRATRNKVNGLTGTVQGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQ
QTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHITMRTGSFIDVNADNDFHSNGTDV
CLDLLGSTASLWAKAPNPARRPSAGLRNDSLSSLGSTSTESYYGGRVADASPTSPYSTSS
GFNFSEPQAPPLSSEDADFGFDFLALDLTTPTTIWSPFERSNPLQAFSSCSSINGSQRRN
SSISGTATPRHSPTLPESSVALDHPLARRIQSDPVSTLSWLPTQGSLSSFSNSTGYSSSS
SLPGSISGTSGSPTDSSSSDGHRKSSRECMVCFESEVIAALVPCGHNLFCMECAIRICGK
AEPECPACHTPATQAIHIFS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctccgtctaccagcccgacggcggggaggcagccggctgccccgcgccctgc
ctggggctgctgagcgccccgccgccgccgccgcccgggcagccggcgcacgaggagccg
ccgcggctggagcccgagccggagagaggcgggcagcagcccctgcccgaccaggaagac
gcggcggccgcgctgcggtttgccctggaccagctctccatcttgggcttggaggaggcg
gcggcagcagcagaagaaagggtgactgaagaaggaggagtggaggaggaggaggaggtg
ctggagattggggatggagggctggatgacatggaccacggctcagggctggacagggga
gtggggatgctgggggggctgccaatgctggatccagatgtgagcccccccacctccagc
accacttcccctccagatgtgttcagcaactttcacccccacctgggccaccaccactcc
atcttggctgagcagatgagcatcattggaagcagaaagaagagcgtgaacatgactgag
tgcgtccctgtccccagctctgaacatgtagcggagattgtggggagacaaggctgtaag
atcaaagccctgcgtgctaaaaccaacacctacatcaagacgccagtcagaggagaggag
cccatcttcatcgtgactgggaggaaagaggatgtggaaatggccaagagggagatcctc
tcggctgctgaacacttctccatgatccgagcaactcgcaacaaggtcaacggcctgacg
ggaaccgtgcagggtccccccaacctgccagggcagaccaccatccaggtgagagtcccc
taccgtgtggtgggcctggtggtggggcccaagggggccaccatcaagagaatccagcag
cagacgcacacgtacattgtcacgccgagccgagacaaagagcccgtctttgaggtgacg
gggatgcccgagaacgtggaccgggcccgggaggagattgaagcccacatcaccatgagg
acaggctccttcatagacgtcaacgcagacaacgacttccactccaatggcaccgacgtc
tgcctcgacctgctgggcagcacggccagcctttgggccaaagcccccaaccctgcccgc
aggccctcggccggccttcgcaacgacagcctgagctccctgggcagcacctccaccgag
tcctactacggtggccgggtggccgacgccagccccaccagcccgtacagcaccagcagc
ggcttcaacttcagcgagccccaggcgccaccgctcagctccgaagacgctgactttggc
ttcgatttcctggccctggacctcaccacgcccaccaccatctggtctccctttgagcgc
tccaaccccctgcaggccttcagcagctgctcctccatcaacggctcgcagagacgtaac
agcagcatcagcgggacagccacgccccggcactccccgaccctcccagagagcagcgtt
gccctggaccaccccctagcccgccgcatccagagcgacccggtcagcaccttgtcctgg
ctgcccacccagggctcgctctcctccttctccaacagcacaggctactcctcctcctct
tccctgccgggcagtatctctggcacctcaggctcccccacagattccagcagctctgac
gggcaccggaagagctcccgggagtgcatggtgtgtttcgaaagcgaggtcattgctgcc
ctggtgccctgcggccacaacctcttctgcatggagtgcgccatccgcatctgcggcaaa
gccgagccggagtgccctgcctgccacaccccagccactcaagccatccacatcttctcc
tag
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